RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 ATP6V1C2Q8NEY4 427 aa13.39□□□□□ -0.27
CLCNKA-202ENST00000375692 NLGN4YQ8NFZ3 816 aaPredicted RBP13.39□□□□□ -0.27
CLCNKA-202ENST00000375692 OR52I1Q8NGK6 324 aa13.39□□□□□ -0.27
CLCNKA-202ENST00000375692 C1GALT1C1Q96EU7 318 aa13.39□□□□□ -0.27
CLCNKA-202ENST00000375692 PBX4Q9BYU1 374 aa13.39□□□□□ -0.27
CLCNKA-202ENST00000375692 ABCG4Q9H172 646 aa13.39□□□□□ -0.27
CLCNKA-202ENST00000375692 IRF2BPLQ9H1B7 796 aa13.39□□□□□ -0.27
CLCNKA-202ENST00000375692 TOR4AQ9NXH8 423 aa13.39□□□□□ -0.27
CLCNKA-202ENST00000375692 TAAR2Q9P1P5 351 aa13.39□□□□□ -0.27
CLCNKA-202ENST00000375692 GULP1Q9UBP9 304 aa13.39□□□□□ -0.27
CLCNKA-202ENST00000375692 TRAV19A0A0A6YYK7 116 aa13.38□□□□□ -0.27
CLCNKA-202ENST00000375692 A0A0G2JMP0 313 aa13.38□□□□□ -0.27
CLCNKA-202ENST00000375692 ARRDC5A6NEK1 342 aa13.38□□□□□ -0.27
CLCNKA-202ENST00000375692 C5orf58C9J3I9 102 aa13.38□□□□□ -0.27
CLCNKA-202ENST00000375692 C5orf67F2Z3F1 127 aa13.38□□□□□ -0.27
CLCNKA-202ENST00000375692 ALPPP05187 535 aa13.38□□□□□ -0.27
CLCNKA-202ENST00000375692 CCNYL3P0C7X3 344 aa13.38□□□□□ -0.27
CLCNKA-202ENST00000375692 TRAPPC2P0DI81 140 aa13.38□□□□□ -0.27
CLCNKA-202ENST00000375692 TRAPPC2BP0DI82 140 aa13.38□□□□□ -0.27
CLCNKA-202ENST00000375692 MAN2A2P49641 1150 aa13.38□□□□□ -0.27
CLCNKA-202ENST00000375692 GNG2P59768 71 aa13.38□□□□□ -0.27
CLCNKA-202ENST00000375692 RPS25P62851 125 aaKnown RBP13.38□□□□□ -0.27
CLCNKA-202ENST00000375692 PIN1Q13526 163 aaPredicted RBP13.38□□□□□ -0.27
CLCNKA-202ENST00000375692 C1DQ13901 141 aaKnown RBP13.38□□□□□ -0.27
CLCNKA-202ENST00000375692 MPPE1Q53F39 396 aa13.38□□□□□ -0.27
CLCNKA-202ENST00000375692 ASTLQ6HA08 431 aaPredicted RBP13.38□□□□□ -0.27
CLCNKA-202ENST00000375692 PGBD2Q6P3X8 592 aa13.38□□□□□ -0.27
CLCNKA-202ENST00000375692 OLIG3Q7RTU3 272 aa13.38□□□□□ -0.27
CLCNKA-202ENST00000375692 C2orf73Q8N5S3 287 aaPredicted RBP13.38□□□□□ -0.27
CLCNKA-202ENST00000375692 YIPF7Q8N8F6 280 aa13.38□□□□□ -0.27
CLCNKA-202ENST00000375692 OR8J1Q8NGP2 316 aa13.38□□□□□ -0.27
CLCNKA-202ENST00000375692 SLC7A13Q8TCU3 470 aa13.38□□□□□ -0.27
CLCNKA-202ENST00000375692 BTN2A2Q8WVV5 523 aa13.38□□□□□ -0.27
CLCNKA-202ENST00000375692 REPS1Q96D71 796 aa13.38□□□□□ -0.27
CLCNKA-202ENST00000375692 TMEM19Q96HH6 336 aa13.38□□□□□ -0.27
CLCNKA-202ENST00000375692 MSLNLQ96KJ4 702 aa13.38□□□□□ -0.27
CLCNKA-202ENST00000375692 RACGAP1Q9H0H5 632 aa13.38□□□□□ -0.27
CLCNKA-202ENST00000375692 ACOXLQ9NUZ1 547 aa13.38□□□□□ -0.27
CLCNKA-202ENST00000375692 COMMD3Q9UBI1 195 aa13.38□□□□□ -0.27
CLCNKA-202ENST00000375692 PIPSLA2A3N6 862 aa13.38□□□□□ -0.27
CLCNKA-202ENST00000375692 EPOPA6NHQ4 379 aa13.38□□□□□ -0.27
CLCNKA-202ENST00000375692 POLR1CO15160 346 aaPredicted RBP13.38□□□□□ -0.27
CLCNKA-202ENST00000375692 POP4O95707 220 aaKnown RBP13.38□□□□□ -0.27
CLCNKA-202ENST00000375692 GPM6BQ13491 265 aa13.38□□□□□ -0.27
CLCNKA-202ENST00000375692 EFR3AQ14156 821 aa13.38□□□□□ -0.27
CLCNKA-202ENST00000375692 PDZD3Q86UT5 571 aa13.38□□□□□ -0.27
CLCNKA-202ENST00000375692 C12orf76Q8N812 135 aaPredicted RBP13.38□□□□□ -0.27
CLCNKA-202ENST00000375692 ZFP41Q8N8Y5 198 aa13.38□□□□□ -0.27
CLCNKA-202ENST00000375692 ENKURQ8TC29 256 aa13.38□□□□□ -0.27
CLCNKA-202ENST00000375692 GATAD2BQ8WXI9 593 aa13.38□□□□□ -0.27
CLCNKA-202ENST00000375692 CITED4Q96RK1 184 aa13.38□□□□□ -0.27
CLCNKA-202ENST00000375692 NLNQ9BYT8 704 aa13.38□□□□□ -0.27
CLCNKA-202ENST00000375692 LINC00597Q9H2U6 94 aa13.38□□□□□ -0.27
CLCNKA-202ENST00000375692 SLAMF7Q9NQ25 335 aa13.38□□□□□ -0.27
CLCNKA-202ENST00000375692 MIEF1Q9NQG6 463 aa13.38□□□□□ -0.27
CLCNKA-202ENST00000375692 C5AR2Q9P296 337 aa13.38□□□□□ -0.27
CLCNKA-202ENST00000375692 LSM7Q9UK45 103 aaKnown RBP13.38□□□□□ -0.27
CLCNKA-202ENST00000375692 HCN2Q9UL51 889 aa13.38□□□□□ -0.27
CLCNKA-202ENST00000375692 MGAT4BQ9UQ53 548 aa13.38□□□□□ -0.27
CLCNKA-202ENST00000375692 CLCA3PQ9Y6N3 262 aa13.38□□□□□ -0.27
CLCNKA-202ENST00000375692 SPTBN5Q9NRC6 3674 aaKnown RBP13.38□□□□□ -0.27
CLCNKA-202ENST00000375692 CKAP5Q14008 2032 aa13.37□□□□□ -0.27
CLCNKA-202ENST00000375692 A0A0X1KG70 313 aa13.37□□□□□ -0.27
CLCNKA-202ENST00000375692 SMLR1H3BR10 107 aa13.37□□□□□ -0.27
CLCNKA-202ENST00000375692 AKR7A2O43488 359 aa13.37□□□□□ -0.27
CLCNKA-202ENST00000375692 SH3BP5O60239 455 aa13.37□□□□□ -0.27
CLCNKA-202ENST00000375692 IL1AP01583 271 aa13.37□□□□□ -0.27
CLCNKA-202ENST00000375692 TP53P04637 393 aaPredicted RBP13.37□□□□□ -0.27
CLCNKA-202ENST00000375692 H1F0P07305 194 aaKnown RBP13.37□□□□□ -0.27
CLCNKA-202ENST00000375692 HTR2BP41595 481 aa13.37□□□□□ -0.27
CLCNKA-202ENST00000375692 DGKGP49619 791 aa13.37□□□□□ -0.27
CLCNKA-202ENST00000375692 SNRPD2P62316 118 aaKnown RBP13.37□□□□□ -0.27
CLCNKA-202ENST00000375692 QPRTQ15274 297 aa13.37□□□□□ -0.27
CLCNKA-202ENST00000375692 ZDHHC20Q5W0Z9 365 aa13.37□□□□□ -0.27
CLCNKA-202ENST00000375692 ACSM5Q6NUN0 579 aa13.37□□□□□ -0.27
CLCNKA-202ENST00000375692 C11orf74Q86VG3 221 aa13.37□□□□□ -0.27
CLCNKA-202ENST00000375692 OR52P1PQ8NH57 321 aa13.37□□□□□ -0.27
CLCNKA-202ENST00000375692 TM9SF4Q92544 642 aa13.37□□□□□ -0.27
CLCNKA-202ENST00000375692 PDXPQ96GD0 296 aa13.37□□□□□ -0.27
CLCNKA-202ENST00000375692 KATNB1Q9BVA0 655 aa13.37□□□□□ -0.27
CLCNKA-202ENST00000375692 SLC46A2Q9BY10 475 aa13.37□□□□□ -0.27
CLCNKA-202ENST00000375692 MYNNQ9NPC7 610 aa13.37□□□□□ -0.27
CLCNKA-202ENST00000375692 HCFC2Q9Y5Z7 792 aa13.37□□□□□ -0.27
CLCNKA-202ENST00000375692 PLXND1Q9Y4D7 1925 aa13.37□□□□□ -0.27
CLCNKA-202ENST00000375692 SLC5A10A0PJK1 596 aa13.37□□□□□ -0.27
CLCNKA-202ENST00000375692 PSKH1P11801 424 aa13.37□□□□□ -0.27
CLCNKA-202ENST00000375692 NFE2L1Q14494 772 aa13.37□□□□□ -0.27
CLCNKA-202ENST00000375692 TATDN3Q17R31 274 aa13.37□□□□□ -0.27
CLCNKA-202ENST00000375692 CRTC2Q53ET0 693 aaPredicted RBP13.37□□□□□ -0.27
CLCNKA-202ENST00000375692 SYT14P1Q58G82 188 aa13.37□□□□□ -0.27
CLCNKA-202ENST00000375692 DDI2Q5TDH0 399 aa13.37□□□□□ -0.27
CLCNKA-202ENST00000375692 TMEM220Q6QAJ8 160 aa13.37□□□□□ -0.27
CLCNKA-202ENST00000375692 GDPD4Q6W3E5 623 aa13.37□□□□□ -0.27
CLCNKA-202ENST00000375692 SHFQ7M4L6 423 aa13.37□□□□□ -0.27
CLCNKA-202ENST00000375692 COMTD1Q86VU5 262 aa13.37□□□□□ -0.27
CLCNKA-202ENST00000375692 GDPD1Q8N9F7 314 aa13.37□□□□□ -0.27
CLCNKA-202ENST00000375692 GALNT6Q8NCL4 622 aa13.37□□□□□ -0.27
CLCNKA-202ENST00000375692 LRR1Q96L50 414 aa13.37□□□□□ -0.27
CLCNKA-202ENST00000375692 DHRS1Q96LJ7 313 aa13.37□□□□□ -0.27
CLCNKA-202ENST00000375692 RIPOR3Q96MK2 946 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms