RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 ZNF607Q96SK3 696 aa18.46■□□□□ 0.55
HDAC1-201ENST00000373548 GABARAPL3Q9BY60 117 aa18.46■□□□□ 0.55
HDAC1-201ENST00000373548 PAPOLBQ9NRJ5 636 aaKnown RBP18.46■□□□□ 0.55
HDAC1-201ENST00000373548 TMEM74BQ9NUR3 256 aa18.46■□□□□ 0.55
HDAC1-201ENST00000373548 PTTG2Q9NZH5 202 aa18.46■□□□□ 0.55
HDAC1-201ENST00000373548 RSL24D1Q9UHA3 163 aaKnown RBP18.46■□□□□ 0.55
HDAC1-201ENST00000373548 PHF11Q9UIL8 331 aa18.46■□□□□ 0.55
HDAC1-201ENST00000373548 PSME2Q9UL46 239 aa18.46■□□□□ 0.55
HDAC1-201ENST00000373548 HSPE1-MOB4S4R3N1 261 aa18.46■□□□□ 0.55
HDAC1-201ENST00000373548 DNAH14Q0VDD8 3507 aa18.46■□□□□ 0.54
HDAC1-201ENST00000373548 SCN2AQ99250 2005 aa18.45■□□□□ 0.54
HDAC1-201ENST00000373548 SLC1A7O00341 560 aa18.45■□□□□ 0.54
HDAC1-201ENST00000373548 EMC8O43402 210 aa18.45■□□□□ 0.54
HDAC1-201ENST00000373548 CPN2P22792 545 aa18.45■□□□□ 0.54
HDAC1-201ENST00000373548 BUD31P41223 144 aaPredicted RBP18.45■□□□□ 0.54
HDAC1-201ENST00000373548 KCNJ5P48544 419 aa18.45■□□□□ 0.54
HDAC1-201ENST00000373548 HMGA2P52926 109 aa18.45■□□□□ 0.54
HDAC1-201ENST00000373548 LIM2P55344 173 aa18.45■□□□□ 0.54
HDAC1-201ENST00000373548 GABARAPL2P60520 117 aa18.45■□□□□ 0.54
HDAC1-201ENST00000373548 FUT5Q11128 374 aa18.45■□□□□ 0.54
HDAC1-201ENST00000373548 TOP3AQ13472 1001 aaPredicted RBP18.45■□□□□ 0.54
HDAC1-201ENST00000373548 COL9A2Q14055 689 aaPredicted RBP18.45■□□□□ 0.54
HDAC1-201ENST00000373548 GANABQ14697 944 aaKnown RBP18.45■□□□□ 0.54
HDAC1-201ENST00000373548 B3GNT6Q6ZMB0 384 aa18.45■□□□□ 0.54
HDAC1-201ENST00000373548 OLIG3Q7RTU3 272 aa18.45■□□□□ 0.54
HDAC1-201ENST00000373548 ZNF438Q7Z4V0 828 aa18.45■□□□□ 0.54
HDAC1-201ENST00000373548 MIPOL1Q8TD10 442 aa18.45■□□□□ 0.54
HDAC1-201ENST00000373548 PROX1Q92786 737 aa18.45■□□□□ 0.54
HDAC1-201ENST00000373548 HLA-CQ95604 372 aa18.45■□□□□ 0.54
HDAC1-201ENST00000373548 ELP4Q96EB1 424 aa18.45■□□□□ 0.54
HDAC1-201ENST00000373548 PITX2Q99697 317 aa18.45■□□□□ 0.54
HDAC1-201ENST00000373548 GPC6Q9Y625 555 aaPredicted RBP18.45■□□□□ 0.54
HDAC1-201ENST00000373548 OR5K3A6NET4 321 aa18.44■□□□□ 0.54
HDAC1-201ENST00000373548 B4DGG1 531 aa18.44■□□□□ 0.54
HDAC1-201ENST00000373548 SOX1O00570 391 aaPredicted RBP18.44■□□□□ 0.54
HDAC1-201ENST00000373548 PCDH17O14917 1159 aa18.44■□□□□ 0.54
HDAC1-201ENST00000373548 B3GALT2O43825 422 aa18.44■□□□□ 0.54
HDAC1-201ENST00000373548 ABCB7O75027 752 aa18.44■□□□□ 0.54
HDAC1-201ENST00000373548 EIF2S1P05198 315 aaKnown RBP18.44■□□□□ 0.54
HDAC1-201ENST00000373548 HTR1AP08908 422 aa18.44■□□□□ 0.54
HDAC1-201ENST00000373548 LTB4RQ15722 352 aa18.44■□□□□ 0.54
HDAC1-201ENST00000373548 NEDD8Q15843 81 aa18.44■□□□□ 0.54
HDAC1-201ENST00000373548 PTCRAQ6ISU1 281 aaPredicted RBP18.44■□□□□ 0.54
HDAC1-201ENST00000373548 CCDC71Q8IV32 467 aaPredicted RBP18.44■□□□□ 0.54
HDAC1-201ENST00000373548 GALNT15Q8N3T1 639 aa18.44■□□□□ 0.54
HDAC1-201ENST00000373548 RSC1A1Q92681 617 aa18.44■□□□□ 0.54
HDAC1-201ENST00000373548 RERGQ96A58 199 aaPredicted RBP18.44■□□□□ 0.54
HDAC1-201ENST00000373548 C16orf58Q96GQ5 468 aa18.44■□□□□ 0.54
HDAC1-201ENST00000373548 CSF3RQ99062 836 aa18.44■□□□□ 0.54
HDAC1-201ENST00000373548 ANKRA2Q9H9E1 313 aa18.44■□□□□ 0.54
HDAC1-201ENST00000373548 AASSQ9UDR5 926 aa18.44■□□□□ 0.54
HDAC1-201ENST00000373548 BLOC1S6Q9UL45 172 aa18.44■□□□□ 0.54
HDAC1-201ENST00000373548 DAPP1Q9UN19 280 aa18.44■□□□□ 0.54
HDAC1-201ENST00000373548 MRPS17Q9Y2R5 130 aaKnown RBP18.44■□□□□ 0.54
HDAC1-201ENST00000373548 FAM170BA6NMN3 283 aa18.44■□□□□ 0.54
HDAC1-201ENST00000373548 FFAR1O14842 300 aa18.44■□□□□ 0.54
HDAC1-201ENST00000373548 NDUFS2O75306 463 aa18.44■□□□□ 0.54
HDAC1-201ENST00000373548 GADD45GO95257 159 aa18.44■□□□□ 0.54
HDAC1-201ENST00000373548 CPNE6O95741 557 aa18.44■□□□□ 0.54
HDAC1-201ENST00000373548 ANXA8P13928 327 aa18.44■□□□□ 0.54
HDAC1-201ENST00000373548 CD27P26842 260 aa18.44■□□□□ 0.54
HDAC1-201ENST00000373548 PPP2R1BP30154 601 aa18.44■□□□□ 0.54
HDAC1-201ENST00000373548 SLC5A2P31639 672 aa18.44■□□□□ 0.54
HDAC1-201ENST00000373548 ANXA11P50995 505 aaKnown RBP18.44■□□□□ 0.54
HDAC1-201ENST00000373548 RPP38P78345 283 aaKnown RBP18.44■□□□□ 0.54
HDAC1-201ENST00000373548 PRR5P85299 388 aa18.44■□□□□ 0.54
HDAC1-201ENST00000373548 RAB39AQ14964 217 aa18.44■□□□□ 0.54
HDAC1-201ENST00000373548 ABHD13Q7L211 337 aa18.44■□□□□ 0.54
HDAC1-201ENST00000373548 OOSP2Q86WS3 158 aa18.44■□□□□ 0.54
HDAC1-201ENST00000373548 ZNF566Q969W8 418 aa18.44■□□□□ 0.54
HDAC1-201ENST00000373548 APOL4Q9BPW4 351 aa18.44■□□□□ 0.54
HDAC1-201ENST00000373548 RHCGQ9UBD6 479 aa18.44■□□□□ 0.54
HDAC1-201ENST00000373548 SEC14L3Q9UDX4 400 aa18.44■□□□□ 0.54
HDAC1-201ENST00000373548 KCND3Q9UK17 655 aa18.44■□□□□ 0.54
HDAC1-201ENST00000373548 ZNF860A6NHJ4 632 aa18.43■□□□□ 0.54
HDAC1-201ENST00000373548 METTL12A8MUP2 240 aa18.43■□□□□ 0.54
HDAC1-201ENST00000373548 CHRM4P08173 479 aa18.43■□□□□ 0.54
HDAC1-201ENST00000373548 IL9P15248 144 aa18.43■□□□□ 0.54
HDAC1-201ENST00000373548 TYRP1P17643 537 aa18.43■□□□□ 0.54
HDAC1-201ENST00000373548 ALOX12P18054 663 aa18.43■□□□□ 0.54
HDAC1-201ENST00000373548 OLR1P78380 273 aa18.43■□□□□ 0.54
HDAC1-201ENST00000373548 LAIR1Q6GTX8 287 aa18.43■□□□□ 0.54
HDAC1-201ENST00000373548 PRSS41Q7RTY9 318 aa18.43■□□□□ 0.54
HDAC1-201ENST00000373548 TSPYL5Q86VY4 417 aaPredicted RBP18.43■□□□□ 0.54
HDAC1-201ENST00000373548 RBM12BQ8IXT5 1001 aaKnown RBP18.43■□□□□ 0.54
HDAC1-201ENST00000373548 NUP43Q8NFH3 380 aa18.43■□□□□ 0.54
HDAC1-201ENST00000373548 OR9Q2Q8NGE9 314 aa18.43■□□□□ 0.54
HDAC1-201ENST00000373548 KAT2AQ92830 837 aa18.43■□□□□ 0.54
HDAC1-201ENST00000373548 ZNF354BQ96LW1 612 aa18.43■□□□□ 0.54
HDAC1-201ENST00000373548 BCL2L10Q9HD36 194 aa18.43■□□□□ 0.54
HDAC1-201ENST00000373548 PAK1IP1Q9NWT1 392 aaPredicted RBP18.43■□□□□ 0.54
HDAC1-201ENST00000373548 KCNE3Q9Y6H6 103 aa18.43■□□□□ 0.54
HDAC1-201ENST00000373548 A0A1W2PR77 199 aa18.43■□□□□ 0.54
HDAC1-201ENST00000373548 SEMA7AO75326 666 aa18.43■□□□□ 0.54
HDAC1-201ENST00000373548 SERPINB7O75635 380 aa18.43■□□□□ 0.54
HDAC1-201ENST00000373548 ANGPTL1O95841 491 aa18.43■□□□□ 0.54
HDAC1-201ENST00000373548 CCDC159P0C7I6 412 aa18.43■□□□□ 0.54
HDAC1-201ENST00000373548 JUNBP17275 347 aaPredicted RBP18.43■□□□□ 0.54
HDAC1-201ENST00000373548 CRISP3P54108 245 aa18.43■□□□□ 0.54
HDAC1-201ENST00000373548 SIM1P81133 766 aaPredicted RBP18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms