RNA–Protein interactions for RNA: ENST00000366595.7

NID1-202, Transcript of nidogen 1, humanhuman

TSL 1 (best) BASIC

Gene NID1, Length 5,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-202ENST00000366595 FAM110CQ1W6H9 321 aa16.05■□□□□ 0.16
NID1-202ENST00000366595 UGT3A2Q3SY77 523 aa16.05■□□□□ 0.16
NID1-202ENST00000366595 ARL5BQ96KC2 179 aa16.05■□□□□ 0.16
NID1-202ENST00000366595 NTPCRQ9BSD7 190 aaKnown RBP16.05■□□□□ 0.16
NID1-202ENST00000366595 ERVK13-1Q9NX77 482 aa16.05■□□□□ 0.16
NID1-202ENST00000366595 B4DGG1 531 aa16.05■□□□□ 0.16
NID1-202ENST00000366595 LCMT2O60294 686 aaKnown RBP16.05■□□□□ 0.16
NID1-202ENST00000366595 B4GALT2O60909 372 aa16.05■□□□□ 0.16
NID1-202ENST00000366595 SLC22A5O76082 557 aa16.05■□□□□ 0.16
NID1-202ENST00000366595 CLIC3O95833 236 aa16.05■□□□□ 0.16
NID1-202ENST00000366595 CSTAP01040 98 aa16.05■□□□□ 0.16
NID1-202ENST00000366595 FHP07954 510 aa16.05■□□□□ 0.16
NID1-202ENST00000366595 MYF6P23409 242 aa16.05■□□□□ 0.16
NID1-202ENST00000366595 PTPRRQ15256 657 aa16.05■□□□□ 0.16
NID1-202ENST00000366595 NOXA1Q86UR1 476 aa16.05■□□□□ 0.16
NID1-202ENST00000366595 CMTM1Q8IZ96 169 aa16.05■□□□□ 0.16
NID1-202ENST00000366595 OR2T4Q8NH00 348 aa16.05■□□□□ 0.16
NID1-202ENST00000366595 ELMOD3Q96FG2 381 aa16.05■□□□□ 0.16
NID1-202ENST00000366595 SLC41A3Q96GZ6 507 aa16.05■□□□□ 0.16
NID1-202ENST00000366595 QPCTLQ9NXS2 382 aa16.05■□□□□ 0.16
NID1-202ENST00000366595 H3BSH0 61 aa16.05■□□□□ 0.16
NID1-202ENST00000366595 PRSS3P35030 304 aa16.05■□□□□ 0.16
NID1-202ENST00000366595 PTH2RP49190 550 aa16.05■□□□□ 0.16
NID1-202ENST00000366595 SGCAQ16586 387 aa16.05■□□□□ 0.16
NID1-202ENST00000366595 SLC22A25Q6T423 547 aa16.05■□□□□ 0.16
NID1-202ENST00000366595 SLC35F5Q8WV83 523 aa16.05■□□□□ 0.16
NID1-202ENST00000366595 NLE1Q9NVX2 485 aaPredicted RBP16.05■□□□□ 0.16
NID1-202ENST00000366595 GFOD1Q9NXC2 390 aa16.05■□□□□ 0.16
NID1-202ENST00000366595 SLC1A7O00341 560 aa16.04■□□□□ 0.16
NID1-202ENST00000366595 DUSP11O75319 330 aaKnown RBP16.04■□□□□ 0.16
NID1-202ENST00000366595 RETP07949 1114 aa16.04■□□□□ 0.16
NID1-202ENST00000366595 SNHG28P0DPA3 235 aa16.04■□□□□ 0.16
NID1-202ENST00000366595 UGT2B7P16662 529 aa16.04■□□□□ 0.16
NID1-202ENST00000366595 RFC2P35250 354 aa16.04■□□□□ 0.16
NID1-202ENST00000366595 GGT2P36268 569 aa16.04■□□□□ 0.16
NID1-202ENST00000366595 RAB8AP61006 207 aa16.04■□□□□ 0.16
NID1-202ENST00000366595 GALNT2Q10471 571 aa16.04■□□□□ 0.16
NID1-202ENST00000366595 RCAN2Q14206 197 aa16.04■□□□□ 0.16
NID1-202ENST00000366595 RCBTB1Q8NDN9 531 aa16.04■□□□□ 0.16
NID1-202ENST00000366595 ARNTL2Q8WYA1 636 aa16.04■□□□□ 0.16
NID1-202ENST00000366595 SLC17A6Q9P2U8 582 aa16.04■□□□□ 0.16
NID1-202ENST00000366595 CD300AQ9UGN4 299 aa16.04■□□□□ 0.16
NID1-202ENST00000366595 TCRBV7S3A2A0A539 114 aa16.04■□□□□ 0.16
NID1-202ENST00000366595 FUOMA2VDF0 154 aa16.04■□□□□ 0.16
NID1-202ENST00000366595 CD8B2A6NJW9 211 aa16.04■□□□□ 0.16
NID1-202ENST00000366595 STSP08842 583 aa16.04■□□□□ 0.16
NID1-202ENST00000366595 CD8BP10966 210 aa16.04■□□□□ 0.16
NID1-202ENST00000366595 PGCP20142 388 aa16.04■□□□□ 0.16
NID1-202ENST00000366595 CD6P30203 668 aa16.04■□□□□ 0.16
NID1-202ENST00000366595 CFAP77Q6ZQR2 320 aa16.04■□□□□ 0.16
NID1-202ENST00000366595 KCTD20Q7Z5Y7 419 aa16.04■□□□□ 0.16
NID1-202ENST00000366595 RHEBL1Q8TAI7 183 aa16.04■□□□□ 0.16
NID1-202ENST00000366595 ZDHHC1Q8WTX9 485 aa16.04■□□□□ 0.16
NID1-202ENST00000366595 DCUN1D4Q92564 292 aa16.04■□□□□ 0.16
NID1-202ENST00000366595 RELTQ969Z4 430 aa16.04■□□□□ 0.16
NID1-202ENST00000366595 ZDHHC12Q96GR4 267 aa16.04■□□□□ 0.16
NID1-202ENST00000366595 FBXO7Q9Y3I1 522 aa16.04■□□□□ 0.16
NID1-202ENST00000366595 TECPR2O15040 1411 aa16.04■□□□□ 0.16
NID1-202ENST00000366595 MPC1LP0DKB6 136 aa16.04■□□□□ 0.16
NID1-202ENST00000366595 ERVK-25P63136 954 aa16.04■□□□□ 0.16
NID1-202ENST00000366595 SLC18B1Q6NT16 456 aa16.04■□□□□ 0.16
NID1-202ENST00000366595 FBXL22Q6P050 247 aa16.04■□□□□ 0.16
NID1-202ENST00000366595 CLEC20AQ6ZU45 233 aa16.04■□□□□ 0.16
NID1-202ENST00000366595 SGPP2Q8IWX5 399 aa16.04■□□□□ 0.16
NID1-202ENST00000366595 TEX26Q8N6G2 289 aa16.04■□□□□ 0.16
NID1-202ENST00000366595 OR6C4Q8NGE1 309 aa16.04■□□□□ 0.16
NID1-202ENST00000366595 SAMD10Q9BYL1 202 aa16.04■□□□□ 0.16
NID1-202ENST00000366595 GLTPQ9NZD2 209 aa16.04■□□□□ 0.16
NID1-202ENST00000366595 PTTG3PQ9NZH4 202 aa16.04■□□□□ 0.16
NID1-202ENST00000366595 TTC24A2A3L6 582 aaPredicted RBP16.04■□□□□ 0.16
NID1-202ENST00000366595 ALPIP09923 528 aa16.04■□□□□ 0.16
NID1-202ENST00000366595 HNRNPKP61978 463 aaKnown RBP eCLIP16.04■□□□□ 0.16
NID1-202ENST00000366595 GSTM4Q03013 218 aa16.04■□□□□ 0.16
NID1-202ENST00000366595 LAPTM4AQ15012 233 aa16.04■□□□□ 0.16
NID1-202ENST00000366595 PIM3Q86V86 326 aa16.04■□□□□ 0.16
NID1-202ENST00000366595 TSTD1Q8NFU3 115 aa16.04■□□□□ 0.16
NID1-202ENST00000366595 SH3RF2Q8TEC5 729 aa16.04■□□□□ 0.16
NID1-202ENST00000366595 LRR1Q96L50 414 aa16.04■□□□□ 0.16
NID1-202ENST00000366595 NSUN3Q9H649 340 aaKnown RBP16.04■□□□□ 0.16
NID1-202ENST00000366595 JRKO75564 520 aa16.03■□□□□ 0.16
NID1-202ENST00000366595 LCKP06239 509 aa16.03■□□□□ 0.16
NID1-202ENST00000366595 SF3A2Q15428 464 aaKnown RBP16.03■□□□□ 0.16
NID1-202ENST00000366595 SFRP4Q6FHJ7 346 aaPredicted RBP16.03■□□□□ 0.16
NID1-202ENST00000366595 KCNIP4Q6PIL6 250 aa16.03■□□□□ 0.16
NID1-202ENST00000366595 S100A7AQ86SG5 101 aa16.03■□□□□ 0.16
NID1-202ENST00000366595 SLC2A4RGQ9NR83 387 aa16.03■□□□□ 0.16
NID1-202ENST00000366595 ABRACLQ9P1F3 81 aa16.03■□□□□ 0.16
NID1-202ENST00000366595 PLEKHM1Q9Y4G2 1056 aa16.03■□□□□ 0.16
NID1-202ENST00000366595 OR6C74A6NCV1 312 aa16.03■□□□□ 0.16
NID1-202ENST00000366595 ETFAP13804 333 aa16.03■□□□□ 0.16
NID1-202ENST00000366595 NAA10P41227 235 aaPredicted RBP16.03■□□□□ 0.16
NID1-202ENST00000366595 OR1E2P47887 323 aa16.03■□□□□ 0.16
NID1-202ENST00000366595 RSU1Q15404 277 aa16.03■□□□□ 0.16
NID1-202ENST00000366595 SLC10A6Q3KNW5 377 aa16.03■□□□□ 0.16
NID1-202ENST00000366595 BCL2L15Q5TBC7 163 aa16.03■□□□□ 0.16
NID1-202ENST00000366595 ZC3H14Q6PJT7 736 aaKnown RBP16.03■□□□□ 0.16
NID1-202ENST00000366595 ERN2Q76MJ5 926 aaKnown RBP16.03■□□□□ 0.16
NID1-202ENST00000366595 SYT14Q8NB59 555 aa16.03■□□□□ 0.16
NID1-202ENST00000366595 MEAF6Q9HAF1 191 aa16.03■□□□□ 0.16
NID1-202ENST00000366595 TMEM59LQ9UK28 342 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms