RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 KCNE1BA0A087WTH5 132 aa12.27□□□□□ -0.45
MSH5-204ENST00000375755 LRRTM2O43300 516 aa12.27□□□□□ -0.45
MSH5-204ENST00000375755 PRKACAP17612 351 aa12.27□□□□□ -0.45
MSH5-204ENST00000375755 CSNK1DP48730 415 aa12.27□□□□□ -0.45
MSH5-204ENST00000375755 SRSF11Q05519 484 aaKnown RBP12.27□□□□□ -0.45
MSH5-204ENST00000375755 GAB1Q13480 694 aa12.27□□□□□ -0.45
MSH5-204ENST00000375755 GPM6BQ13491 265 aa12.27□□□□□ -0.45
MSH5-204ENST00000375755 POU4F3Q15319 338 aa12.27□□□□□ -0.45
MSH5-204ENST00000375755 DHCR24Q15392 516 aa12.27□□□□□ -0.45
MSH5-204ENST00000375755 IFI44LQ53G44 452 aa12.27□□□□□ -0.45
MSH5-204ENST00000375755 ZNF782Q6ZMW2 699 aaPredicted RBP12.27□□□□□ -0.45
MSH5-204ENST00000375755 BCDIN3DQ7Z5W3 292 aaKnown RBP12.27□□□□□ -0.45
MSH5-204ENST00000375755 NANOGP1Q8N7R0 232 aa12.27□□□□□ -0.45
MSH5-204ENST00000375755 GALNT11Q8NCW6 608 aa12.27□□□□□ -0.45
MSH5-204ENST00000375755 KLHL6Q8WZ60 621 aa12.27□□□□□ -0.45
MSH5-204ENST00000375755 NXPE3Q969Y0 559 aa12.27□□□□□ -0.45
MSH5-204ENST00000375755 MAGEB10Q96LZ2 347 aaPredicted RBP12.27□□□□□ -0.45
MSH5-204ENST00000375755 PPP1R3EQ9H7J1 279 aa12.27□□□□□ -0.45
MSH5-204ENST00000375755 ANKRA2Q9H9E1 313 aa12.27□□□□□ -0.45
MSH5-204ENST00000375755 FZD3Q9NPG1 666 aa12.27□□□□□ -0.45
MSH5-204ENST00000375755 ACER3Q9NUN7 267 aa12.27□□□□□ -0.45
MSH5-204ENST00000375755 FAM227AF5H4B4 570 aa12.26□□□□□ -0.45
MSH5-204ENST00000375755 MPZL2O60487 215 aa12.26□□□□□ -0.45
MSH5-204ENST00000375755 SLC43A1O75387 559 aa12.26□□□□□ -0.45
MSH5-204ENST00000375755 GASTP01350 101 aa12.26□□□□□ -0.45
MSH5-204ENST00000375755 PRKAR1AP10644 381 aa12.26□□□□□ -0.45
MSH5-204ENST00000375755 PTX3P26022 381 aaPredicted RBP12.26□□□□□ -0.45
MSH5-204ENST00000375755 GANABQ14697 944 aaKnown RBP12.26□□□□□ -0.45
MSH5-204ENST00000375755 SHHQ15465 462 aa12.26□□□□□ -0.45
MSH5-204ENST00000375755 SF1Q15637 639 aaKnown RBP12.26□□□□□ -0.45
MSH5-204ENST00000375755 ZXDCQ2QGD7 858 aaPredicted RBP12.26□□□□□ -0.45
MSH5-204ENST00000375755 CNIH2Q6PI25 160 aa12.26□□□□□ -0.45
MSH5-204ENST00000375755 PHOSPHO2Q8TCD6 241 aa12.26□□□□□ -0.45
MSH5-204ENST00000375755 SMG7Q92540 1137 aaKnown RBP12.26□□□□□ -0.45
MSH5-204ENST00000375755 AKAP1Q92667 903 aaKnown RBP eCLIP12.26□□□□□ -0.45
MSH5-204ENST00000375755 SLC6A18Q96N87 628 aa12.26□□□□□ -0.45
MSH5-204ENST00000375755 MND1Q9BWT6 205 aa12.26□□□□□ -0.45
MSH5-204ENST00000375755 COMMD3Q9UBI1 195 aa12.26□□□□□ -0.45
MSH5-204ENST00000375755 FAM8A1Q9UBU6 413 aa12.26□□□□□ -0.45
MSH5-204ENST00000375755 EPOPA6NHQ4 379 aa12.26□□□□□ -0.45
MSH5-204ENST00000375755 C5orf67F2Z3F1 127 aa12.26□□□□□ -0.45
MSH5-204ENST00000375755 ORC5O43913 435 aa12.26□□□□□ -0.45
MSH5-204ENST00000375755 IGFBP1P08833 259 aaPredicted RBP12.26□□□□□ -0.45
MSH5-204ENST00000375755 DGKAP23743 735 aa12.26□□□□□ -0.45
MSH5-204ENST00000375755 PRPH2P23942 346 aa12.26□□□□□ -0.45
MSH5-204ENST00000375755 SPAM1P38567 509 aa12.26□□□□□ -0.45
MSH5-204ENST00000375755 MLLT11Q13015 90 aaPredicted RBP12.26□□□□□ -0.45
MSH5-204ENST00000375755 LEXMQ3ZCV2 418 aa12.26□□□□□ -0.45
MSH5-204ENST00000375755 TPRG1Q6ZUI0 275 aa12.26□□□□□ -0.45
MSH5-204ENST00000375755 FAM46DQ8NEK8 389 aa12.26□□□□□ -0.45
MSH5-204ENST00000375755 AP2M1Q96CW1 435 aa12.26□□□□□ -0.45
MSH5-204ENST00000375755 NELL2Q99435 816 aa12.26□□□□□ -0.45
MSH5-204ENST00000375755 KATNB1Q9BVA0 655 aa12.26□□□□□ -0.45
MSH5-204ENST00000375755 IGFLR1Q9H665 355 aa12.26□□□□□ -0.45
MSH5-204ENST00000375755 FAM120CQ9NX05 1096 aaKnown RBP12.26□□□□□ -0.45
MSH5-204ENST00000375755 RHCGQ9UBD6 479 aa12.26□□□□□ -0.45
MSH5-204ENST00000375755 RWDD3Q9Y3V2 267 aa12.26□□□□□ -0.45
MSH5-204ENST00000375755 C1orf226A1L170 272 aa12.26□□□□□ -0.45
MSH5-204ENST00000375755 LIMS1P48059 325 aa12.26□□□□□ -0.45
MSH5-204ENST00000375755 AGFG1P52594 562 aaKnown RBP12.26□□□□□ -0.45
MSH5-204ENST00000375755 FAM122CQ6P4D5 195 aa12.26□□□□□ -0.45
MSH5-204ENST00000375755 HSD11B1LQ7Z5J1 315 aa12.26□□□□□ -0.45
MSH5-204ENST00000375755 C11orf65Q8NCR3 313 aa12.26□□□□□ -0.45
MSH5-204ENST00000375755 DACT3Q96B18 629 aaPredicted RBP12.26□□□□□ -0.45
MSH5-204ENST00000375755 MTERF3Q96E29 417 aa12.26□□□□□ -0.45
MSH5-204ENST00000375755 SAMD11Q96NU1 681 aa12.26□□□□□ -0.45
MSH5-204ENST00000375755 SOSTQ9BQB4 213 aa12.26□□□□□ -0.45
MSH5-204ENST00000375755 SPNS1Q9H2V7 528 aa12.26□□□□□ -0.45
MSH5-204ENST00000375755 LATS2Q9NRM7 1088 aa12.26□□□□□ -0.45
MSH5-204ENST00000375755 A8MVJ9 347 aa12.25□□□□□ -0.45
MSH5-204ENST00000375755 WASH3PC4AMC7 463 aa12.25□□□□□ -0.45
MSH5-204ENST00000375755 PRRT4C9JH25 899 aa12.25□□□□□ -0.45
MSH5-204ENST00000375755 ATP6V1G2-DDX39BF2Z307 99 aa12.25□□□□□ -0.45
MSH5-204ENST00000375755 INMT-MINDY4F8WBC2 141 aa12.25□□□□□ -0.45
MSH5-204ENST00000375755 TLR4O00206 839 aa12.25□□□□□ -0.45
MSH5-204ENST00000375755 PRAMEF4O60810 478 aa12.25□□□□□ -0.45
MSH5-204ENST00000375755 POP4O95707 220 aaKnown RBP12.25□□□□□ -0.45
MSH5-204ENST00000375755 ZNF7P17097 686 aaPredicted RBP12.25□□□□□ -0.45
MSH5-204ENST00000375755 ITGALP20701 1170 aa12.25□□□□□ -0.45
MSH5-204ENST00000375755 TALDO1P37837 337 aa12.25□□□□□ -0.45
MSH5-204ENST00000375755 FAM78AQ5JUQ0 283 aa12.25□□□□□ -0.45
MSH5-204ENST00000375755 COX20Q5RI15 118 aa12.25□□□□□ -0.45
MSH5-204ENST00000375755 PRAMEF9Q5VWM5 478 aa12.25□□□□□ -0.45
MSH5-204ENST00000375755 SERPINA13PQ6UXR4 307 aa12.25□□□□□ -0.45
MSH5-204ENST00000375755 GDPD4Q6W3E5 623 aa12.25□□□□□ -0.45
MSH5-204ENST00000375755 NXPE1Q8N323 547 aa12.25□□□□□ -0.45
MSH5-204ENST00000375755 ZBTB2Q8N680 514 aa12.25□□□□□ -0.45
MSH5-204ENST00000375755 OR8J2Q8NGG1 315 aa12.25□□□□□ -0.45
MSH5-204ENST00000375755 LHFPL5Q8TAF8 219 aa12.25□□□□□ -0.45
MSH5-204ENST00000375755 TOE1Q96GM8 510 aaKnown RBP12.25□□□□□ -0.45
MSH5-204ENST00000375755 SLC32A1Q9H598 525 aa12.25□□□□□ -0.45
MSH5-204ENST00000375755 TRBV5-4A0A0C4DH59 114 aa12.25□□□□□ -0.45
MSH5-204ENST00000375755 GTPBP1O00178 669 aaKnown RBP12.25□□□□□ -0.45
MSH5-204ENST00000375755 DDCP20711 480 aa12.25□□□□□ -0.45
MSH5-204ENST00000375755 DDX6P26196 483 aaKnown RBP eCLIP12.25□□□□□ -0.45
MSH5-204ENST00000375755 ZNF91Q05481 1191 aa12.25□□□□□ -0.45
MSH5-204ENST00000375755 NCF4Q15080 339 aa12.25□□□□□ -0.45
MSH5-204ENST00000375755 FCN2Q15485 313 aa12.25□□□□□ -0.45
MSH5-204ENST00000375755 MEDAGQ5VYS4 303 aa12.25□□□□□ -0.45
MSH5-204ENST00000375755 ZNF730Q6ZMV8 503 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms