RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 RWDD1Q9H446 243 aaPredicted RBP3.12□□□□□ -1.91
RNU6-28P-201ENST00000362378 DCTPP1Q9H773 170 aa3.12□□□□□ -1.91
RNU6-28P-201ENST00000362378 WDR41Q9HAD4 459 aa3.12□□□□□ -1.91
RNU6-28P-201ENST00000362378 ZDHHC18Q9NUE0 388 aa3.12□□□□□ -1.91
RNU6-28P-201ENST00000362378 THYN1Q9P016 225 aa3.12□□□□□ -1.91
RNU6-28P-201ENST00000362378 ATXN10Q9UBB4 475 aa3.12□□□□□ -1.91
RNU6-28P-201ENST00000362378 ASIC3Q9UHC3 531 aa3.12□□□□□ -1.91
RNU6-28P-201ENST00000362378 SH3BGRL2Q9UJC5 107 aa3.12□□□□□ -1.91
RNU6-28P-201ENST00000362378 ZNF490Q9ULM2 529 aaPredicted RBP3.12□□□□□ -1.91
RNU6-28P-201ENST00000362378 MGAT4BQ9UQ53 548 aa3.12□□□□□ -1.91
RNU6-28P-201ENST00000362378 NIP7Q9Y221 180 aaKnown RBP eCLIP3.12□□□□□ -1.91
RNU6-28P-201ENST00000362378 CUX2O14529 1486 aa3.11□□□□□ -1.91
RNU6-28P-201ENST00000362378 IGHV4-30-2A0A087WSY4 118 aa3.11□□□□□ -1.91
RNU6-28P-201ENST00000362378 FAM230AA0A1W2PPH8 454 aa3.11□□□□□ -1.91
RNU6-28P-201ENST00000362378 BCLAF3A2AJT9 711 aaKnown RBP3.11□□□□□ -1.91
RNU6-28P-201ENST00000362378 ARHGEF33A8MVX0 844 aa3.11□□□□□ -1.91
RNU6-28P-201ENST00000362378 TMCO5BA8MYB1 307 aa3.11□□□□□ -1.91
RNU6-28P-201ENST00000362378 NEDD8-MDP1E9PL57 170 aa3.11□□□□□ -1.91
RNU6-28P-201ENST00000362378 SNAP91O60641 907 aa3.11□□□□□ -1.91
RNU6-28P-201ENST00000362378 NOL3O60936 208 aaKnown RBP3.11□□□□□ -1.91
RNU6-28P-201ENST00000362378 FRAT2O75474 233 aaPredicted RBP3.11□□□□□ -1.91
RNU6-28P-201ENST00000362378 STK17BO94768 372 aa3.11□□□□□ -1.91
RNU6-28P-201ENST00000362378 NDUFA7O95182 113 aa3.11□□□□□ -1.91
RNU6-28P-201ENST00000362378 DIRAS3O95661 229 aa3.11□□□□□ -1.91
RNU6-28P-201ENST00000362378 APBB3O95704 486 aa3.11□□□□□ -1.91
RNU6-28P-201ENST00000362378 HPRP00739 348 aa3.11□□□□□ -1.91
RNU6-28P-201ENST00000362378 IFNB1P01574 187 aa3.11□□□□□ -1.91
RNU6-28P-201ENST00000362378 KRT6BP04259 564 aa3.11□□□□□ -1.91
RNU6-28P-201ENST00000362378 PTPN6P29350 595 aa3.11□□□□□ -1.91
RNU6-28P-201ENST00000362378 PPP2R1AP30153 589 aa3.11□□□□□ -1.91
RNU6-28P-201ENST00000362378 ID1P41134 155 aa3.11□□□□□ -1.91
RNU6-28P-201ENST00000362378 KRT6CP48668 564 aa3.11□□□□□ -1.91
RNU6-28P-201ENST00000362378 SGSHP51688 502 aa3.11□□□□□ -1.91
RNU6-28P-201ENST00000362378 RPS27AP62979 156 aaKnown RBP3.11□□□□□ -1.91
RNU6-28P-201ENST00000362378 PMP22Q01453 160 aa3.11□□□□□ -1.91
RNU6-28P-201ENST00000362378 NAAAQ02083 359 aa3.11□□□□□ -1.91
RNU6-28P-201ENST00000362378 KLHL30Q0D2K2 578 aa3.11□□□□□ -1.91
RNU6-28P-201ENST00000362378 NFATC2Q13469 925 aa3.11□□□□□ -1.91
RNU6-28P-201ENST00000362378 BTG3Q14201 252 aaPredicted RBP3.11□□□□□ -1.91
RNU6-28P-201ENST00000362378 LY6DQ14210 128 aa3.11□□□□□ -1.91
RNU6-28P-201ENST00000362378 FASTKQ14296 549 aaKnown RBP3.11□□□□□ -1.91
RNU6-28P-201ENST00000362378 ZNF146Q15072 292 aa3.11□□□□□ -1.91
RNU6-28P-201ENST00000362378 NECTIN1Q15223 517 aa3.11□□□□□ -1.91
RNU6-28P-201ENST00000362378 TAF7Q15545 349 aaPredicted RBP3.11□□□□□ -1.91
RNU6-28P-201ENST00000362378 HKDC1Q2TB90 917 aa3.11□□□□□ -1.91
RNU6-28P-201ENST00000362378 LDLRAP1Q5SW96 308 aa3.11□□□□□ -1.91
RNU6-28P-201ENST00000362378 FAM43BQ6ZT52 329 aaPredicted RBP3.11□□□□□ -1.91
RNU6-28P-201ENST00000362378 PAQR9Q6ZVX9 377 aa3.11□□□□□ -1.91
RNU6-28P-201ENST00000362378 MCM10Q7L590 875 aa3.11□□□□□ -1.91
RNU6-28P-201ENST00000362378 ZNF329Q86UD4 541 aa3.11□□□□□ -1.91
RNU6-28P-201ENST00000362378 LRRTM1Q86UE6 522 aa3.11□□□□□ -1.91
RNU6-28P-201ENST00000362378 VPS36Q86VN1 386 aa3.11□□□□□ -1.91
RNU6-28P-201ENST00000362378 RANBP3LQ86VV4 465 aaPredicted RBP3.11□□□□□ -1.91
RNU6-28P-201ENST00000362378 KCNMB4Q86W47 210 aa3.11□□□□□ -1.91
RNU6-28P-201ENST00000362378 ICA1LQ8NDH6 482 aa3.11□□□□□ -1.91
RNU6-28P-201ENST00000362378 ZNF248Q8NDW4 579 aa3.11□□□□□ -1.91
RNU6-28P-201ENST00000362378 OR1K1Q8NGR3 316 aa3.11□□□□□ -1.91
RNU6-28P-201ENST00000362378 OR4F5Q8NH21 305 aa3.11□□□□□ -1.91
RNU6-28P-201ENST00000362378 FBXO25Q8TCJ0 367 aa3.11□□□□□ -1.91
RNU6-28P-201ENST00000362378 SYAP1Q96A49 352 aaPredicted RBP3.11□□□□□ -1.91
RNU6-28P-201ENST00000362378 TNFRSF13CQ96RJ3 184 aa3.11□□□□□ -1.91
RNU6-28P-201ENST00000362378 OPRPNQ99935 248 aaPredicted RBP3.11□□□□□ -1.91
RNU6-28P-201ENST00000362378 FICDQ9BVA6 458 aa3.11□□□□□ -1.91
RNU6-28P-201ENST00000362378 KRTAP1-5Q9BYS1 174 aa3.11□□□□□ -1.91
RNU6-28P-201ENST00000362378 NLNQ9BYT8 704 aa3.11□□□□□ -1.91
RNU6-28P-201ENST00000362378 VAT1LQ9HCJ6 419 aa3.11□□□□□ -1.91
RNU6-28P-201ENST00000362378 SCRT2Q9NQ03 307 aa3.11□□□□□ -1.91
RNU6-28P-201ENST00000362378 SLC35D1Q9NTN3 355 aa3.11□□□□□ -1.91
RNU6-28P-201ENST00000362378 THEGQ9P2T0 379 aa3.11□□□□□ -1.91
RNU6-28P-201ENST00000362378 THAP10Q9P2Z0 257 aaPredicted RBP3.11□□□□□ -1.91
RNU6-28P-201ENST00000362378 AP1M2Q9Y6Q5 423 aa3.11□□□□□ -1.91
RNU6-28P-201ENST00000362378 ABCC4O15439 1325 aa3.11□□□□□ -1.91
RNU6-28P-201ENST00000362378 SYNJ2O15056 1496 aa3.1□□□□□ -1.91
RNU6-28P-201ENST00000362378 A0A087WZY1 265 aa3.1□□□□□ -1.91
RNU6-28P-201ENST00000362378 A0A0A6YYD4 124 aa3.1□□□□□ -1.91
RNU6-28P-201ENST00000362378 K7EQG2 157 aa3.1□□□□□ -1.91
RNU6-28P-201ENST00000362378 LGALS8O00214 317 aa3.1□□□□□ -1.91
RNU6-28P-201ENST00000362378 PDXKO00764 312 aa3.1□□□□□ -1.91
RNU6-28P-201ENST00000362378 CHADO15335 359 aa3.1□□□□□ -1.91
RNU6-28P-201ENST00000362378 ARHGEF9O43307 516 aa3.1□□□□□ -1.91
RNU6-28P-201ENST00000362378 PEX11AO75192 247 aa3.1□□□□□ -1.91
RNU6-28P-201ENST00000362378 SCGB2A1O75556 95 aa3.1□□□□□ -1.91
RNU6-28P-201ENST00000362378 TOM1L1O75674 476 aa3.1□□□□□ -1.91
RNU6-28P-201ENST00000362378 AK1P00568 194 aa3.1□□□□□ -1.91
RNU6-28P-201ENST00000362378 IGHG1P01857 330 aa3.1□□□□□ -1.91
RNU6-28P-201ENST00000362378 RRASP10301 218 aa3.1□□□□□ -1.91
RNU6-28P-201ENST00000362378 NCF1P14598 390 aaPredicted RBP3.1□□□□□ -1.91
RNU6-28P-201ENST00000362378 FOSL2P15408 326 aa3.1□□□□□ -1.91
RNU6-28P-201ENST00000362378 CD1DP15813 335 aa3.1□□□□□ -1.91
RNU6-28P-201ENST00000362378 UGT1A4P22310 534 aa3.1□□□□□ -1.91
RNU6-28P-201ENST00000362378 SLC1A6P48664 564 aa3.1□□□□□ -1.91
RNU6-28P-201ENST00000362378 MTTPP55157 894 aa3.1□□□□□ -1.91
RNU6-28P-201ENST00000362378 FKBP3Q00688 224 aaKnown RBP3.1□□□□□ -1.91
RNU6-28P-201ENST00000362378 HSF2Q03933 536 aa3.1□□□□□ -1.91
RNU6-28P-201ENST00000362378 ENPP2Q13822 863 aa3.1□□□□□ -1.91
RNU6-28P-201ENST00000362378 ECSCRQ19T08 205 aa3.1□□□□□ -1.91
RNU6-28P-201ENST00000362378 ZNF699Q32M78 642 aa3.1□□□□□ -1.91
RNU6-28P-201ENST00000362378 MS4A18Q3C1V0 323 aa3.1□□□□□ -1.91
RNU6-28P-201ENST00000362378 ADPRMQ3LIE5 342 aa3.1□□□□□ -1.91
RNU6-28P-201ENST00000362378 WDR25Q64LD2 544 aaPredicted RBP3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms