RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 CSTAP01040 98 aa12.74□□□□□ -0.37
HIPK3-202ENST00000379016 MMP3P08254 477 aa12.74□□□□□ -0.37
HIPK3-202ENST00000379016 ADH5P11766 374 aa12.74□□□□□ -0.37
HIPK3-202ENST00000379016 EARS2Q5JPH6 523 aaKnown RBP12.74□□□□□ -0.37
HIPK3-202ENST00000379016 LPCAT3Q6P1A2 487 aa12.74□□□□□ -0.37
HIPK3-202ENST00000379016 BAGE3Q86Y29 109 aa12.74□□□□□ -0.37
HIPK3-202ENST00000379016 BAGE2Q86Y30 109 aa12.74□□□□□ -0.37
HIPK3-202ENST00000379016 PAPD5Q8NDF8 572 aaKnown RBP12.74□□□□□ -0.37
HIPK3-202ENST00000379016 H1FXQ92522 213 aaKnown RBP12.74□□□□□ -0.37
HIPK3-202ENST00000379016 KCNJ16Q9NPI9 418 aa12.74□□□□□ -0.37
HIPK3-202ENST00000379016 RXFP3Q9NSD7 469 aa12.74□□□□□ -0.37
HIPK3-202ENST00000379016 OR2M5A3KFT3 312 aa12.74□□□□□ -0.37
HIPK3-202ENST00000379016 VSTM2BA6NLU5 285 aa12.74□□□□□ -0.37
HIPK3-202ENST00000379016 PRKACAP17612 351 aa12.74□□□□□ -0.37
HIPK3-202ENST00000379016 TOB1P50616 345 aaPredicted RBP12.74□□□□□ -0.37
HIPK3-202ENST00000379016 RPL23AP62750 156 aaKnown RBP12.74□□□□□ -0.37
HIPK3-202ENST00000379016 C1orf52Q8N6N3 182 aaKnown RBP12.74□□□□□ -0.37
HIPK3-202ENST00000379016 DIO2Q92813 273 aa12.74□□□□□ -0.37
HIPK3-202ENST00000379016 P2RY13Q9BPV8 354 aa12.74□□□□□ -0.37
HIPK3-202ENST00000379016 SYNPO2LQ9H987 977 aa12.74□□□□□ -0.37
HIPK3-202ENST00000379016 STXBP5LQ9Y2K9 1186 aa12.74□□□□□ -0.37
HIPK3-202ENST00000379016 LRP5LA4QPB2 252 aa12.74□□□□□ -0.37
HIPK3-202ENST00000379016 AMY2AP04746 511 aa12.74□□□□□ -0.37
HIPK3-202ENST00000379016 DMWDQ09019 674 aa12.74□□□□□ -0.37
HIPK3-202ENST00000379016 SPIN4Q56A73 249 aa12.74□□□□□ -0.37
HIPK3-202ENST00000379016 TMEM201Q5SNT2 666 aa12.74□□□□□ -0.37
HIPK3-202ENST00000379016 INTS5Q6P9B9 1019 aaKnown RBP12.74□□□□□ -0.37
HIPK3-202ENST00000379016 OVCH1Q7RTY7 1134 aa12.74□□□□□ -0.37
HIPK3-202ENST00000379016 PM20D2Q8IYS1 436 aa12.74□□□□□ -0.37
HIPK3-202ENST00000379016 RPLP0P6Q8NHW5 317 aa12.74□□□□□ -0.37
HIPK3-202ENST00000379016 KCNIP2Q9NS61 270 aa12.74□□□□□ -0.37
HIPK3-202ENST00000379016 hCG_1818297A0A087WSY0 165 aa12.74□□□□□ -0.37
HIPK3-202ENST00000379016 OR7A17O14581 309 aa12.74□□□□□ -0.37
HIPK3-202ENST00000379016 NRP1O14786 923 aa12.74□□□□□ -0.37
HIPK3-202ENST00000379016 CDK1P06493 297 aa12.74□□□□□ -0.37
HIPK3-202ENST00000379016 NDUFS1P28331 727 aa12.74□□□□□ -0.37
HIPK3-202ENST00000379016 CLCNKBP51801 687 aa12.74□□□□□ -0.37
HIPK3-202ENST00000379016 F2RL1P55085 397 aa12.74□□□□□ -0.37
HIPK3-202ENST00000379016 RAB11BQ15907 218 aa12.74□□□□□ -0.37
HIPK3-202ENST00000379016 TREML2Q5T2D2 321 aa12.74□□□□□ -0.37
HIPK3-202ENST00000379016 TANGO2Q6ICL3 276 aa12.74□□□□□ -0.37
HIPK3-202ENST00000379016 SSX7Q7RTT5 188 aa12.74□□□□□ -0.37
HIPK3-202ENST00000379016 NAA40Q86UY6 237 aa12.74□□□□□ -0.37
HIPK3-202ENST00000379016 FAM58AQ8N1B3 248 aa12.74□□□□□ -0.37
HIPK3-202ENST00000379016 PAQR8Q8TEZ7 354 aa12.74□□□□□ -0.37
HIPK3-202ENST00000379016 HAPLN3Q96S86 360 aa12.74□□□□□ -0.37
HIPK3-202ENST00000379016 MYOTQ9UBF9 498 aa12.74□□□□□ -0.37
HIPK3-202ENST00000379016 BTBD17A6NE02 478 aa12.74□□□□□ -0.37
HIPK3-202ENST00000379016 WTIPA6NIX2 430 aaPredicted RBP12.74□□□□□ -0.37
HIPK3-202ENST00000379016 IDH3AP50213 366 aa12.74□□□□□ -0.37
HIPK3-202ENST00000379016 PDZD9Q8IXQ8 264 aa12.74□□□□□ -0.37
HIPK3-202ENST00000379016 SARDHQ9UL12 918 aa12.74□□□□□ -0.37
HIPK3-202ENST00000379016 NPIPA5A0A0B4J1W7 369 aa12.73□□□□□ -0.37
HIPK3-202ENST00000379016 RPS13P62277 151 aaKnown RBP12.73□□□□□ -0.37
HIPK3-202ENST00000379016 POU6F2P78424 691 aaPredicted RBP12.73□□□□□ -0.37
HIPK3-202ENST00000379016 PIN1Q13526 163 aaPredicted RBP12.73□□□□□ -0.37
HIPK3-202ENST00000379016 PRSS55Q6UWB4 352 aaPredicted RBP12.73□□□□□ -0.37
HIPK3-202ENST00000379016 MAMDC4Q6UXC1 1216 aa12.73□□□□□ -0.37
HIPK3-202ENST00000379016 UHRF2Q96PU4 802 aa12.73□□□□□ -0.37
HIPK3-202ENST00000379016 CCDC32Q9BV29 185 aa12.73□□□□□ -0.37
HIPK3-202ENST00000379016 OSGIN2Q9Y236 505 aa12.73□□□□□ -0.37
HIPK3-202ENST00000379016 CHRNB2P17787 502 aa12.73□□□□□ -0.37
HIPK3-202ENST00000379016 PBX2P40425 430 aa12.73□□□□□ -0.37
HIPK3-202ENST00000379016 GNB1P62873 340 aa12.73□□□□□ -0.37
HIPK3-202ENST00000379016 OPCMLQ14982 345 aa12.73□□□□□ -0.37
HIPK3-202ENST00000379016 AAK1Q2M2I8 961 aa12.73□□□□□ -0.37
HIPK3-202ENST00000379016 C4orf17Q53FE4 359 aa12.73□□□□□ -0.37
HIPK3-202ENST00000379016 WDR45BQ5MNZ6 344 aa12.73□□□□□ -0.37
HIPK3-202ENST00000379016 PLEKHG7Q6ZR37 379 aa12.73□□□□□ -0.37
HIPK3-202ENST00000379016 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.73□□□□□ -0.37
HIPK3-202ENST00000379016 OBP2BQ9NPH6 170 aa12.73□□□□□ -0.37
HIPK3-202ENST00000379016 MAP3K4Q9Y6R4 1608 aa12.73□□□□□ -0.37
HIPK3-202ENST00000379016 GABARAPH6UMI1 98 aa12.73□□□□□ -0.37
HIPK3-202ENST00000379016 MAGEB4O15481 346 aaPredicted RBP12.73□□□□□ -0.37
HIPK3-202ENST00000379016 GABARAPO95166 117 aa12.73□□□□□ -0.37
HIPK3-202ENST00000379016 SNRPD2P62316 118 aaKnown RBP12.73□□□□□ -0.37
HIPK3-202ENST00000379016 MAP4K2Q12851 820 aa12.73□□□□□ -0.37
HIPK3-202ENST00000379016 ZNF765Q7L2R6 523 aa12.73□□□□□ -0.37
HIPK3-202ENST00000379016 LRRN4CLQ8ND94 238 aa12.73□□□□□ -0.37
HIPK3-202ENST00000379016 SPTSSAQ969W0 71 aa12.73□□□□□ -0.37
HIPK3-202ENST00000379016 SCLYQ96I15 445 aa12.73□□□□□ -0.37
HIPK3-202ENST00000379016 EBF3Q9H4W6 596 aa12.73□□□□□ -0.37
HIPK3-202ENST00000379016 PDE7BQ9NP56 450 aa12.73□□□□□ -0.37
HIPK3-202ENST00000379016 CA14Q9ULX7 337 aa12.73□□□□□ -0.37
HIPK3-202ENST00000379016 ARHGEF12Q9NZN5 1544 aa12.73□□□□□ -0.37
HIPK3-202ENST00000379016 MEIS3P1A6NDR6 274 aa12.73□□□□□ -0.37
HIPK3-202ENST00000379016 RPS18P62269 152 aaKnown RBP12.73□□□□□ -0.37
HIPK3-202ENST00000379016 PLCXD2Q0VAA5 305 aa12.73□□□□□ -0.37
HIPK3-202ENST00000379016 SQSTM1Q13501 440 aa12.73□□□□□ -0.37
HIPK3-202ENST00000379016 GTF2H5Q6ZYL4 71 aa12.73□□□□□ -0.37
HIPK3-202ENST00000379016 FAM71F1Q96KD3 344 aaPredicted RBP12.73□□□□□ -0.37
HIPK3-202ENST00000379016 PCDHGA1Q9Y5H4 931 aa12.73□□□□□ -0.37
HIPK3-202ENST00000379016 TOR1AO14656 332 aa12.73□□□□□ -0.37
HIPK3-202ENST00000379016 NXPH3O95157 252 aa12.73□□□□□ -0.37
HIPK3-202ENST00000379016 CNIH1O95406 144 aa12.73□□□□□ -0.37
HIPK3-202ENST00000379016 SNRNP70P08621 437 aaKnown RBP12.73□□□□□ -0.37
HIPK3-202ENST00000379016 BMP4P12644 408 aa12.73□□□□□ -0.37
HIPK3-202ENST00000379016 CELP19835 753 aa12.73□□□□□ -0.37
HIPK3-202ENST00000379016 GPRC6AQ5T6X5 926 aa12.73□□□□□ -0.37
HIPK3-202ENST00000379016 SGPP2Q8IWX5 399 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms