RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 A0A1B0GTH9 108 aa11.3□□□□□ -0.6
LSM2-208ENST00000375661 OR2W5A6NFC9 320 aa11.3□□□□□ -0.6
LSM2-208ENST00000375661 FCHO1O14526 889 aa11.3□□□□□ -0.6
LSM2-208ENST00000375661 KLF11O14901 512 aa11.3□□□□□ -0.6
LSM2-208ENST00000375661 TFECO14948 347 aaPredicted RBP11.3□□□□□ -0.6
LSM2-208ENST00000375661 CHST10O43529 356 aa11.3□□□□□ -0.6
LSM2-208ENST00000375661 PRMT3O60678 531 aa11.3□□□□□ -0.6
LSM2-208ENST00000375661 SNNO75324 88 aaPredicted RBP11.3□□□□□ -0.6
LSM2-208ENST00000375661 SEMA3DO95025 777 aa11.3□□□□□ -0.6
LSM2-208ENST00000375661 HOXD4P09016 255 aaPredicted RBP11.3□□□□□ -0.6
LSM2-208ENST00000375661 HSD3B1P14060 373 aa11.3□□□□□ -0.6
LSM2-208ENST00000375661 CD99P14209 185 aa11.3□□□□□ -0.6
LSM2-208ENST00000375661 ATP5A1P25705 553 aaKnown RBP11.3□□□□□ -0.6
LSM2-208ENST00000375661 HSD3B2P26439 372 aa11.3□□□□□ -0.6
LSM2-208ENST00000375661 CERS1P27544 350 aa11.3□□□□□ -0.6
LSM2-208ENST00000375661 MSX1P28360 303 aa11.3□□□□□ -0.6
LSM2-208ENST00000375661 BSGP35613 385 aa11.3□□□□□ -0.6
LSM2-208ENST00000375661 HLCSP50747 726 aa11.3□□□□□ -0.6
LSM2-208ENST00000375661 ARFIP1P53367 373 aa11.3□□□□□ -0.6
LSM2-208ENST00000375661 MTTPP55157 894 aa11.3□□□□□ -0.6
LSM2-208ENST00000375661 MLF1P58340 268 aa11.3□□□□□ -0.6
LSM2-208ENST00000375661 HMGCS1Q01581 520 aa11.3□□□□□ -0.6
LSM2-208ENST00000375661 TFF3Q07654 80 aa11.3□□□□□ -0.6
LSM2-208ENST00000375661 TGM3Q08188 693 aa11.3□□□□□ -0.6
LSM2-208ENST00000375661 TBL3Q12788 808 aaKnown RBP11.3□□□□□ -0.6
LSM2-208ENST00000375661 CSTF3Q12996 717 aaKnown RBP11.3□□□□□ -0.6
LSM2-208ENST00000375661 HSP90B2PQ58FF3 399 aa11.3□□□□□ -0.6
LSM2-208ENST00000375661 ZNF468Q5VIY5 522 aaPredicted RBP11.3□□□□□ -0.6
LSM2-208ENST00000375661 RNF165Q6ZSG1 346 aa11.3□□□□□ -0.6
LSM2-208ENST00000375661 Q6ZSR9 355 aa11.3□□□□□ -0.6
LSM2-208ENST00000375661 TRIM46Q7Z4K8 759 aa11.3□□□□□ -0.6
LSM2-208ENST00000375661 CD163Q86VB7 1156 aa11.3□□□□□ -0.6
LSM2-208ENST00000375661 ZNF227Q86WZ6 799 aa11.3□□□□□ -0.6
LSM2-208ENST00000375661 TRIM42Q8IWZ5 723 aa11.3□□□□□ -0.6
LSM2-208ENST00000375661 CA13Q8N1Q1 262 aa11.3□□□□□ -0.6
LSM2-208ENST00000375661 METTL4Q8N3J2 472 aa11.3□□□□□ -0.6
LSM2-208ENST00000375661 MARVELD2Q8N4S9 558 aa11.3□□□□□ -0.6
LSM2-208ENST00000375661 ZNF781Q8N8C0 355 aa11.3□□□□□ -0.6
LSM2-208ENST00000375661 GBP7Q8N8V2 638 aaPredicted RBP11.3□□□□□ -0.6
LSM2-208ENST00000375661 SRFBP1Q8NEF9 429 aaKnown RBP11.3□□□□□ -0.6
LSM2-208ENST00000375661 RAB3IL1Q8TBN0 382 aa11.3□□□□□ -0.6
LSM2-208ENST00000375661 AGR3Q8TD06 166 aa11.3□□□□□ -0.6
LSM2-208ENST00000375661 ZNF75CPQ92670 426 aaPredicted RBP11.3□□□□□ -0.6
LSM2-208ENST00000375661 RND1Q92730 232 aa11.3□□□□□ -0.6
LSM2-208ENST00000375661 NINJ1Q92982 152 aa11.3□□□□□ -0.6
LSM2-208ENST00000375661 RGMAQ96B86 450 aa11.3□□□□□ -0.6
LSM2-208ENST00000375661 PEX11GQ96HA9 241 aa11.3□□□□□ -0.6
LSM2-208ENST00000375661 FAR2Q96K12 515 aa11.3□□□□□ -0.6
LSM2-208ENST00000375661 KCNC2Q96PR1 638 aa11.3□□□□□ -0.6
LSM2-208ENST00000375661 FOXC2Q99958 501 aa11.3□□□□□ -0.6
LSM2-208ENST00000375661 CXXC4Q9H2H0 198 aa11.3□□□□□ -0.6
LSM2-208ENST00000375661 CLK4Q9HAZ1 481 aaKnown RBP11.3□□□□□ -0.6
LSM2-208ENST00000375661 PRM3Q9NNZ6 103 aa11.3□□□□□ -0.6
LSM2-208ENST00000375661 KCNJ16Q9NPI9 418 aa11.3□□□□□ -0.6
LSM2-208ENST00000375661 NPDC1Q9NQX5 325 aaPredicted RBP11.3□□□□□ -0.6
LSM2-208ENST00000375661 PLSCR2Q9NRY7 297 aa11.3□□□□□ -0.6
LSM2-208ENST00000375661 INTS9Q9NV88 658 aaKnown RBP11.3□□□□□ -0.6
LSM2-208ENST00000375661 HAO1Q9UJM8 370 aa11.3□□□□□ -0.6
LSM2-208ENST00000375661 SLC12A4Q9UP95 1085 aa11.3□□□□□ -0.6
LSM2-208ENST00000375661 RAP2CQ9Y3L5 183 aa11.3□□□□□ -0.6
LSM2-208ENST00000375661 CCL27Q9Y4X3 112 aa11.3□□□□□ -0.6
LSM2-208ENST00000375661 PTGDR2Q9Y5Y4 395 aa11.3□□□□□ -0.6
LSM2-208ENST00000375661 ITPR3Q14573 2671 aa11.29□□□□□ -0.6
LSM2-208ENST00000375661 MTORP42345 2549 aa11.29□□□□□ -0.6
LSM2-208ENST00000375661 ZNHIT1O43257 154 aa11.29□□□□□ -0.6
LSM2-208ENST00000375661 B3GALT2O43825 422 aa11.29□□□□□ -0.6
LSM2-208ENST00000375661 DIAPH2O60879 1101 aa11.29□□□□□ -0.6
LSM2-208ENST00000375661 EEDO75530 441 aaKnown RBP11.29□□□□□ -0.6
LSM2-208ENST00000375661 TOXO94900 526 aa11.29□□□□□ -0.6
LSM2-208ENST00000375661 NADKO95544 446 aaPredicted RBP11.29□□□□□ -0.6
LSM2-208ENST00000375661 FHP07954 510 aa11.29□□□□□ -0.6
LSM2-208ENST00000375661 HIST1H1TP22492 207 aaPredicted RBP11.29□□□□□ -0.6
LSM2-208ENST00000375661 DNAJA1P31689 397 aaKnown RBP11.29□□□□□ -0.6
LSM2-208ENST00000375661 MEOX1P50221 254 aa11.29□□□□□ -0.6
LSM2-208ENST00000375661 RAP1GDS1P52306 607 aa11.29□□□□□ -0.6
LSM2-208ENST00000375661 OCRLQ01968 901 aa11.29□□□□□ -0.6
LSM2-208ENST00000375661 AP5B1Q2VPB7 878 aa11.29□□□□□ -0.6
LSM2-208ENST00000375661 ATG16L1Q676U5 607 aa11.29□□□□□ -0.6
LSM2-208ENST00000375661 OR4C11Q6IEV9 310 aa11.29□□□□□ -0.6
LSM2-208ENST00000375661 ARHGAP11AQ6P4F7 1023 aa11.29□□□□□ -0.6
LSM2-208ENST00000375661 QSOX2Q6ZRP7 698 aa11.29□□□□□ -0.6
LSM2-208ENST00000375661 ACAD11Q709F0 780 aa11.29□□□□□ -0.6
LSM2-208ENST00000375661 TMEM200AQ86VY9 491 aa11.29□□□□□ -0.6
LSM2-208ENST00000375661 ZCCHC7Q8N3Z6 543 aaKnown RBP11.29□□□□□ -0.6
LSM2-208ENST00000375661 ACOT4Q8N9L9 421 aa11.29□□□□□ -0.6
LSM2-208ENST00000375661 CHDHQ8NE62 594 aaPredicted RBP11.29□□□□□ -0.6
LSM2-208ENST00000375661 TWIST2Q8WVJ9 160 aa11.29□□□□□ -0.6
LSM2-208ENST00000375661 TSLPQ969D9 159 aa11.29□□□□□ -0.6
LSM2-208ENST00000375661 TBC1D20Q96BZ9 403 aa11.29□□□□□ -0.6
LSM2-208ENST00000375661 APIPQ96GX9 242 aa11.29□□□□□ -0.6
LSM2-208ENST00000375661 SERINC2Q96SA4 455 aa11.29□□□□□ -0.6
LSM2-208ENST00000375661 CENPKQ9BS16 269 aa11.29□□□□□ -0.6
LSM2-208ENST00000375661 NPLQ9BXD5 320 aaPredicted RBP11.29□□□□□ -0.6
LSM2-208ENST00000375661 MRPL1Q9BYD6 325 aaKnown RBP11.29□□□□□ -0.6
LSM2-208ENST00000375661 ROGDIQ9GZN7 287 aa11.29□□□□□ -0.6
LSM2-208ENST00000375661 DDX31Q9H8H2 851 aaKnown RBP11.29□□□□□ -0.6
LSM2-208ENST00000375661 PNPOQ9NVS9 261 aa11.29□□□□□ -0.6
LSM2-208ENST00000375661 THAP1Q9NVV9 213 aa11.29□□□□□ -0.6
LSM2-208ENST00000375661 KCMF1Q9P0J7 381 aa11.29□□□□□ -0.6
LSM2-208ENST00000375661 VPS29Q9UBQ0 182 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms