RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 C1orf167Q5SNV9 1468 aa12.68□□□□□ -0.38
SRGAP3-201ENST00000360413 HPRP00739 348 aa12.68□□□□□ -0.38
SRGAP3-201ENST00000360413 DRD5P21918 477 aa12.68□□□□□ -0.38
SRGAP3-201ENST00000360413 LRP8Q14114 963 aa12.68□□□□□ -0.38
SRGAP3-201ENST00000360413 RAB30Q15771 203 aa12.68□□□□□ -0.38
SRGAP3-201ENST00000360413 SDHAF4Q5VUM1 108 aa12.68□□□□□ -0.38
SRGAP3-201ENST00000360413 DRICH1Q6PGQ1 229 aaPredicted RBP12.68□□□□□ -0.38
SRGAP3-201ENST00000360413 ZNF574Q6ZN55 896 aaPredicted RBP12.68□□□□□ -0.38
SRGAP3-201ENST00000360413 VPS25Q9BRG1 176 aa12.68□□□□□ -0.38
SRGAP3-201ENST00000360413 SLC32A1Q9H598 525 aa12.68□□□□□ -0.38
SRGAP3-201ENST00000360413 TRAPPC13A5PLN9 417 aa12.68□□□□□ -0.38
SRGAP3-201ENST00000360413 CCDC85CA6NKD9 419 aa12.68□□□□□ -0.38
SRGAP3-201ENST00000360413 SHOXO15266 292 aa12.68□□□□□ -0.38
SRGAP3-201ENST00000360413 HBQ1P09105 142 aa12.68□□□□□ -0.38
SRGAP3-201ENST00000360413 CCNOP22674 350 aa12.68□□□□□ -0.38
SRGAP3-201ENST00000360413 ASPAP45381 313 aa12.68□□□□□ -0.38
SRGAP3-201ENST00000360413 RAB11BQ15907 218 aa12.68□□□□□ -0.38
SRGAP3-201ENST00000360413 SFRP4Q6FHJ7 346 aaPredicted RBP12.68□□□□□ -0.38
SRGAP3-201ENST00000360413 CELF5Q8N6W0 485 aaKnown RBP12.68□□□□□ -0.38
SRGAP3-201ENST00000360413 GPR152Q8TDT2 470 aa12.68□□□□□ -0.38
SRGAP3-201ENST00000360413 HAS2Q92819 552 aa12.68□□□□□ -0.38
SRGAP3-201ENST00000360413 ZBTB20Q9HC78 741 aaPredicted RBP12.68□□□□□ -0.38
SRGAP3-201ENST00000360413 RHCGQ9UBD6 479 aa12.68□□□□□ -0.38
SRGAP3-201ENST00000360413 LTN1O94822 1766 aa12.68□□□□□ -0.38
SRGAP3-201ENST00000360413 FRKP42685 505 aaPredicted RBP12.68□□□□□ -0.38
SRGAP3-201ENST00000360413 SOX2P48431 317 aa12.68□□□□□ -0.38
SRGAP3-201ENST00000360413 THBS3P49746 956 aa12.68□□□□□ -0.38
SRGAP3-201ENST00000360413 PCBP2Q15366 365 aaKnown RBP eCLIP12.68□□□□□ -0.38
SRGAP3-201ENST00000360413 SLC35F1Q5T1Q4 408 aa12.68□□□□□ -0.38
SRGAP3-201ENST00000360413 METTL11BQ5VVY1 283 aa12.68□□□□□ -0.38
SRGAP3-201ENST00000360413 ZSWIM9Q86XI8 627 aa12.68□□□□□ -0.38
SRGAP3-201ENST00000360413 DAZLQ92904 295 aaKnown RBP12.68□□□□□ -0.38
SRGAP3-201ENST00000360413 PSD2Q9BQI7 771 aa12.68□□□□□ -0.38
SRGAP3-201ENST00000360413 ZDHHC3Q9NYG2 299 aa12.68□□□□□ -0.38
SRGAP3-201ENST00000360413 GMEB2Q9UKD1 530 aa12.68□□□□□ -0.38
SRGAP3-201ENST00000360413 PTPRMP28827 1452 aa12.67□□□□□ -0.38
SRGAP3-201ENST00000360413 A0A1W2PQL4 384 aaPredicted RBP12.67□□□□□ -0.38
SRGAP3-201ENST00000360413 SNRNP70P08621 437 aaKnown RBP12.67□□□□□ -0.38
SRGAP3-201ENST00000360413 VEGFCP49767 419 aa12.67□□□□□ -0.38
SRGAP3-201ENST00000360413 RUNX2Q13950 521 aa12.67□□□□□ -0.38
SRGAP3-201ENST00000360413 FAM110CQ1W6H9 321 aa12.67□□□□□ -0.38
SRGAP3-201ENST00000360413 HS3ST5Q8IZT8 346 aa12.67□□□□□ -0.38
SRGAP3-201ENST00000360413 PAPD5Q8NDF8 572 aaKnown RBP12.67□□□□□ -0.38
SRGAP3-201ENST00000360413 NDRG1Q92597 394 aaKnown RBP12.67□□□□□ -0.38
SRGAP3-201ENST00000360413 MGLLQ99685 303 aa12.67□□□□□ -0.38
SRGAP3-201ENST00000360413 LHPPQ9H008 270 aa12.67□□□□□ -0.38
SRGAP3-201ENST00000360413 EIF2B1Q14232 305 aaKnown RBP12.67□□□□□ -0.38
SRGAP3-201ENST00000360413 RCBTB1Q8NDN9 531 aa12.67□□□□□ -0.38
SRGAP3-201ENST00000360413 ZNF395Q9H8N7 513 aaPredicted RBP12.67□□□□□ -0.38
SRGAP3-201ENST00000360413 SOCS2O14508 198 aa12.67□□□□□ -0.38
SRGAP3-201ENST00000360413 DUSP11O75319 330 aaKnown RBP12.67□□□□□ -0.38
SRGAP3-201ENST00000360413 NRLP54845 237 aa12.67□□□□□ -0.38
SRGAP3-201ENST00000360413 GAS6Q14393 721 aa12.67□□□□□ -0.38
SRGAP3-201ENST00000360413 TRAM2Q15035 370 aa12.67□□□□□ -0.38
SRGAP3-201ENST00000360413 CATSPEREQ5SY80 951 aa12.67□□□□□ -0.38
SRGAP3-201ENST00000360413 FRG2Q64ET8 278 aa12.67□□□□□ -0.38
SRGAP3-201ENST00000360413 KIAA0930Q6ICG6 404 aaPredicted RBP12.67□□□□□ -0.38
SRGAP3-201ENST00000360413 TMPRSS12Q86WS5 348 aa12.67□□□□□ -0.38
SRGAP3-201ENST00000360413 NDNFQ8TB73 568 aa12.67□□□□□ -0.38
SRGAP3-201ENST00000360413 FRG2BQ96QU4 278 aa12.67□□□□□ -0.38
SRGAP3-201ENST00000360413 STXBP5LQ9Y2K9 1186 aa12.67□□□□□ -0.38
SRGAP3-201ENST00000360413 PIK3C2BO00750 1634 aa12.67□□□□□ -0.38
SRGAP3-201ENST00000360413 LOC102723532A0A0G2JNH3 316 aa12.67□□□□□ -0.38
SRGAP3-201ENST00000360413 ANKRD34BA5PLL1 514 aa12.67□□□□□ -0.38
SRGAP3-201ENST00000360413 BLOC1S5-TXNDC5H3BN57 136 aa12.67□□□□□ -0.38
SRGAP3-201ENST00000360413 CLN5O75503 358 aa12.67□□□□□ -0.38
SRGAP3-201ENST00000360413 HEXBP07686 556 aa12.67□□□□□ -0.38
SRGAP3-201ENST00000360413 ZDHHC11BP0C7U3 371 aa12.67□□□□□ -0.38
SRGAP3-201ENST00000360413 KCNC4Q03721 635 aa12.67□□□□□ -0.38
SRGAP3-201ENST00000360413 ZNF100Q8IYN0 542 aa12.67□□□□□ -0.38
SRGAP3-201ENST00000360413 GNPDA2Q8TDQ7 276 aa12.67□□□□□ -0.38
SRGAP3-201ENST00000360413 QRSL1Q9H0R6 528 aaKnown RBP12.67□□□□□ -0.38
SRGAP3-201ENST00000360413 DHDHQ9UQ10 334 aa12.67□□□□□ -0.38
SRGAP3-201ENST00000360413 PCDHGA6Q9Y5G7 932 aa12.67□□□□□ -0.38
SRGAP3-201ENST00000360413 RPS10-NUDT3A0A1W2PQS6 291 aa12.67□□□□□ -0.38
SRGAP3-201ENST00000360413 M0R2N6 131 aa12.67□□□□□ -0.38
SRGAP3-201ENST00000360413 SIX3O95343 332 aaPredicted RBP12.67□□□□□ -0.38
SRGAP3-201ENST00000360413 TPT1P13693 172 aaKnown RBP12.67□□□□□ -0.38
SRGAP3-201ENST00000360413 RPS10P46783 165 aaKnown RBP12.67□□□□□ -0.38
SRGAP3-201ENST00000360413 GPR143P51810 404 aa12.67□□□□□ -0.38
SRGAP3-201ENST00000360413 RGMBQ6NW40 437 aa12.67□□□□□ -0.38
SRGAP3-201ENST00000360413 IGFN1Q86VF2 1251 aa12.67□□□□□ -0.38
SRGAP3-201ENST00000360413 UPRTQ96BW1 309 aa12.67□□□□□ -0.38
SRGAP3-201ENST00000360413 XPNPEP1Q9NQW7 623 aa12.67□□□□□ -0.38
SRGAP3-201ENST00000360413 LIPT1Q9Y234 373 aa12.67□□□□□ -0.38
SRGAP3-201ENST00000360413 A8MT66 165 aa12.67□□□□□ -0.38
SRGAP3-201ENST00000360413 TGM5O43548 720 aa12.67□□□□□ -0.38
SRGAP3-201ENST00000360413 BRINP1O60477 761 aa12.67□□□□□ -0.38
SRGAP3-201ENST00000360413 PRAMEF2O60811 474 aa12.67□□□□□ -0.38
SRGAP3-201ENST00000360413 RPS17P08708 135 aaKnown RBP12.67□□□□□ -0.38
SRGAP3-201ENST00000360413 UCHL1P09936 223 aa12.67□□□□□ -0.38
SRGAP3-201ENST00000360413 GJA5P36382 358 aa12.67□□□□□ -0.38
SRGAP3-201ENST00000360413 HLCSP50747 726 aa12.67□□□□□ -0.38
SRGAP3-201ENST00000360413 NLRP8Q86W28 1048 aa12.67□□□□□ -0.38
SRGAP3-201ENST00000360413 OR5H6Q8NGV6 325 aa12.67□□□□□ -0.38
SRGAP3-201ENST00000360413 PYCR2Q96C36 320 aa12.67□□□□□ -0.38
SRGAP3-201ENST00000360413 FAM118AQ9NWS6 357 aa12.67□□□□□ -0.38
SRGAP3-201ENST00000360413 SUSD2Q9UGT4 822 aa12.67□□□□□ -0.38
SRGAP3-201ENST00000360413 LYRM1O43325 122 aa12.67□□□□□ -0.38
SRGAP3-201ENST00000360413 AK1P00568 194 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms