RNA–Protein interactions for RNA: ENST00000375405.7

SCN1A-202, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,097 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-202ENST00000375405 TMEM41BQ5BJD5 291 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 EOGTQ5NDL2 527 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 N4BP2L1Q5TBK1 243 aaPredicted RBP4.46□□□□□ -1.7
SCN1A-202ENST00000375405 CRELD2Q6UXH1 353 aaPredicted RBP4.46□□□□□ -1.7
SCN1A-202ENST00000375405 TMEM151AQ8N4L1 468 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 ARL6IP6Q8N6S5 226 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 GLB1L3Q8NCI6 653 aaPredicted RBP4.46□□□□□ -1.7
SCN1A-202ENST00000375405 OR4Q3Q8NH05 313 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 ANGPTL6Q8NI99 470 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 TMEM47Q9BQJ4 181 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 ZSWIM1Q9BR11 485 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 REEP2Q9BRK0 252 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 FUZQ9BT04 418 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 ACTRT3Q9BYD9 372 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 TMEM231Q9H6L2 316 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 CUTCQ9NTM9 273 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 GPATCH8Q9UKJ3 1502 aaKnown RBP4.46□□□□□ -1.7
SCN1A-202ENST00000375405 GXYLT2A0PJZ3 443 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 ZNF716A6NP11 495 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 TLR4O00206 839 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 SULT1C2O00338 296 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 TRMUO75648 421 aaKnown RBP4.46□□□□□ -1.7
SCN1A-202ENST00000375405 CHRM4P08173 479 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 CT45A10P0DMU9 189 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 RAB6AP20340 208 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 CD40P25942 277 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 IL3RAP26951 378 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 BDKRB2P30411 391 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 SLC6A12P48065 614 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 SOX9P48436 509 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 ST3GAL3Q11203 375 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 CAMK2BQ13554 666 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 HNRNPDQ14103 355 aaKnown RBP4.46□□□□□ -1.7
SCN1A-202ENST00000375405 BOLA3Q53S33 107 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 ENPP6Q6UWR7 440 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 GPRIN3Q6ZVF9 776 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 COX15Q7KZN9 410 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 SSX9Q7RTT3 188 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 CLNKQ7Z7G1 428 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 MRPL10Q7Z7H8 261 aaKnown RBP4.46□□□□□ -1.7
SCN1A-202ENST00000375405 OR5H2Q8NGV7 314 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 DYNLRB2Q8TF09 96 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 NPRL2Q8WTW4 380 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 UBTD2Q8WUN7 234 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 FAM131CQ96AQ9 280 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 PPP3R2Q96LZ3 170 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 KCNH6Q9H252 994 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 C8orf33Q9H7E9 229 aaPredicted RBP4.46□□□□□ -1.7
SCN1A-202ENST00000375405 ROPN1Q9HAT0 212 aaPredicted RBP4.46□□□□□ -1.7
SCN1A-202ENST00000375405 GIN1Q9NXP7 522 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 KCND2Q9NZV8 630 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 OSGIN2Q9Y236 505 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 CAPN6Q9Y6Q1 641 aa4.46□□□□□ -1.7
SCN1A-202ENST00000375405 ANKARQ7Z5J8 1434 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 OR6C74A6NCV1 312 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 F5H0A9 414 aaPredicted RBP4.45□□□□□ -1.7
SCN1A-202ENST00000375405 TNFRSF11BO00300 401 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 LRCH4O75427 683 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 TRUB2O95900 331 aaKnown RBP4.45□□□□□ -1.7
SCN1A-202ENST00000375405 SERPINE2P07093 398 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 UGT1A6P19224 532 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 CCL11P51671 97 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 GANABQ14697 944 aaKnown RBP4.45□□□□□ -1.7
SCN1A-202ENST00000375405 HEPACAMQ14CZ8 416 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 TBCEQ15813 527 aaPredicted RBP4.45□□□□□ -1.7
SCN1A-202ENST00000375405 ZNF585AQ6P3V2 769 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 SLC24A5Q71RS6 500 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 TGIF2LYQ8IUE0 185 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 CLEC10AQ8IUN9 316 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 RBM12BQ8IXT5 1001 aaKnown RBP4.45□□□□□ -1.7
SCN1A-202ENST00000375405 C1orf87Q8N0U7 546 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 FITM2Q8N6M3 262 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 SHKBP1Q8TBC3 707 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 HPSE2Q8WWQ2 592 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 FCGR1BQ92637 280 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 AZIN2Q96A70 460 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 ZNF486Q96H40 463 aaPredicted RBP4.45□□□□□ -1.7
SCN1A-202ENST00000375405 TMEM101Q96IK0 257 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 SLC35G5Q96KT7 338 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 SRRQ9GZT4 340 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 NXF3Q9H4D5 531 aaKnown RBP4.45□□□□□ -1.7
SCN1A-202ENST00000375405 TAGLN3Q9UI15 199 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 ADAMTS6Q9UKP5 1117 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 CHD4Q14839 1912 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 SALL3Q9BXA9 1300 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 TRAPPC8Q9Y2L5 1435 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 IGKV3-7A0A075B6H7 116 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 H3BML4 177 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 CNTN5O94779 1100 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 GLCEO94923 617 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 LCATP04180 440 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 FBLP22087 321 aaKnown RBP4.45□□□□□ -1.7
SCN1A-202ENST00000375405 CDH12P55289 794 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 SPOCK1Q08629 439 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 DOC2AQ14183 400 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 TAF1AQ15573 450 aaPredicted RBP4.45□□□□□ -1.7
SCN1A-202ENST00000375405 RRN3P1Q2M238 152 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 SLC35G1Q2M3R5 365 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 CXCL17Q6UXB2 119 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 SLC36A4Q6YBV0 504 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms