RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.69□□□□□ -0.06
GTF3C4-201ENST00000372146 ZNF546Q86UE3 836 aa14.69□□□□□ -0.06
GTF3C4-201ENST00000372146 HMCESQ96FZ2 354 aa14.69□□□□□ -0.06
GTF3C4-201ENST00000372146 LDAHQ9H6V9 325 aa14.69□□□□□ -0.06
GTF3C4-201ENST00000372146 H3BMQ9 156 aa14.69□□□□□ -0.06
GTF3C4-201ENST00000372146 ASGR1P07306 291 aa14.69□□□□□ -0.06
GTF3C4-201ENST00000372146 H2BFMP0C1H6 154 aa14.69□□□□□ -0.06
GTF3C4-201ENST00000372146 CA5AP35218 305 aa14.69□□□□□ -0.06
GTF3C4-201ENST00000372146 MRPS34P82930 218 aaKnown RBP14.69□□□□□ -0.06
GTF3C4-201ENST00000372146 RNASE10Q5GAN6 216 aaKnown RBP14.69□□□□□ -0.06
GTF3C4-201ENST00000372146 LINGO4Q6UY18 593 aa14.69□□□□□ -0.06
GTF3C4-201ENST00000372146 RNF128Q8TEB7 428 aa14.69□□□□□ -0.06
GTF3C4-201ENST00000372146 EPOP01588 193 aa14.69□□□□□ -0.06
GTF3C4-201ENST00000372146 PTGER3P43115 390 aa14.69□□□□□ -0.06
GTF3C4-201ENST00000372146 PPT1P50897 306 aa14.69□□□□□ -0.06
GTF3C4-201ENST00000372146 TECPR1Q7Z6L1 1165 aa14.69□□□□□ -0.06
GTF3C4-201ENST00000372146 ZUFSPQ96AP4 578 aa14.69□□□□□ -0.06
GTF3C4-201ENST00000372146 SYT3Q9BQG1 590 aa14.69□□□□□ -0.06
GTF3C4-201ENST00000372146 CMTM1Q8IZ96 169 aa14.68□□□□□ -0.06
GTF3C4-201ENST00000372146 STSP08842 583 aa14.68□□□□□ -0.06
GTF3C4-201ENST00000372146 OXTRP30559 389 aa14.68□□□□□ -0.06
GTF3C4-201ENST00000372146 TRMT10BQ6PF06 316 aaKnown RBP14.68□□□□□ -0.06
GTF3C4-201ENST00000372146 MBOAT1Q6ZNC8 495 aa14.68□□□□□ -0.06
GTF3C4-201ENST00000372146 GPR155Q7Z3F1 870 aa14.68□□□□□ -0.06
GTF3C4-201ENST00000372146 SPPL2BQ8TCT7 592 aa14.68□□□□□ -0.06
GTF3C4-201ENST00000372146 ELP4Q96EB1 424 aa14.68□□□□□ -0.06
GTF3C4-201ENST00000372146 FNIP2Q9P278 1114 aa14.68□□□□□ -0.06
GTF3C4-201ENST00000372146 INSIG1O15503 277 aa14.68□□□□□ -0.06
GTF3C4-201ENST00000372146 HGSNATQ68CP4 663 aa14.68□□□□□ -0.06
GTF3C4-201ENST00000372146 LRRC55Q6ZSA7 311 aa14.68□□□□□ -0.06
GTF3C4-201ENST00000372146 FAM46BQ96A09 425 aa14.68□□□□□ -0.06
GTF3C4-201ENST00000372146 PCDHB11Q9Y5F2 797 aa14.68□□□□□ -0.06
GTF3C4-201ENST00000372146 MITFO75030 526 aaPredicted RBP14.68□□□□□ -0.06
GTF3C4-201ENST00000372146 PRR18Q8N4B5 295 aa14.68□□□□□ -0.06
GTF3C4-201ENST00000372146 SORCS1Q8WY21 1168 aa14.68□□□□□ -0.06
GTF3C4-201ENST00000372146 LMF1Q96S06 567 aa14.68□□□□□ -0.06
GTF3C4-201ENST00000372146 CYP2S1Q96SQ9 504 aa14.68□□□□□ -0.06
GTF3C4-201ENST00000372146 SDHAF3Q9NRP4 125 aa14.68□□□□□ -0.06
GTF3C4-201ENST00000372146 SH3BGRL2Q9UJC5 107 aa14.68□□□□□ -0.06
GTF3C4-201ENST00000372146 DENRO43583 198 aaKnown RBP14.68□□□□□ -0.06
GTF3C4-201ENST00000372146 MT-ND4P03905 459 aa14.68□□□□□ -0.06
GTF3C4-201ENST00000372146 REEP3Q6NUK4 255 aa14.68□□□□□ -0.06
GTF3C4-201ENST00000372146 XYLT1Q86Y38 959 aa14.68□□□□□ -0.06
GTF3C4-201ENST00000372146 POLDIP3Q9BY77 421 aaKnown RBP14.68□□□□□ -0.06
GTF3C4-201ENST00000372146 SLC28A3Q9HAS3 691 aa14.68□□□□□ -0.06
GTF3C4-201ENST00000372146 ANKMY1Q9P2S6 941 aa14.68□□□□□ -0.06
GTF3C4-201ENST00000372146 FCER1GP30273 86 aa14.68□□□□□ -0.06
GTF3C4-201ENST00000372146 CASP3P42574 277 aa14.68□□□□□ -0.06
GTF3C4-201ENST00000372146 FNDC9Q8TBE3 224 aa14.68□□□□□ -0.06
GTF3C4-201ENST00000372146 RNF170Q96K19 258 aa14.68□□□□□ -0.06
GTF3C4-201ENST00000372146 UROC1Q96N76 676 aa14.68□□□□□ -0.06
GTF3C4-201ENST00000372146 DEFB129Q9H1M3 183 aa14.68□□□□□ -0.06
GTF3C4-201ENST00000372146 SLC31A2O15432 143 aa14.68□□□□□ -0.06
GTF3C4-201ENST00000372146 RNASEH2AO75792 299 aaKnown RBP14.68□□□□□ -0.06
GTF3C4-201ENST00000372146 KCNAB2Q13303 367 aa14.68□□□□□ -0.06
GTF3C4-201ENST00000372146 CAPSQ13938 189 aa14.68□□□□□ -0.06
GTF3C4-201ENST00000372146 SLBPQ14493 270 aaKnown RBP eCLIP14.68□□□□□ -0.06
GTF3C4-201ENST00000372146 TRAM2Q15035 370 aa14.68□□□□□ -0.06
GTF3C4-201ENST00000372146 PLEKHH3Q7Z736 793 aa14.68□□□□□ -0.06
GTF3C4-201ENST00000372146 ACER1Q8TDN7 264 aa14.68□□□□□ -0.06
GTF3C4-201ENST00000372146 SDCBP2Q9H190 292 aa14.68□□□□□ -0.06
GTF3C4-201ENST00000372146 RIOX1Q9H6W3 641 aa14.68□□□□□ -0.06
GTF3C4-201ENST00000372146 EIF2B3Q9NR50 452 aaKnown RBP14.68□□□□□ -0.06
GTF3C4-201ENST00000372146 POLHQ9Y253 713 aa14.68□□□□□ -0.06
GTF3C4-201ENST00000372146 COQ9O75208 318 aa14.67□□□□□ -0.06
GTF3C4-201ENST00000372146 HPRP00739 348 aa14.67□□□□□ -0.06
GTF3C4-201ENST00000372146 DHRS4L1P0CG22 281 aa14.67□□□□□ -0.06
GTF3C4-201ENST00000372146 PSRC1Q6PGN9 363 aaPredicted RBP14.67□□□□□ -0.06
GTF3C4-201ENST00000372146 MEX3BQ6ZN04 569 aaKnown RBP14.67□□□□□ -0.06
GTF3C4-201ENST00000372146 GBAP04062 536 aa14.67□□□□□ -0.06
GTF3C4-201ENST00000372146 KCNJ5P48544 419 aa14.67□□□□□ -0.06
GTF3C4-201ENST00000372146 FLYWCH1Q4VC44 716 aa14.67□□□□□ -0.06
GTF3C4-201ENST00000372146 TMEM220Q6QAJ8 160 aa14.67□□□□□ -0.06
GTF3C4-201ENST00000372146 ACO2Q99798 780 aaKnown RBP14.67□□□□□ -0.06
GTF3C4-201ENST00000372146 ALKAL2Q6UX46 152 aa14.67□□□□□ -0.06
GTF3C4-201ENST00000372146 TIPARPQ7Z3E1 657 aaKnown RBP14.67□□□□□ -0.06
GTF3C4-201ENST00000372146 CMIPQ8IY22 773 aa14.67□□□□□ -0.06
GTF3C4-201ENST00000372146 PHOSPHO1Q8TCT1 267 aa14.67□□□□□ -0.06
GTF3C4-201ENST00000372146 RPH3ALQ9UNE2 315 aa14.67□□□□□ -0.06
GTF3C4-201ENST00000372146 ZNF736B4DX44 427 aaPredicted RBP14.67□□□□□ -0.06
GTF3C4-201ENST00000372146 LYPLA2O95372 231 aa14.67□□□□□ -0.06
GTF3C4-201ENST00000372146 HLA-AP01891 365 aaKnown RBP14.67□□□□□ -0.06
GTF3C4-201ENST00000372146 SLC2A1P11166 492 aa14.67□□□□□ -0.06
GTF3C4-201ENST00000372146 RFC2P35250 354 aa14.67□□□□□ -0.06
GTF3C4-201ENST00000372146 NIPSNAP3BQ9BS92 247 aa14.67□□□□□ -0.06
GTF3C4-201ENST00000372146 LHX5Q9H2C1 402 aa14.67□□□□□ -0.06
GTF3C4-201ENST00000372146 HES2Q9Y543 173 aa14.67□□□□□ -0.06
GTF3C4-201ENST00000372146 MEIS3P1A6NDR6 274 aa14.67□□□□□ -0.06
GTF3C4-201ENST00000372146 KCNQ2O43526 872 aa14.67□□□□□ -0.06
GTF3C4-201ENST00000372146 ALPIP09923 528 aa14.67□□□□□ -0.06
GTF3C4-201ENST00000372146 PTGIRP43119 386 aa14.67□□□□□ -0.06
GTF3C4-201ENST00000372146 ZNF33BQ06732 778 aa14.67□□□□□ -0.06
GTF3C4-201ENST00000372146 OR52W1Q6IF63 320 aa14.67□□□□□ -0.06
GTF3C4-201ENST00000372146 GIMAP1Q8WWP7 306 aa14.67□□□□□ -0.06
GTF3C4-201ENST00000372146 TMEM134Q9H6X4 195 aa14.67□□□□□ -0.06
GTF3C4-201ENST00000372146 SOX1O00570 391 aaPredicted RBP14.67□□□□□ -0.06
GTF3C4-201ENST00000372146 MPPED1O15442 326 aa14.67□□□□□ -0.06
GTF3C4-201ENST00000372146 HPGDSO60760 199 aa14.67□□□□□ -0.06
GTF3C4-201ENST00000372146 SEC14L2O76054 403 aa14.67□□□□□ -0.06
GTF3C4-201ENST00000372146 VIPR1P32241 457 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms