RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 HMCESQ96FZ2 354 aa14.65□□□□□ -0.06
COL5A1-201ENST00000371817 PUS1Q9Y606 427 aaKnown RBP eCLIP14.65□□□□□ -0.06
COL5A1-201ENST00000371817 TBC1D3DA0A087WVF3 549 aa14.65□□□□□ -0.06
COL5A1-201ENST00000371817 TBC1D3IA0A087WXS9 549 aa14.65□□□□□ -0.06
COL5A1-201ENST00000371817 TBC1D3EA0A087X179 549 aa14.65□□□□□ -0.06
COL5A1-201ENST00000371817 TBC1D3KA0A087X1G2 549 aa14.65□□□□□ -0.06
COL5A1-201ENST00000371817 TBC1D3FA6NER0 549 aaPredicted RBP14.65□□□□□ -0.06
COL5A1-201ENST00000371817 TBC1D3LB9A6J9 549 aa14.65□□□□□ -0.06
COL5A1-201ENST00000371817 CDC7O00311 574 aa14.65□□□□□ -0.06
COL5A1-201ENST00000371817 GRIN3BO60391 1043 aa14.65□□□□□ -0.06
COL5A1-201ENST00000371817 TBC1D3HP0C7X1 549 aa14.65□□□□□ -0.06
COL5A1-201ENST00000371817 PYCR1P32322 319 aa14.65□□□□□ -0.06
COL5A1-201ENST00000371817 GDF10P55107 478 aa14.65□□□□□ -0.06
COL5A1-201ENST00000371817 BTG3Q14201 252 aaPredicted RBP14.65□□□□□ -0.06
COL5A1-201ENST00000371817 TBC1D3GQ6DHY5 549 aa14.65□□□□□ -0.06
COL5A1-201ENST00000371817 TBC1D3CQ6IPX1 549 aa14.65□□□□□ -0.06
COL5A1-201ENST00000371817 TBC1D3Q8IZP1 549 aaPredicted RBP14.65□□□□□ -0.06
COL5A1-201ENST00000371817 SLC7A13Q8TCU3 470 aa14.65□□□□□ -0.06
COL5A1-201ENST00000371817 HPSE2Q8WWQ2 592 aa14.65□□□□□ -0.06
COL5A1-201ENST00000371817 DNTTIP1Q9H147 329 aa14.65□□□□□ -0.06
COL5A1-201ENST00000371817 RAC2P15153 192 aa14.65□□□□□ -0.06
COL5A1-201ENST00000371817 NDUFA6P56556 154 aa14.65□□□□□ -0.06
COL5A1-201ENST00000371817 PSPHP78330 225 aa14.65□□□□□ -0.06
COL5A1-201ENST00000371817 SMAD3P84022 425 aaKnown RBP14.65□□□□□ -0.06
COL5A1-201ENST00000371817 SPANXN4Q5MJ08 99 aa14.65□□□□□ -0.06
COL5A1-201ENST00000371817 FAM217AQ8IXS0 508 aa14.65□□□□□ -0.06
COL5A1-201ENST00000371817 FIBCD1Q8N539 461 aa14.65□□□□□ -0.06
COL5A1-201ENST00000371817 FOXRED1Q96CU9 486 aaPredicted RBP14.65□□□□□ -0.06
COL5A1-201ENST00000371817 CNN2Q99439 309 aaKnown RBP14.65□□□□□ -0.06
COL5A1-201ENST00000371817 SDHAF3Q9NRP4 125 aa14.65□□□□□ -0.06
COL5A1-201ENST00000371817 SLC17A6Q9P2U8 582 aa14.65□□□□□ -0.06
COL5A1-201ENST00000371817 CLEC4EQ9ULY5 219 aa14.65□□□□□ -0.06
COL5A1-201ENST00000371817 ZNF318Q5VUA4 2279 aa14.64□□□□□ -0.07
COL5A1-201ENST00000371817 RPS5P46782 204 aaKnown RBP14.64□□□□□ -0.07
COL5A1-201ENST00000371817 RPP30P78346 268 aaKnown RBP14.64□□□□□ -0.07
COL5A1-201ENST00000371817 ACY1Q03154 408 aa14.64□□□□□ -0.07
COL5A1-201ENST00000371817 NIPA2Q8N8Q9 360 aa14.64□□□□□ -0.07
COL5A1-201ENST00000371817 LRRC46Q96FV0 321 aa14.64□□□□□ -0.07
COL5A1-201ENST00000371817 OR52A5Q9H2C5 316 aa14.64□□□□□ -0.07
COL5A1-201ENST00000371817 ABI3Q9P2A4 366 aa14.64□□□□□ -0.07
COL5A1-201ENST00000371817 CXorf49A8MYA2 514 aaPredicted RBP14.64□□□□□ -0.07
COL5A1-201ENST00000371817 PQBP1O60828 265 aaKnown RBP14.64□□□□□ -0.07
COL5A1-201ENST00000371817 SSTR4P31391 388 aa14.64□□□□□ -0.07
COL5A1-201ENST00000371817 UGT3A2Q3SY77 523 aa14.64□□□□□ -0.07
COL5A1-201ENST00000371817 OR4C5Q8NGB2 326 aa14.64□□□□□ -0.07
COL5A1-201ENST00000371817 SORCS1Q8WY21 1168 aa14.64□□□□□ -0.07
COL5A1-201ENST00000371817 RAB11FIP5Q9BXF6 653 aa14.64□□□□□ -0.07
COL5A1-201ENST00000371817 DERAQ9Y315 318 aa14.64□□□□□ -0.07
COL5A1-201ENST00000371817 PDGFAP04085 211 aa14.64□□□□□ -0.07
COL5A1-201ENST00000371817 AKAIN1P0CW23 69 aa14.64□□□□□ -0.07
COL5A1-201ENST00000371817 CTNNB1P35222 781 aa14.64□□□□□ -0.07
COL5A1-201ENST00000371817 GALNT10Q86SR1 603 aa14.64□□□□□ -0.07
COL5A1-201ENST00000371817 CMTM1Q8IZ96 169 aa14.64□□□□□ -0.07
COL5A1-201ENST00000371817 FNDC9Q8TBE3 224 aa14.64□□□□□ -0.07
COL5A1-201ENST00000371817 GLYATL1Q969I3 302 aa14.64□□□□□ -0.07
COL5A1-201ENST00000371817 PRMT6Q96LA8 375 aaPredicted RBP14.64□□□□□ -0.07
COL5A1-201ENST00000371817 TTYH3Q9C0H2 523 aa14.64□□□□□ -0.07
COL5A1-201ENST00000371817 DICER1Q9UPY3 1922 aaKnown RBP14.64□□□□□ -0.07
COL5A1-201ENST00000371817 A0A1W2PQH9 124 aa14.64□□□□□ -0.07
COL5A1-201ENST00000371817 KDM8Q8N371 416 aa14.64□□□□□ -0.07
COL5A1-201ENST00000371817 ANKRD53Q8N9V6 530 aa14.64□□□□□ -0.07
COL5A1-201ENST00000371817 SETD7Q8WTS6 366 aaKnown RBP14.64□□□□□ -0.07
COL5A1-201ENST00000371817 FBXO7Q9Y3I1 522 aa14.64□□□□□ -0.07
COL5A1-201ENST00000371817 DLC1Q96QB1 1528 aa14.64□□□□□ -0.07
COL5A1-201ENST00000371817 CPED1A4D0V7 1026 aa14.64□□□□□ -0.07
COL5A1-201ENST00000371817 NDUFS4O43181 175 aa14.64□□□□□ -0.07
COL5A1-201ENST00000371817 DLX3O60479 287 aa14.64□□□□□ -0.07
COL5A1-201ENST00000371817 SELPLGQ14242 412 aa14.64□□□□□ -0.07
COL5A1-201ENST00000371817 PRRT1Q99946 306 aa14.64□□□□□ -0.07
COL5A1-201ENST00000371817 SIRPGQ9P1W8 387 aa14.64□□□□□ -0.07
COL5A1-201ENST00000371817 TPRP12270 2363 aaKnown RBP14.64□□□□□ -0.07
COL5A1-201ENST00000371817 CABIN1Q9Y6J0 2220 aa14.64□□□□□ -0.07
COL5A1-201ENST00000371817 CBSLP0DN79 551 aa14.64□□□□□ -0.07
COL5A1-201ENST00000371817 L1CAMP32004 1257 aa14.64□□□□□ -0.07
COL5A1-201ENST00000371817 CBSP35520 551 aa14.64□□□□□ -0.07
COL5A1-201ENST00000371817 GAS6Q14393 721 aa14.64□□□□□ -0.07
COL5A1-201ENST00000371817 DEFB128Q7Z7B8 93 aa14.64□□□□□ -0.07
COL5A1-201ENST00000371817 GIFP27352 417 aa14.64□□□□□ -0.07
COL5A1-201ENST00000371817 TMPRSS9Q7Z410 1059 aa14.64□□□□□ -0.07
COL5A1-201ENST00000371817 TMEM150AQ86TG1 271 aa14.64□□□□□ -0.07
COL5A1-201ENST00000371817 ZNF695Q8IW36 515 aa14.64□□□□□ -0.07
COL5A1-201ENST00000371817 CMTM7Q96FZ5 175 aa14.64□□□□□ -0.07
COL5A1-201ENST00000371817 CD84Q9UIB8 345 aa14.64□□□□□ -0.07
COL5A1-201ENST00000371817 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.63□□□□□ -0.07
COL5A1-201ENST00000371817 TCRBV5S4A2TA0A5A2 114 aa14.63□□□□□ -0.07
COL5A1-201ENST00000371817 J3KR12 359 aa14.63□□□□□ -0.07
COL5A1-201ENST00000371817 TNFSF12O43508 249 aa14.63□□□□□ -0.07
COL5A1-201ENST00000371817 STK17BO94768 372 aa14.63□□□□□ -0.07
COL5A1-201ENST00000371817 FAM58AQ8N1B3 248 aa14.63□□□□□ -0.07
COL5A1-201ENST00000371817 RPS12P25398 132 aaKnown RBP14.63□□□□□ -0.07
COL5A1-201ENST00000371817 SGCBQ16585 318 aa14.63□□□□□ -0.07
COL5A1-201ENST00000371817 TMEM220Q6QAJ8 160 aa14.63□□□□□ -0.07
COL5A1-201ENST00000371817 IRF2BP1Q8IU81 584 aa14.63□□□□□ -0.07
COL5A1-201ENST00000371817 C1orf52Q8N6N3 182 aaKnown RBP14.63□□□□□ -0.07
COL5A1-201ENST00000371817 AGLP35573 1532 aa14.63□□□□□ -0.07
COL5A1-201ENST00000371817 TGOLN2O43493 480 aa14.63□□□□□ -0.07
COL5A1-201ENST00000371817 GLUD1P00367 558 aa14.63□□□□□ -0.07
COL5A1-201ENST00000371817 RPL23AP62750 156 aaKnown RBP14.63□□□□□ -0.07
COL5A1-201ENST00000371817 ARHGAP1Q07960 439 aa14.63□□□□□ -0.07
COL5A1-201ENST00000371817 DUSP6Q16828 381 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms