RNA–Protein interactions for RNA: ENST00000374379.8

CLIC4-201, Transcript of chloride intracellular channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC4, Length 4,346 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-201ENST00000374379 SPCS2Q15005 226 aa12.86□□□□□ -0.35
CLIC4-201ENST00000374379 KIAA0040Q15053 153 aa12.86□□□□□ -0.35
CLIC4-201ENST00000374379 DUSP7Q16829 419 aa12.86□□□□□ -0.35
CLIC4-201ENST00000374379 ZNF691Q5VV52 312 aa12.86□□□□□ -0.35
CLIC4-201ENST00000374379 C18orf63Q68DL7 685 aa12.86□□□□□ -0.35
CLIC4-201ENST00000374379 FAAH2Q6GMR7 532 aa12.86□□□□□ -0.35
CLIC4-201ENST00000374379 CENPSQ8N2Z9 138 aa12.86□□□□□ -0.35
CLIC4-201ENST00000374379 OR56A1Q8NGH5 318 aa12.86□□□□□ -0.35
CLIC4-201ENST00000374379 ZNF563Q8TA94 476 aa12.86□□□□□ -0.35
CLIC4-201ENST00000374379 SLC38A5Q8WUX1 472 aa12.86□□□□□ -0.35
CLIC4-201ENST00000374379 LRR1Q96L50 414 aa12.86□□□□□ -0.35
CLIC4-201ENST00000374379 NIPSNAP1Q9BPW8 284 aa12.86□□□□□ -0.35
CLIC4-201ENST00000374379 TMEM168Q9H0V1 697 aa12.86□□□□□ -0.35
CLIC4-201ENST00000374379 OCEL1Q9H607 264 aa12.86□□□□□ -0.35
CLIC4-201ENST00000374379 ZNF624Q9P2J8 865 aaPredicted RBP12.86□□□□□ -0.35
CLIC4-201ENST00000374379 FAM186AA6NE01 2351 aa12.86□□□□□ -0.35
CLIC4-201ENST00000374379 PRAMEF4O60810 478 aa12.86□□□□□ -0.35
CLIC4-201ENST00000374379 SHC2P98077 582 aa12.86□□□□□ -0.35
CLIC4-201ENST00000374379 MVKQ03426 396 aa12.86□□□□□ -0.35
CLIC4-201ENST00000374379 RPA4Q13156 261 aa12.86□□□□□ -0.35
CLIC4-201ENST00000374379 APOFQ13790 326 aa12.86□□□□□ -0.35
CLIC4-201ENST00000374379 PTGES3Q15185 160 aaKnown RBP12.86□□□□□ -0.35
CLIC4-201ENST00000374379 MICAQ29983 383 aa12.86□□□□□ -0.35
CLIC4-201ENST00000374379 CTU2Q2VPK5 515 aaKnown RBP12.86□□□□□ -0.35
CLIC4-201ENST00000374379 TPRG1LQ5T0D9 272 aa12.86□□□□□ -0.35
CLIC4-201ENST00000374379 PRAMEF9Q5VWM5 478 aa12.86□□□□□ -0.35
CLIC4-201ENST00000374379 GALNT12Q8IXK2 581 aa12.86□□□□□ -0.35
CLIC4-201ENST00000374379 ATP6V1C2Q8NEY4 427 aa12.86□□□□□ -0.35
CLIC4-201ENST00000374379 NCSTNQ92542 709 aa12.86□□□□□ -0.35
CLIC4-201ENST00000374379 FCGR1BQ92637 280 aa12.86□□□□□ -0.35
CLIC4-201ENST00000374379 PHOX2BQ99453 314 aa12.86□□□□□ -0.35
CLIC4-201ENST00000374379 TMED9Q9BVK6 235 aa12.86□□□□□ -0.35
CLIC4-201ENST00000374379 MKRN2Q9H000 416 aaKnown RBP12.86□□□□□ -0.35
CLIC4-201ENST00000374379 POM121BA6NF01 834 aa12.85□□□□□ -0.35
CLIC4-201ENST00000374379 OTOL1A6NHN0 477 aaPredicted RBP12.85□□□□□ -0.35
CLIC4-201ENST00000374379 CLDN4O14493 209 aa12.85□□□□□ -0.35
CLIC4-201ENST00000374379 SDC3O75056 442 aa12.85□□□□□ -0.35
CLIC4-201ENST00000374379 ZNF888P0CJ79 500 aaPredicted RBP12.85□□□□□ -0.35
CLIC4-201ENST00000374379 SLC19A1P41440 591 aa12.85□□□□□ -0.35
CLIC4-201ENST00000374379 ADARB1P78563 741 aaKnown RBP12.85□□□□□ -0.35
CLIC4-201ENST00000374379 ZNF404Q494X3 552 aa12.85□□□□□ -0.35
CLIC4-201ENST00000374379 ABHD13Q7L211 337 aa12.85□□□□□ -0.35
CLIC4-201ENST00000374379 RBM45Q8IUH3 476 aaKnown RBP12.85□□□□□ -0.35
CLIC4-201ENST00000374379 GPR135Q8IZ08 494 aa12.85□□□□□ -0.35
CLIC4-201ENST00000374379 MRGPRX3Q96LB0 322 aa12.85□□□□□ -0.35
CLIC4-201ENST00000374379 TMPRSS11AQ6ZMR5 421 aa12.85□□□□□ -0.35
CLIC4-201ENST00000374379 NRROSQ86YC3 692 aa12.85□□□□□ -0.35
CLIC4-201ENST00000374379 PHOSPHO2Q8TCD6 241 aa12.85□□□□□ -0.35
CLIC4-201ENST00000374379 LMX1AQ8TE12 382 aa12.85□□□□□ -0.35
CLIC4-201ENST00000374379 SERGEFQ9UGK8 458 aa12.85□□□□□ -0.35
CLIC4-201ENST00000374379 SIP14410 1827 aa12.85□□□□□ -0.35
CLIC4-201ENST00000374379 C1orf226A1L170 272 aa12.85□□□□□ -0.35
CLIC4-201ENST00000374379 SLC30A4O14863 429 aa12.85□□□□□ -0.35
CLIC4-201ENST00000374379 FHP07954 510 aa12.85□□□□□ -0.35
CLIC4-201ENST00000374379 GABRA3P34903 492 aa12.85□□□□□ -0.35
CLIC4-201ENST00000374379 CDH11P55287 796 aa12.85□□□□□ -0.35
CLIC4-201ENST00000374379 ST3GAL3Q11203 375 aa12.85□□□□□ -0.35
CLIC4-201ENST00000374379 ZNF267Q14586 743 aaPredicted RBP12.85□□□□□ -0.35
CLIC4-201ENST00000374379 FAM43BQ6ZT52 329 aaPredicted RBP12.85□□□□□ -0.35
CLIC4-201ENST00000374379 DGLUCYQ7Z3D6 616 aa12.85□□□□□ -0.35
CLIC4-201ENST00000374379 SLC30A8Q8IWU4 369 aa12.85□□□□□ -0.35
CLIC4-201ENST00000374379 DTX3Q8N9I9 347 aa12.85□□□□□ -0.35
CLIC4-201ENST00000374379 WDR20Q8TBZ3 569 aa12.85□□□□□ -0.35
CLIC4-201ENST00000374379 RSPRY1Q96DX4 576 aa12.85□□□□□ -0.35
CLIC4-201ENST00000374379 TREX2Q9BQ50 279 aaPredicted RBP12.85□□□□□ -0.35
CLIC4-201ENST00000374379 SERHL2Q9H4I8 314 aa12.85□□□□□ -0.35
CLIC4-201ENST00000374379 MVB12BQ9H7P6 319 aa12.85□□□□□ -0.35
CLIC4-201ENST00000374379 FGF22Q9HCT0 170 aa12.85□□□□□ -0.35
CLIC4-201ENST00000374379 SERHLQ9NQF3 203 aa12.85□□□□□ -0.35
CLIC4-201ENST00000374379 SPATA6Q9NWH7 488 aaPredicted RBP12.85□□□□□ -0.35
CLIC4-201ENST00000374379 HCN3Q9P1Z3 774 aa12.85□□□□□ -0.35
CLIC4-201ENST00000374379 CKAP5Q14008 2032 aa12.85□□□□□ -0.35
CLIC4-201ENST00000374379 ALPK2Q86TB3 2170 aa12.85□□□□□ -0.35
CLIC4-201ENST00000374379 RHPN2P1A8MT19 583 aa12.84□□□□□ -0.35
CLIC4-201ENST00000374379 BOLA2-SMG1P6H3BVE0 249 aa12.84□□□□□ -0.35
CLIC4-201ENST00000374379 LINC01565O15544 149 aa12.84□□□□□ -0.35
CLIC4-201ENST00000374379 HOXC11O43248 304 aaPredicted RBP12.84□□□□□ -0.35
CLIC4-201ENST00000374379 AP1G1O43747 822 aa12.84□□□□□ -0.35
CLIC4-201ENST00000374379 TSC22D2O75157 780 aa12.84□□□□□ -0.35
CLIC4-201ENST00000374379 IFI30P13284 250 aa12.84□□□□□ -0.35
CLIC4-201ENST00000374379 LRIF1Q5T3J3 769 aa12.84□□□□□ -0.35
CLIC4-201ENST00000374379 USP43Q70EL4 1123 aa12.84□□□□□ -0.35
CLIC4-201ENST00000374379 BCDIN3DQ7Z5W3 292 aaKnown RBP12.84□□□□□ -0.35
CLIC4-201ENST00000374379 SLC22A16Q86VW1 577 aa12.84□□□□□ -0.35
CLIC4-201ENST00000374379 OR6K6Q8NGW6 343 aa12.84□□□□□ -0.35
CLIC4-201ENST00000374379 GAB3Q8WWW8 586 aa12.84□□□□□ -0.35
CLIC4-201ENST00000374379 FAM46AQ96IP4 442 aaKnown RBP12.84□□□□□ -0.35
CLIC4-201ENST00000374379 ZBTB20Q9HC78 741 aaPredicted RBP12.84□□□□□ -0.35
CLIC4-201ENST00000374379 PNO1Q9NRX1 252 aaKnown RBP12.84□□□□□ -0.35
CLIC4-201ENST00000374379 TRBV4-1A0A0J9YWV2 114 aa12.84□□□□□ -0.35
CLIC4-201ENST00000374379 CDRT1O95170 752 aa12.84□□□□□ -0.35
CLIC4-201ENST00000374379 MRPL3P09001 348 aaKnown RBP12.84□□□□□ -0.35
CLIC4-201ENST00000374379 MAOBP27338 520 aa12.84□□□□□ -0.35
CLIC4-201ENST00000374379 ACADLP28330 430 aa12.84□□□□□ -0.35
CLIC4-201ENST00000374379 SMSP52788 366 aa12.84□□□□□ -0.35
CLIC4-201ENST00000374379 SRP54P61011 504 aaKnown RBP12.84□□□□□ -0.35
CLIC4-201ENST00000374379 MRPL28Q13084 256 aaKnown RBP12.84□□□□□ -0.35
CLIC4-201ENST00000374379 FAM214AQ32MH5 1076 aa12.84□□□□□ -0.35
CLIC4-201ENST00000374379 PROX2Q3B8N5 592 aa12.84□□□□□ -0.35
CLIC4-201ENST00000374379 FIGLAQ6QHK4 219 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms