RNA–Protein interactions for RNA: ENST00000368289.6

ECHDC1-202, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5 BASIC

Gene ECHDC1, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-202ENST00000368289 CPNE9Q8IYJ1 553 aa6.16□□□□□ -1.42
ECHDC1-202ENST00000368289 MICU2Q8IYU8 434 aa6.16□□□□□ -1.42
ECHDC1-202ENST00000368289 CHPFQ8IZ52 775 aa6.16□□□□□ -1.42
ECHDC1-202ENST00000368289 SLC25A45Q8N413 288 aa6.16□□□□□ -1.42
ECHDC1-202ENST00000368289 CDYL2Q8N8U2 506 aa6.16□□□□□ -1.42
ECHDC1-202ENST00000368289 L3MBTL4Q8NA19 623 aa6.16□□□□□ -1.42
ECHDC1-202ENST00000368289 SIDT2Q8NBJ9 832 aaKnown RBP6.16□□□□□ -1.42
ECHDC1-202ENST00000368289 PIK3C3Q8NEB9 887 aa6.16□□□□□ -1.42
ECHDC1-202ENST00000368289 ZNF548Q8NEK5 533 aaPredicted RBP6.16□□□□□ -1.42
ECHDC1-202ENST00000368289 OR2T11Q8NH01 316 aa6.16□□□□□ -1.42
ECHDC1-202ENST00000368289 HCAR2Q8TDS4 363 aa6.16□□□□□ -1.42
ECHDC1-202ENST00000368289 PIH1D2Q8WWB5 315 aa6.16□□□□□ -1.42
ECHDC1-202ENST00000368289 IPCEF1Q8WWN9 437 aaPredicted RBP6.16□□□□□ -1.42
ECHDC1-202ENST00000368289 ATL1Q8WXF7 558 aa6.16□□□□□ -1.42
ECHDC1-202ENST00000368289 SNX19Q92543 992 aa6.16□□□□□ -1.42
ECHDC1-202ENST00000368289 MRPS31Q92665 395 aaKnown RBP6.16□□□□□ -1.42
ECHDC1-202ENST00000368289 GTF2H4Q92759 462 aa6.16□□□□□ -1.42
ECHDC1-202ENST00000368289 TMBIM1Q969X1 311 aa6.16□□□□□ -1.42
ECHDC1-202ENST00000368289 RHBDF1Q96CC6 855 aa6.16□□□□□ -1.42
ECHDC1-202ENST00000368289 CXorf40BQ96DE9 158 aa6.16□□□□□ -1.42
ECHDC1-202ENST00000368289 NSMCE3Q96MG7 304 aa6.16□□□□□ -1.42
ECHDC1-202ENST00000368289 KCNA7Q96RP8 456 aa6.16□□□□□ -1.42
ECHDC1-202ENST00000368289 SLC39A3Q9BRY0 314 aa6.16□□□□□ -1.42
ECHDC1-202ENST00000368289 THUMPD3Q9BV44 507 aaKnown RBP6.16□□□□□ -1.42
ECHDC1-202ENST00000368289 CIPCQ9C0C6 399 aa6.16□□□□□ -1.42
ECHDC1-202ENST00000368289 ASB8Q9H765 288 aa6.16□□□□□ -1.42
ECHDC1-202ENST00000368289 IL1RL2Q9HB29 575 aa6.16□□□□□ -1.42
ECHDC1-202ENST00000368289 LRTM1Q9HBL6 345 aa6.16□□□□□ -1.42
ECHDC1-202ENST00000368289 NECTIN3Q9NQS3 549 aa6.16□□□□□ -1.42
ECHDC1-202ENST00000368289 FAIMQ9NVQ4 179 aa6.16□□□□□ -1.42
ECHDC1-202ENST00000368289 WWOXQ9NZC7 414 aa6.16□□□□□ -1.42
ECHDC1-202ENST00000368289 NFKBIL1Q9UBC1 381 aaPredicted RBP6.16□□□□□ -1.42
ECHDC1-202ENST00000368289 LHX3Q9UBR4 397 aa6.16□□□□□ -1.42
ECHDC1-202ENST00000368289 ENOPH1Q9UHY7 261 aa6.16□□□□□ -1.42
ECHDC1-202ENST00000368289 BTRCQ9Y297 605 aa6.16□□□□□ -1.42
ECHDC1-202ENST00000368289 TPRKBQ9Y3C4 175 aa6.16□□□□□ -1.42
ECHDC1-202ENST00000368289 NAALAD2Q9Y3Q0 740 aa6.16□□□□□ -1.42
ECHDC1-202ENST00000368289 OR51B4Q9Y5P0 310 aa6.16□□□□□ -1.42
ECHDC1-202ENST00000368289 SNX5Q9Y5X3 404 aa6.16□□□□□ -1.42
ECHDC1-202ENST00000368289 SVEP1Q4LDE5 3571 aa6.16□□□□□ -1.42
ECHDC1-202ENST00000368289 MN1Q10571 1320 aaPredicted RBP6.16□□□□□ -1.42
ECHDC1-202ENST00000368289 ZANQ9Y493 2812 aa6.16□□□□□ -1.42
ECHDC1-202ENST00000368289 TP53BP1Q12888 1972 aaPredicted RBP6.15□□□□□ -1.42
ECHDC1-202ENST00000368289 IGLV3-16A0A075B6K0 115 aa6.15□□□□□ -1.42
ECHDC1-202ENST00000368289 TRBV5-3A0A0A0MS03 114 aa6.15□□□□□ -1.42
ECHDC1-202ENST00000368289 H3BMQ9 156 aa6.15□□□□□ -1.42
ECHDC1-202ENST00000368289 UPK1AO00322 258 aa6.15□□□□□ -1.42
ECHDC1-202ENST00000368289 MANBAO00462 879 aa6.15□□□□□ -1.42
ECHDC1-202ENST00000368289 CXCR6O00574 342 aa6.15□□□□□ -1.42
ECHDC1-202ENST00000368289 CCL22O00626 93 aa6.15□□□□□ -1.42
ECHDC1-202ENST00000368289 GNGT2O14610 69 aa6.15□□□□□ -1.42
ECHDC1-202ENST00000368289 FFAR3O14843 346 aa6.15□□□□□ -1.42
ECHDC1-202ENST00000368289 TNFSF15O95150 251 aa6.15□□□□□ -1.42
ECHDC1-202ENST00000368289 SLC25A14O95258 325 aaPredicted RBP6.15□□□□□ -1.42
ECHDC1-202ENST00000368289 DDAH2O95865 285 aa6.15□□□□□ -1.42
ECHDC1-202ENST00000368289 CD160O95971 181 aa6.15□□□□□ -1.42
ECHDC1-202ENST00000368289 BCL10O95999 233 aa6.15□□□□□ -1.42
ECHDC1-202ENST00000368289 CST1P01037 141 aa6.15□□□□□ -1.42
ECHDC1-202ENST00000368289 ABCB1P08183 1280 aaPredicted RBP6.15□□□□□ -1.42
ECHDC1-202ENST00000368289 ZNF30P17039 623 aa6.15□□□□□ -1.42
ECHDC1-202ENST00000368289 CTPS1P17812 591 aa6.15□□□□□ -1.42
ECHDC1-202ENST00000368289 DDX5P17844 614 aaKnown RBP6.15□□□□□ -1.42
ECHDC1-202ENST00000368289 CYP2A7P20853 494 aa6.15□□□□□ -1.42
ECHDC1-202ENST00000368289 CRHBPP24387 322 aa6.15□□□□□ -1.42
ECHDC1-202ENST00000368289 CD27P26842 260 aa6.15□□□□□ -1.42
ECHDC1-202ENST00000368289 CFPP27918 469 aa6.15□□□□□ -1.42
ECHDC1-202ENST00000368289 PCSK6P29122 969 aa6.15□□□□□ -1.42
ECHDC1-202ENST00000368289 IL12AP29459 219 aa6.15□□□□□ -1.42
ECHDC1-202ENST00000368289 RBMS1P29558 406 aaKnown RBP6.15□□□□□ -1.42
ECHDC1-202ENST00000368289 OXTRP30559 389 aa6.15□□□□□ -1.42
ECHDC1-202ENST00000368289 S100A3P33764 101 aa6.15□□□□□ -1.42
ECHDC1-202ENST00000368289 RPL3P39023 403 aaKnown RBP6.15□□□□□ -1.42
ECHDC1-202ENST00000368289 ASMTP46597 345 aa6.15□□□□□ -1.42
ECHDC1-202ENST00000368289 RGRP47804 291 aa6.15□□□□□ -1.42
ECHDC1-202ENST00000368289 SERPINB10P48595 397 aa6.15□□□□□ -1.42
ECHDC1-202ENST00000368289 AGTR2P50052 363 aa6.15□□□□□ -1.42
ECHDC1-202ENST00000368289 TPD52P55327 224 aaPredicted RBP6.15□□□□□ -1.42
ECHDC1-202ENST00000368289 RPS14P62263 151 aaKnown RBP6.15□□□□□ -1.42
ECHDC1-202ENST00000368289 RPS24P62847 133 aaKnown RBP6.15□□□□□ -1.42
ECHDC1-202ENST00000368289 CDH18Q13634 790 aa6.15□□□□□ -1.42
ECHDC1-202ENST00000368289 ENPP2Q13822 863 aa6.15□□□□□ -1.42
ECHDC1-202ENST00000368289 RAB39AQ14964 217 aa6.15□□□□□ -1.42
ECHDC1-202ENST00000368289 EIF2S3LQ2VIR3 472 aaKnown RBP6.15□□□□□ -1.42
ECHDC1-202ENST00000368289 RFTN2Q52LD8 501 aaPredicted RBP6.15□□□□□ -1.42
ECHDC1-202ENST00000368289 RABL3Q5HYI8 236 aa6.15□□□□□ -1.42
ECHDC1-202ENST00000368289 C6orf141Q5SZD1 244 aa6.15□□□□□ -1.42
ECHDC1-202ENST00000368289 SHQ1Q6PI26 577 aaKnown RBP6.15□□□□□ -1.42
ECHDC1-202ENST00000368289 SLC2A7Q6PXP3 512 aa6.15□□□□□ -1.42
ECHDC1-202ENST00000368289 USP45Q70EL2 814 aa6.15□□□□□ -1.42
ECHDC1-202ENST00000368289 HTR3DQ70Z44 454 aa6.15□□□□□ -1.42
ECHDC1-202ENST00000368289 PIWIL3Q7Z3Z3 882 aaKnown RBP6.15□□□□□ -1.42
ECHDC1-202ENST00000368289 CACUL1Q86Y37 369 aa6.15□□□□□ -1.42
ECHDC1-202ENST00000368289 TMEM25Q86YD3 366 aa6.15□□□□□ -1.42
ECHDC1-202ENST00000368289 ANKRD13BQ86YJ7 626 aa6.15□□□□□ -1.42
ECHDC1-202ENST00000368289 MCEMP1Q8IX19 187 aa6.15□□□□□ -1.42
ECHDC1-202ENST00000368289 CARFQ8N187 725 aa6.15□□□□□ -1.42
ECHDC1-202ENST00000368289 CFAP52Q8N1V2 620 aa6.15□□□□□ -1.42
ECHDC1-202ENST00000368289 NATD1Q8N6N6 113 aa6.15□□□□□ -1.42
ECHDC1-202ENST00000368289 STPG3Q8N7X2 389 aa6.15□□□□□ -1.42
ECHDC1-202ENST00000368289 SMYD1Q8NB12 490 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms