RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 TEX10Q9NXF1 929 aaPredicted RBP13.77□□□□□ -0.2
MSH5-201ENST00000375703 P2RX2Q9UBL9 471 aa13.77□□□□□ -0.2
MSH5-201ENST00000375703 TRPC4Q9UBN4 977 aa13.77□□□□□ -0.2
MSH5-201ENST00000375703 HYKKA2RU49 373 aa13.77□□□□□ -0.21
MSH5-201ENST00000375703 PRAMEF27A3QJZ7 478 aa13.77□□□□□ -0.21
MSH5-201ENST00000375703 M0R3H8 397 aa13.77□□□□□ -0.21
MSH5-201ENST00000375703 PRKYO43930 277 aa13.77□□□□□ -0.21
MSH5-201ENST00000375703 PSMB5P28074 263 aa13.77□□□□□ -0.21
MSH5-201ENST00000375703 MXD1Q05195 221 aa13.77□□□□□ -0.21
MSH5-201ENST00000375703 MESP2Q0VG99 397 aa13.77□□□□□ -0.21
MSH5-201ENST00000375703 COX10Q12887 443 aa13.77□□□□□ -0.21
MSH5-201ENST00000375703 MLLT11Q13015 90 aaPredicted RBP13.77□□□□□ -0.21
MSH5-201ENST00000375703 ZMAT1Q5H9K5 638 aa13.77□□□□□ -0.21
MSH5-201ENST00000375703 USP30Q70CQ3 517 aa13.77□□□□□ -0.21
MSH5-201ENST00000375703 NUDT13Q86X67 352 aa13.77□□□□□ -0.21
MSH5-201ENST00000375703 PHC2Q8IXK0 858 aa13.77□□□□□ -0.21
MSH5-201ENST00000375703 IL17RCQ8NAC3 791 aa13.77□□□□□ -0.21
MSH5-201ENST00000375703 PLA2G15Q8NCC3 412 aa13.77□□□□□ -0.21
MSH5-201ENST00000375703 OR5D16Q8NGK9 328 aa13.77□□□□□ -0.21
MSH5-201ENST00000375703 SETD6Q8TBK2 473 aa13.77□□□□□ -0.21
MSH5-201ENST00000375703 NXPE3Q969Y0 559 aa13.77□□□□□ -0.21
MSH5-201ENST00000375703 LRRC3BQ96PB8 259 aa13.77□□□□□ -0.21
MSH5-201ENST00000375703 SERHL2Q9H4I8 314 aa13.77□□□□□ -0.21
MSH5-201ENST00000375703 PRRT4C9JH25 899 aa13.77□□□□□ -0.21
MSH5-201ENST00000375703 OR1F1O43749 312 aa13.77□□□□□ -0.21
MSH5-201ENST00000375703 CCL5P13501 91 aa13.77□□□□□ -0.21
MSH5-201ENST00000375703 GPC1P35052 558 aa13.77□□□□□ -0.21
MSH5-201ENST00000375703 TGM4P49221 684 aa13.77□□□□□ -0.21
MSH5-201ENST00000375703 COPZ1P61923 177 aa13.77□□□□□ -0.21
MSH5-201ENST00000375703 RPA4Q13156 261 aa13.77□□□□□ -0.21
MSH5-201ENST00000375703 GINS1Q14691 196 aa13.77□□□□□ -0.21
MSH5-201ENST00000375703 ARHGAP19Q14CB8 494 aa13.77□□□□□ -0.21
MSH5-201ENST00000375703 ARMC4Q5T2S8 1044 aa13.77□□□□□ -0.21
MSH5-201ENST00000375703 ZNF544Q6NX49 715 aa13.77□□□□□ -0.21
MSH5-201ENST00000375703 LAX1Q8IWV1 398 aa13.77□□□□□ -0.21
MSH5-201ENST00000375703 TBC1D19Q8N5T2 526 aa13.77□□□□□ -0.21
MSH5-201ENST00000375703 MRPL43Q8N983 215 aaKnown RBP13.77□□□□□ -0.21
MSH5-201ENST00000375703 Q8N9G6 341 aaPredicted RBP13.77□□□□□ -0.21
MSH5-201ENST00000375703 WASH6PQ9NQA3 447 aa13.77□□□□□ -0.21
MSH5-201ENST00000375703 ACSS1Q9NUB1 689 aaPredicted RBP13.77□□□□□ -0.21
MSH5-201ENST00000375703 V9GYH0 126 aa13.77□□□□□ -0.21
MSH5-201ENST00000375703 A0A0G2JN53 185 aa13.76□□□□□ -0.21
MSH5-201ENST00000375703 A0A1W2PRQ8 180 aa13.76□□□□□ -0.21
MSH5-201ENST00000375703 CDRT1O95170 752 aa13.76□□□□□ -0.21
MSH5-201ENST00000375703 CLTBP09497 229 aa13.76□□□□□ -0.21
MSH5-201ENST00000375703 LINC00271P0C7V0 271 aa13.76□□□□□ -0.21
MSH5-201ENST00000375703 MMP11P24347 488 aa13.76□□□□□ -0.21
MSH5-201ENST00000375703 GIPRP48546 466 aa13.76□□□□□ -0.21
MSH5-201ENST00000375703 PSPHP78330 225 aa13.76□□□□□ -0.21
MSH5-201ENST00000375703 ALDH6A1Q02252 535 aaKnown RBP13.76□□□□□ -0.21
MSH5-201ENST00000375703 BAK1Q16611 211 aa13.76□□□□□ -0.21
MSH5-201ENST00000375703 GRASPQ7Z6J2 395 aaPredicted RBP13.76□□□□□ -0.21
MSH5-201ENST00000375703 ZER1Q7Z7L7 766 aa13.76□□□□□ -0.21
MSH5-201ENST00000375703 UBQLNLQ8IYU4 475 aa13.76□□□□□ -0.21
MSH5-201ENST00000375703 AMER3Q8N944 861 aa13.76□□□□□ -0.21
MSH5-201ENST00000375703 OR52I1Q8NGK6 324 aa13.76□□□□□ -0.21
MSH5-201ENST00000375703 OR5K2Q8NHB8 316 aa13.76□□□□□ -0.21
MSH5-201ENST00000375703 SLC35G5Q96KT7 338 aa13.76□□□□□ -0.21
MSH5-201ENST00000375703 NEDD4LQ96PU5 975 aa13.76□□□□□ -0.21
MSH5-201ENST00000375703 POLDIP3Q9BY77 421 aaKnown RBP13.76□□□□□ -0.21
MSH5-201ENST00000375703 KCNK12Q9HB15 430 aa13.76□□□□□ -0.21
MSH5-201ENST00000375703 NPAP1Q9NZP6 1156 aa13.76□□□□□ -0.21
MSH5-201ENST00000375703 PCDHGB2Q9Y5G2 931 aa13.76□□□□□ -0.21
MSH5-201ENST00000375703 NINQ8N4C6 2090 aa13.76□□□□□ -0.21
MSH5-201ENST00000375703 NDUFS4O43181 175 aa13.76□□□□□ -0.21
MSH5-201ENST00000375703 EFCAB14O75071 495 aa13.76□□□□□ -0.21
MSH5-201ENST00000375703 SERPIND1P05546 499 aa13.76□□□□□ -0.21
MSH5-201ENST00000375703 ERGP11308 486 aa13.76□□□□□ -0.21
MSH5-201ENST00000375703 PPP2R1BP30154 601 aa13.76□□□□□ -0.21
MSH5-201ENST00000375703 BMPR1AP36894 532 aa13.76□□□□□ -0.21
MSH5-201ENST00000375703 HTR3AP46098 478 aa13.76□□□□□ -0.21
MSH5-201ENST00000375703 MNX1P50219 401 aaPredicted RBP13.76□□□□□ -0.21
MSH5-201ENST00000375703 IFITM2Q01629 132 aa13.76□□□□□ -0.21
MSH5-201ENST00000375703 HNRNPA1L2Q32P51 320 aaKnown RBP13.76□□□□□ -0.21
MSH5-201ENST00000375703 ACSM5Q6NUN0 579 aa13.76□□□□□ -0.21
MSH5-201ENST00000375703 OLIG3Q7RTU3 272 aa13.76□□□□□ -0.21
MSH5-201ENST00000375703 COMTD1Q86VU5 262 aa13.76□□□□□ -0.21
MSH5-201ENST00000375703 OR4K5Q8NGD3 323 aa13.76□□□□□ -0.21
MSH5-201ENST00000375703 LRR1Q96L50 414 aa13.76□□□□□ -0.21
MSH5-201ENST00000375703 DIMT1Q9UNQ2 313 aaKnown RBP13.76□□□□□ -0.21
MSH5-201ENST00000375703 CMAHPQ9Y471 501 aa13.76□□□□□ -0.21
MSH5-201ENST00000375703 IRAK3Q9Y616 596 aa13.76□□□□□ -0.21
MSH5-201ENST00000375703 MTCL1Q9Y4B5 1905 aaKnown RBP13.75□□□□□ -0.21
MSH5-201ENST00000375703 PLD2O14939 933 aa13.75□□□□□ -0.21
MSH5-201ENST00000375703 RAB36O95755 333 aa13.75□□□□□ -0.21
MSH5-201ENST00000375703 RPN2P04844 631 aa13.75□□□□□ -0.21
MSH5-201ENST00000375703 HSD17B2P37059 387 aa13.75□□□□□ -0.21
MSH5-201ENST00000375703 GJA8P48165 433 aa13.75□□□□□ -0.21
MSH5-201ENST00000375703 LARS2Q15031 903 aaKnown RBP13.75□□□□□ -0.21
MSH5-201ENST00000375703 SYT14P1Q58G82 188 aa13.75□□□□□ -0.21
MSH5-201ENST00000375703 ZNF697Q5TEC3 545 aa13.75□□□□□ -0.21
MSH5-201ENST00000375703 UBE3DQ7Z6J8 389 aa13.75□□□□□ -0.21
MSH5-201ENST00000375703 GALNT6Q8NCL4 622 aa13.75□□□□□ -0.21
MSH5-201ENST00000375703 CXorf40AQ8TE69 158 aa13.75□□□□□ -0.21
MSH5-201ENST00000375703 TMEM203Q969S6 136 aa13.75□□□□□ -0.21
MSH5-201ENST00000375703 PCBD2Q9H0N5 130 aa13.75□□□□□ -0.21
MSH5-201ENST00000375703 GLIPR2Q9H4G4 154 aa13.75□□□□□ -0.21
MSH5-201ENST00000375703 RERGLQ9H628 205 aa13.75□□□□□ -0.21
MSH5-201ENST00000375703 TIGARQ9NQ88 270 aa13.75□□□□□ -0.21
MSH5-201ENST00000375703 TM7SF3Q9NS93 570 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms