RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 LDB3O75112 727 aa12.29□□□□□ -0.44
PTPRK-207ENST00000368226 NR2C1P13056 603 aa12.29□□□□□ -0.44
PTPRK-207ENST00000368226 FOXA1P55317 472 aa12.29□□□□□ -0.44
PTPRK-207ENST00000368226 TAS2R38P59533 333 aa12.29□□□□□ -0.44
PTPRK-207ENST00000368226 KCNAB2Q13303 367 aa12.29□□□□□ -0.44
PTPRK-207ENST00000368226 ADAM15Q13444 863 aa12.29□□□□□ -0.44
PTPRK-207ENST00000368226 RAB39AQ14964 217 aa12.29□□□□□ -0.44
PTPRK-207ENST00000368226 ATXN7L3Q14CW9 347 aaPredicted RBP12.29□□□□□ -0.44
PTPRK-207ENST00000368226 CDKN3Q16667 212 aa12.29□□□□□ -0.44
PTPRK-207ENST00000368226 BTBD16Q32M84 506 aa12.29□□□□□ -0.44
PTPRK-207ENST00000368226 LARP4Q71RC2 724 aaKnown RBP eCLIP12.29□□□□□ -0.443e-6■■■■□ 21.5
PTPRK-207ENST00000368226 ASB15Q8WXK1 588 aa12.29□□□□□ -0.44
PTPRK-207ENST00000368226 TIGARQ9NQ88 270 aa12.29□□□□□ -0.44
PTPRK-207ENST00000368226 PTTG2Q9NZH5 202 aa12.29□□□□□ -0.44
PTPRK-207ENST00000368226 MYEF2Q9P2K5 600 aaKnown RBP12.29□□□□□ -0.44
PTPRK-207ENST00000368226 PCTPQ9UKL6 214 aa12.29□□□□□ -0.44
PTPRK-207ENST00000368226 ADAMTS5Q9UNA0 930 aa12.29□□□□□ -0.44
PTPRK-207ENST00000368226 C5P01031 1676 aa12.29□□□□□ -0.44
PTPRK-207ENST00000368226 RDH16O75452 317 aa12.29□□□□□ -0.44
PTPRK-207ENST00000368226 P04436 131 aa12.29□□□□□ -0.44
PTPRK-207ENST00000368226 UQCRC1P31930 480 aa12.29□□□□□ -0.44
PTPRK-207ENST00000368226 DSC1Q08554 894 aa12.29□□□□□ -0.44
PTPRK-207ENST00000368226 CST9Q5W186 159 aa12.29□□□□□ -0.44
PTPRK-207ENST00000368226 TMPPEQ6ZT21 453 aa12.29□□□□□ -0.44
PTPRK-207ENST00000368226 PARS2Q7L3T8 475 aaKnown RBP12.29□□□□□ -0.44
PTPRK-207ENST00000368226 RNF175Q8N4F7 328 aa12.29□□□□□ -0.44
PTPRK-207ENST00000368226 OR51B6Q9H340 312 aa12.29□□□□□ -0.44
PTPRK-207ENST00000368226 POLE4Q9NR33 117 aa12.29□□□□□ -0.44
PTPRK-207ENST00000368226 B4GALT7Q9UBV7 327 aa12.29□□□□□ -0.44
PTPRK-207ENST00000368226 CLEC4EQ9ULY5 219 aa12.29□□□□□ -0.44
PTPRK-207ENST00000368226 A0A0A6YYC8 382 aaPredicted RBP12.29□□□□□ -0.44
PTPRK-207ENST00000368226 OR6C70A6NIJ9 312 aa12.29□□□□□ -0.44
PTPRK-207ENST00000368226 I3L1I5 382 aaPredicted RBP12.29□□□□□ -0.44
PTPRK-207ENST00000368226 LATS1O95835 1130 aa12.29□□□□□ -0.44
PTPRK-207ENST00000368226 CSF2P04141 144 aa12.29□□□□□ -0.44
PTPRK-207ENST00000368226 PVRP15151 417 aa12.29□□□□□ -0.44
PTPRK-207ENST00000368226 PSMB5P28074 263 aa12.29□□□□□ -0.44
PTPRK-207ENST00000368226 IRF4Q15306 451 aa12.29□□□□□ -0.44
PTPRK-207ENST00000368226 ZBED5Q49AG3 693 aa12.29□□□□□ -0.44
PTPRK-207ENST00000368226 PM20D1Q6GTS8 502 aa12.29□□□□□ -0.44
PTPRK-207ENST00000368226 ZSWIM9Q86XI8 627 aa12.29□□□□□ -0.44
PTPRK-207ENST00000368226 IQCF1Q8N6M8 205 aa12.29□□□□□ -0.44
PTPRK-207ENST00000368226 PACRGLQ8N7B6 248 aa12.29□□□□□ -0.44
PTPRK-207ENST00000368226 POGLUT1Q8NBL1 392 aa12.29□□□□□ -0.44
PTPRK-207ENST00000368226 OR8J3Q8NGG0 315 aa12.29□□□□□ -0.44
PTPRK-207ENST00000368226 OR52E2Q8NGJ4 325 aa12.29□□□□□ -0.44
PTPRK-207ENST00000368226 ZNF675Q8TD23 568 aa12.29□□□□□ -0.44
PTPRK-207ENST00000368226 TRIM43Q96BQ3 446 aaPredicted RBP12.29□□□□□ -0.44
PTPRK-207ENST00000368226 SECISBP2Q96T21 854 aaKnown RBP12.29□□□□□ -0.44
PTPRK-207ENST00000368226 KLF16Q9BXK1 252 aaPredicted RBP12.29□□□□□ -0.44
PTPRK-207ENST00000368226 SLC5A7Q9GZV3 580 aa12.29□□□□□ -0.44
PTPRK-207ENST00000368226 CWH43Q9H720 699 aa12.29□□□□□ -0.44
PTPRK-207ENST00000368226 CRYBG1Q9Y4K1 1723 aa12.29□□□□□ -0.44
PTPRK-207ENST00000368226 hCG_1807616A0A1W2PRN6 198 aa12.29□□□□□ -0.44
PTPRK-207ENST00000368226 TEX46H3BTG2 121 aa12.29□□□□□ -0.44
PTPRK-207ENST00000368226 ATF6P18850 670 aa12.29□□□□□ -0.44
PTPRK-207ENST00000368226 S1PR1P21453 382 aa12.29□□□□□ -0.44
PTPRK-207ENST00000368226 SIX1Q15475 284 aaPredicted RBP12.29□□□□□ -0.44
PTPRK-207ENST00000368226 SWT1Q5T5J6 900 aaKnown RBP12.29□□□□□ -0.44
PTPRK-207ENST00000368226 EEF1A1P5Q5VTE0 462 aa12.29□□□□□ -0.44
PTPRK-207ENST00000368226 SLC27A4Q6P1M0 643 aa12.29□□□□□ -0.44
PTPRK-207ENST00000368226 LETMD1Q6P1Q0 360 aa12.29□□□□□ -0.44
PTPRK-207ENST00000368226 ISCA2Q86U28 154 aa12.29□□□□□ -0.44
PTPRK-207ENST00000368226 SLC22A16Q86VW1 577 aa12.29□□□□□ -0.44
PTPRK-207ENST00000368226 OR51L1Q8NGJ5 315 aa12.29□□□□□ -0.44
PTPRK-207ENST00000368226 OR4K13Q8NH42 304 aa12.29□□□□□ -0.44
PTPRK-207ENST00000368226 TMEM19Q96HH6 336 aa12.29□□□□□ -0.44
PTPRK-207ENST00000368226 C14orf166Q9Y224 244 aaKnown RBP12.29□□□□□ -0.44
PTPRK-207ENST00000368226 MBLAC1A4D2B0 266 aaPredicted RBP12.29□□□□□ -0.44
PTPRK-207ENST00000368226 RORAP35398 523 aa12.29□□□□□ -0.44
PTPRK-207ENST00000368226 SMAD2Q15796 467 aaKnown RBP12.29□□□□□ -0.44
PTPRK-207ENST00000368226 OR13C3Q8NGS6 347 aa12.29□□□□□ -0.44
PTPRK-207ENST00000368226 SLC6A15Q9H2J7 730 aa12.29□□□□□ -0.44
PTPRK-207ENST00000368226 AASSQ9UDR5 926 aa12.29□□□□□ -0.44
PTPRK-207ENST00000368226 SORBS2O94875 1100 aaKnown RBP12.28□□□□□ -0.44
PTPRK-207ENST00000368226 S100A6P06703 90 aa12.28□□□□□ -0.44
PTPRK-207ENST00000368226 LRRC37A5PQ49AS3 106 aa12.28□□□□□ -0.44
PTPRK-207ENST00000368226 ATG9BQ674R7 924 aa12.28□□□□□ -0.44
PTPRK-207ENST00000368226 NINJ1Q92982 152 aa12.28□□□□□ -0.44
PTPRK-207ENST00000368226 PGAM5Q96HS1 289 aa12.28□□□□□ -0.44
PTPRK-207ENST00000368226 ATG5Q9H1Y0 275 aa12.28□□□□□ -0.44
PTPRK-207ENST00000368226 TMEM165Q9HC07 324 aa12.28□□□□□ -0.44
PTPRK-207ENST00000368226 MRPL15Q9P015 296 aaKnown RBP12.28□□□□□ -0.44
PTPRK-207ENST00000368226 MEN1O00255 615 aa12.28□□□□□ -0.44
PTPRK-207ENST00000368226 EEDO75530 441 aaKnown RBP12.28□□□□□ -0.44
PTPRK-207ENST00000368226 ERV3-1Q14264 604 aa12.28□□□□□ -0.44
PTPRK-207ENST00000368226 GBX1Q14549 363 aa12.28□□□□□ -0.44
PTPRK-207ENST00000368226 VDAC3Q9Y277 283 aa12.28□□□□□ -0.44
PTPRK-207ENST00000368226 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.28□□□□□ -0.44
PTPRK-207ENST00000368226 FRS3O43559 492 aa12.28□□□□□ -0.44
PTPRK-207ENST00000368226 NARSO43776 548 aaKnown RBP12.28□□□□□ -0.44
PTPRK-207ENST00000368226 RAD1O60671 282 aa12.28□□□□□ -0.44
PTPRK-207ENST00000368226 MAS1P04201 325 aa12.28□□□□□ -0.44
PTPRK-207ENST00000368226 HK3P52790 923 aa12.28□□□□□ -0.44
PTPRK-207ENST00000368226 XKR5Q6UX68 686 aa12.28□□□□□ -0.44
PTPRK-207ENST00000368226 TMEFF1Q8IYR6 380 aa12.28□□□□□ -0.44
PTPRK-207ENST00000368226 ZFYVE21Q9BQ24 234 aa12.28□□□□□ -0.44
PTPRK-207ENST00000368226 ENAMQ9NRM1 1142 aa12.28□□□□□ -0.44
PTPRK-207ENST00000368226 CCDC88AQ3V6T2 1871 aa12.28□□□□□ -0.44
PTPRK-207ENST00000368226 NPPAP01160 153 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms