RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 RAB8BQ92930 207 aa10.1□□□□□ -0.79
ABCF1-202ENST00000376545 NXPE3Q969Y0 559 aa10.1□□□□□ -0.79
ABCF1-202ENST00000376545 ZBED6CLQ96FA7 236 aaPredicted RBP10.1□□□□□ -0.79
ABCF1-202ENST00000376545 KCNS3Q9BQ31 491 aa10.1□□□□□ -0.79
ABCF1-202ENST00000376545 CNPPD1Q9BV87 410 aa10.1□□□□□ -0.79
ABCF1-202ENST00000376545 TSSK6Q9BXA6 273 aa10.1□□□□□ -0.79
ABCF1-202ENST00000376545 POLR2J3Q9H1A7 115 aaKnown RBP10.1□□□□□ -0.79
ABCF1-202ENST00000376545 DNAJC27Q9NZQ0 273 aa10.1□□□□□ -0.79
ABCF1-202ENST00000376545 SLC23A2Q9UGH3 650 aa10.1□□□□□ -0.79
ABCF1-202ENST00000376545 TAC3Q9UHF0 121 aa10.1□□□□□ -0.79
ABCF1-202ENST00000376545 HCN2Q9UL51 889 aa10.1□□□□□ -0.79
ABCF1-202ENST00000376545 GRIP1Q9Y3R0 1128 aa10.1□□□□□ -0.79
ABCF1-202ENST00000376545 DNMT3AQ9Y6K1 912 aaPredicted RBP10.1□□□□□ -0.79
ABCF1-202ENST00000376545 A0A0A6YYD5 115 aa10.09□□□□□ -0.79
ABCF1-202ENST00000376545 EDDM13A0A1B0GTR0 161 aa10.09□□□□□ -0.79
ABCF1-202ENST00000376545 OR10H3O60404 316 aa10.09□□□□□ -0.79
ABCF1-202ENST00000376545 SOX14O95416 240 aa10.09□□□□□ -0.79
ABCF1-202ENST00000376545 TIMP1P01033 207 aa10.09□□□□□ -0.79
ABCF1-202ENST00000376545 CKMT1AP12532 417 aa10.09□□□□□ -0.79
ABCF1-202ENST00000376545 CPEP16870 476 aa10.09□□□□□ -0.79
ABCF1-202ENST00000376545 PSMA1P25786 263 aaKnown RBP10.09□□□□□ -0.79
ABCF1-202ENST00000376545 CCT3P49368 545 aaKnown RBP10.09□□□□□ -0.79
ABCF1-202ENST00000376545 CCR8P51685 355 aa10.09□□□□□ -0.79
ABCF1-202ENST00000376545 CNTN1Q12860 1018 aa10.09□□□□□ -0.79
ABCF1-202ENST00000376545 NDUFA9Q16795 377 aa10.09□□□□□ -0.79
ABCF1-202ENST00000376545 LRRC26Q2I0M4 334 aa10.09□□□□□ -0.79
ABCF1-202ENST00000376545 GAB4Q2WGN9 574 aa10.09□□□□□ -0.79
ABCF1-202ENST00000376545 TRIM69Q86WT6 500 aa10.09□□□□□ -0.79
ABCF1-202ENST00000376545 TMCO6Q96DC7 493 aa10.09□□□□□ -0.79
ABCF1-202ENST00000376545 NRTNQ99748 197 aa10.09□□□□□ -0.79
ABCF1-202ENST00000376545 ROGDIQ9GZN7 287 aa10.09□□□□□ -0.79
ABCF1-202ENST00000376545 MIR1-1HGQ9H1L0 117 aa10.09□□□□□ -0.79
ABCF1-202ENST00000376545 PRM3Q9NNZ6 103 aa10.09□□□□□ -0.79
ABCF1-202ENST00000376545 ZSCAN32Q9NX65 697 aa10.09□□□□□ -0.79
ABCF1-202ENST00000376545 RGS13O14921 159 aa10.09□□□□□ -0.79
ABCF1-202ENST00000376545 PRKYO43930 277 aa10.09□□□□□ -0.79
ABCF1-202ENST00000376545 SSX4O60224 188 aa10.09□□□□□ -0.79
ABCF1-202ENST00000376545 HTR3AP46098 478 aa10.09□□□□□ -0.79
ABCF1-202ENST00000376545 DGKEP52429 567 aa10.09□□□□□ -0.79
ABCF1-202ENST00000376545 NTHL1P78549 312 aa10.09□□□□□ -0.79
ABCF1-202ENST00000376545 SYPL1Q16563 259 aa10.09□□□□□ -0.79
ABCF1-202ENST00000376545 GLYR1Q49A26 553 aaPredicted RBP10.09□□□□□ -0.79
ABCF1-202ENST00000376545 TCEAL5Q5H9L2 206 aa10.09□□□□□ -0.79
ABCF1-202ENST00000376545 PODNL1Q6PEZ8 512 aa10.09□□□□□ -0.79
ABCF1-202ENST00000376545 CASP12Q6UXS9 341 aa10.09□□□□□ -0.79
ABCF1-202ENST00000376545 NUDT13Q86X67 352 aa10.09□□□□□ -0.79
ABCF1-202ENST00000376545 PLA2G15Q8NCC3 412 aa10.09□□□□□ -0.79
ABCF1-202ENST00000376545 OR52I1Q8NGK6 324 aa10.09□□□□□ -0.79
ABCF1-202ENST00000376545 CREB3L4Q8TEY5 395 aa10.09□□□□□ -0.79
ABCF1-202ENST00000376545 OR8D1Q8WZ84 308 aa10.09□□□□□ -0.79
ABCF1-202ENST00000376545 SLC25A46Q96AG3 418 aa10.09□□□□□ -0.79
ABCF1-202ENST00000376545 RGMAQ96B86 450 aa10.09□□□□□ -0.79
ABCF1-202ENST00000376545 MSLNLQ96KJ4 702 aa10.09□□□□□ -0.79
ABCF1-202ENST00000376545 AICDAQ9GZX7 198 aa10.09□□□□□ -0.79
ABCF1-202ENST00000376545 ISYNA1Q9NPH2 558 aa10.09□□□□□ -0.79
ABCF1-202ENST00000376545 SEMA3GQ9NS98 782 aa10.09□□□□□ -0.79
ABCF1-202ENST00000376545 ERVK13-1Q9NX77 482 aa10.09□□□□□ -0.79
ABCF1-202ENST00000376545 TEX10Q9NXF1 929 aaPredicted RBP10.09□□□□□ -0.79
ABCF1-202ENST00000376545 P2RX2Q9UBL9 471 aa10.09□□□□□ -0.79
ABCF1-202ENST00000376545 MUTYHQ9UIF7 546 aa10.09□□□□□ -0.79
ABCF1-202ENST00000376545 STK25O00506 426 aa10.09□□□□□ -0.79
ABCF1-202ENST00000376545 IL1AP01583 271 aa10.09□□□□□ -0.79
ABCF1-202ENST00000376545 DRD2P14416 443 aa10.09□□□□□ -0.79
ABCF1-202ENST00000376545 MMP11P24347 488 aa10.09□□□□□ -0.79
ABCF1-202ENST00000376545 RFX2P48378 723 aa10.09□□□□□ -0.79
ABCF1-202ENST00000376545 MAN2A2P49641 1150 aa10.09□□□□□ -0.79
ABCF1-202ENST00000376545 COPZ1P61923 177 aa10.09□□□□□ -0.79
ABCF1-202ENST00000376545 HSPB3Q12988 150 aa10.09□□□□□ -0.79
ABCF1-202ENST00000376545 ELAVL3Q14576 367 aaKnown RBP10.09□□□□□ -0.79
ABCF1-202ENST00000376545 SYT14P1Q58G82 188 aa10.09□□□□□ -0.79
ABCF1-202ENST00000376545 KIAA1161Q6NSJ0 714 aa10.09□□□□□ -0.79
ABCF1-202ENST00000376545 ZER1Q7Z7L7 766 aa10.09□□□□□ -0.79
ABCF1-202ENST00000376545 AMZ2Q86W34 360 aa10.09□□□□□ -0.79
ABCF1-202ENST00000376545 SLC34A3Q8N130 599 aa10.09□□□□□ -0.79
ABCF1-202ENST00000376545 TCEANCQ8N8B7 351 aa10.09□□□□□ -0.79
ABCF1-202ENST00000376545 OR6F1Q8NGZ6 308 aa10.09□□□□□ -0.79
ABCF1-202ENST00000376545 UCN3Q969E3 161 aa10.09□□□□□ -0.79
ABCF1-202ENST00000376545 TP53INP1Q96A56 240 aa10.09□□□□□ -0.79
ABCF1-202ENST00000376545 SRRQ9GZT4 340 aa10.09□□□□□ -0.79
ABCF1-202ENST00000376545 TMEM245Q9H330 911 aa10.09□□□□□ -0.79
ABCF1-202ENST00000376545 FGF20Q9NP95 211 aaPredicted RBP10.09□□□□□ -0.79
ABCF1-202ENST00000376545 SEC14L3Q9UDX4 400 aa10.09□□□□□ -0.79
ABCF1-202ENST00000376545 NINQ8N4C6 2090 aa10.08□□□□□ -0.8
ABCF1-202ENST00000376545 NDUFS4O43181 175 aa10.08□□□□□ -0.8
ABCF1-202ENST00000376545 APOA1P02647 267 aa10.08□□□□□ -0.8
ABCF1-202ENST00000376545 HNRNPA1P09651 372 aaKnown RBP eCLIP10.08□□□□□ -0.8
ABCF1-202ENST00000376545 CEBPBP17676 345 aa10.08□□□□□ -0.8
ABCF1-202ENST00000376545 PCYT1AP49585 367 aa10.08□□□□□ -0.8
ABCF1-202ENST00000376545 FUT5Q11128 374 aa10.08□□□□□ -0.8
ABCF1-202ENST00000376545 TARDBPQ13148 414 aaKnown RBP eCLIP10.08□□□□□ -0.83e-6■□□□□ 10.6
ABCF1-202ENST00000376545 PLPP4Q5VZY2 271 aa10.08□□□□□ -0.8
ABCF1-202ENST00000376545 DEF8Q6ZN54 512 aa10.08□□□□□ -0.8
ABCF1-202ENST00000376545 SPATC1Q76KD6 591 aa10.08□□□□□ -0.8
ABCF1-202ENST00000376545 C2orf73Q8N5S3 287 aaPredicted RBP10.08□□□□□ -0.8
ABCF1-202ENST00000376545 CLDN22Q8N7P3 220 aa10.08□□□□□ -0.8
ABCF1-202ENST00000376545 AMER3Q8N944 861 aa10.08□□□□□ -0.8
ABCF1-202ENST00000376545 VANGL1Q8TAA9 524 aaPredicted RBP10.08□□□□□ -0.8
ABCF1-202ENST00000376545 GPR151Q8TDV0 419 aa10.08□□□□□ -0.8
ABCF1-202ENST00000376545 ZNF486Q96H40 463 aaPredicted RBP10.08□□□□□ -0.8
ABCF1-202ENST00000376545 AMDHD1Q96NU7 426 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms