RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 MGLLQ99685 303 aa15.35■□□□□ 0.05
COL18A1-203ENST00000359759 URM1Q9BTM9 101 aaKnown RBP15.35■□□□□ 0.05
COL18A1-203ENST00000359759 IFNA10P01566 189 aa15.35■□□□□ 0.05
COL18A1-203ENST00000359759 GCGRP47871 477 aa15.35■□□□□ 0.05
COL18A1-203ENST00000359759 RIDAP52758 137 aaKnown RBP15.35■□□□□ 0.05
COL18A1-203ENST00000359759 SELENOVP59797 346 aa15.35■□□□□ 0.05
COL18A1-203ENST00000359759 LRR1Q96L50 414 aa15.35■□□□□ 0.05
COL18A1-203ENST00000359759 PEBP4Q96S96 227 aa15.35■□□□□ 0.05
COL18A1-203ENST00000359759 PITX2Q99697 317 aa15.35■□□□□ 0.05
COL18A1-203ENST00000359759 LMTK2Q8IWU2 1503 aa15.35■□□□□ 0.05
COL18A1-203ENST00000359759 PRICKLE3O43900 615 aaPredicted RBP15.35■□□□□ 0.05
COL18A1-203ENST00000359759 GGT2P36268 569 aa15.35■□□□□ 0.05
COL18A1-203ENST00000359759 ART1P52961 327 aa15.35■□□□□ 0.05
COL18A1-203ENST00000359759 NKX6-1P78426 367 aaPredicted RBP15.35■□□□□ 0.05
COL18A1-203ENST00000359759 CRHR2Q13324 411 aa15.35■□□□□ 0.05
COL18A1-203ENST00000359759 RSU1Q15404 277 aa15.35■□□□□ 0.05
COL18A1-203ENST00000359759 FAM180BQ6P0A1 224 aa15.35■□□□□ 0.05
COL18A1-203ENST00000359759 KCTD18Q6PI47 426 aaPredicted RBP15.35■□□□□ 0.05
COL18A1-203ENST00000359759 PXKQ7Z7A4 578 aa15.35■□□□□ 0.05
COL18A1-203ENST00000359759 FKBP10Q96AY3 582 aa15.35■□□□□ 0.05
COL18A1-203ENST00000359759 SDSLQ96GA7 329 aa15.35■□□□□ 0.05
COL18A1-203ENST00000359759 KAT6AQ92794 2004 aa15.35■□□□□ 0.05
COL18A1-203ENST00000359759 A0A096LPI6 279 aa15.34■□□□□ 0.05
COL18A1-203ENST00000359759 HSBP1L1C9JCN9 74 aa15.34■□□□□ 0.05
COL18A1-203ENST00000359759 KLF11O14901 512 aa15.34■□□□□ 0.05
COL18A1-203ENST00000359759 GRID2O43424 1007 aa15.34■□□□□ 0.05
COL18A1-203ENST00000359759 DIRAS3O95661 229 aa15.34■□□□□ 0.05
COL18A1-203ENST00000359759 UCHL1P09936 223 aa15.34■□□□□ 0.05
COL18A1-203ENST00000359759 ATP4BP51164 291 aa15.34■□□□□ 0.05
COL18A1-203ENST00000359759 CLCN2P51788 898 aa15.34■□□□□ 0.05
COL18A1-203ENST00000359759 AKR1C2P52895 323 aa15.34■□□□□ 0.05
COL18A1-203ENST00000359759 GK2Q14410 553 aaPredicted RBP15.34■□□□□ 0.05
COL18A1-203ENST00000359759 AKR1C8PQ5T2L2 129 aa15.34■□□□□ 0.05
COL18A1-203ENST00000359759 TREML1Q86YW5 311 aa15.34■□□□□ 0.05
COL18A1-203ENST00000359759 SLC15A4Q8N697 577 aa15.34■□□□□ 0.05
COL18A1-203ENST00000359759 FUNDC2Q9BWH2 189 aa15.34■□□□□ 0.05
COL18A1-203ENST00000359759 C19orf25Q9UFG5 118 aaPredicted RBP15.34■□□□□ 0.05
COL18A1-203ENST00000359759 MEIS3P1A6NDR6 274 aa15.34■□□□□ 0.05
COL18A1-203ENST00000359759 PAK4O96013 591 aaPredicted RBP15.34■□□□□ 0.05
COL18A1-203ENST00000359759 SNHG28P0DPA3 235 aa15.34■□□□□ 0.05
COL18A1-203ENST00000359759 PRKACAP17612 351 aa15.34■□□□□ 0.05
COL18A1-203ENST00000359759 TNFRSF1BP20333 461 aa15.34■□□□□ 0.05
COL18A1-203ENST00000359759 BMXP51813 675 aa15.34■□□□□ 0.05
COL18A1-203ENST00000359759 FIGNL1Q6PIW4 674 aa15.34■□□□□ 0.05
COL18A1-203ENST00000359759 TMPPEQ6ZT21 453 aa15.34■□□□□ 0.05
COL18A1-203ENST00000359759 DCUN1D3Q8IWE4 304 aa15.34■□□□□ 0.05
COL18A1-203ENST00000359759 ARHGAP12Q8IWW6 846 aa15.34■□□□□ 0.05
COL18A1-203ENST00000359759 IQCF1Q8N6M8 205 aa15.34■□□□□ 0.05
COL18A1-203ENST00000359759 NLGN4YQ8NFZ3 816 aaPredicted RBP15.34■□□□□ 0.05
COL18A1-203ENST00000359759 MYRFLQ96LU7 910 aa15.34■□□□□ 0.05
COL18A1-203ENST00000359759 ADAMTS10Q9H324 1103 aa15.34■□□□□ 0.05
COL18A1-203ENST00000359759 KLHL9Q9P2J3 617 aa15.34■□□□□ 0.05
COL18A1-203ENST00000359759 ETV5P41161 510 aa15.34■□□□□ 0.05
COL18A1-203ENST00000359759 GRIA2P42262 883 aa15.34■□□□□ 0.05
COL18A1-203ENST00000359759 ZXDBP98169 803 aa15.34■□□□□ 0.05
COL18A1-203ENST00000359759 MRPL49Q13405 166 aaKnown RBP15.34■□□□□ 0.05
COL18A1-203ENST00000359759 GPM6BQ13491 265 aa15.34■□□□□ 0.05
COL18A1-203ENST00000359759 CCL14Q16627 93 aa15.34■□□□□ 0.05
COL18A1-203ENST00000359759 C22orf39Q6P5X5 142 aa15.34■□□□□ 0.05
COL18A1-203ENST00000359759 RCBTB1Q8NDN9 531 aa15.34■□□□□ 0.05
COL18A1-203ENST00000359759 DNMT3AQ9Y6K1 912 aaPredicted RBP15.34■□□□□ 0.05
COL18A1-203ENST00000359759 RAD1O60671 282 aa15.34■□□□□ 0.05
COL18A1-203ENST00000359759 IDH3GP51553 393 aaPredicted RBP15.34■□□□□ 0.05
COL18A1-203ENST00000359759 DNAJB13P59910 316 aa15.34■□□□□ 0.05
COL18A1-203ENST00000359759 LEG1Q6P5S2 330 aa15.34■□□□□ 0.05
COL18A1-203ENST00000359759 CHPT1Q8WUD6 406 aa15.34■□□□□ 0.05
COL18A1-203ENST00000359759 HOXB13Q92826 284 aaPredicted RBP15.34■□□□□ 0.05
COL18A1-203ENST00000359759 HSD3B7Q9H2F3 369 aa15.34■□□□□ 0.05
COL18A1-203ENST00000359759 WDR6Q9NNW5 1121 aaKnown RBP15.34■□□□□ 0.05
COL18A1-203ENST00000359759 POU2F3Q9UKI9 436 aa15.34■□□□□ 0.05
COL18A1-203ENST00000359759 DLSTP36957 453 aa15.34■□□□□ 0.05
COL18A1-203ENST00000359759 MAP4K2Q12851 820 aa15.34■□□□□ 0.05
COL18A1-203ENST00000359759 BCL2A1Q16548 175 aa15.34■□□□□ 0.05
COL18A1-203ENST00000359759 OR5H2Q8NGV7 314 aa15.34■□□□□ 0.05
COL18A1-203ENST00000359759 CNN2Q99439 309 aaKnown RBP15.34■□□□□ 0.05
COL18A1-203ENST00000359759 FAM124BQ9H5Z6 455 aaPredicted RBP15.34■□□□□ 0.05
COL18A1-203ENST00000359759 BIN3Q9NQY0 253 aa15.34■□□□□ 0.05
COL18A1-203ENST00000359759 IQGAP1P46940 1657 aa15.34■□□□□ 0.05
COL18A1-203ENST00000359759 AOC2O75106 756 aa15.33■□□□□ 0.05
COL18A1-203ENST00000359759 INHAP05111 366 aa15.33■□□□□ 0.05
COL18A1-203ENST00000359759 RAB6AP20340 208 aa15.33■□□□□ 0.05
COL18A1-203ENST00000359759 SPHARQ15513 63 aa15.33■□□□□ 0.05
COL18A1-203ENST00000359759 RAET1LQ5VY80 246 aa15.33■□□□□ 0.05
COL18A1-203ENST00000359759 TOR1AIP2Q8NFQ8 470 aa15.33■□□□□ 0.05
COL18A1-203ENST00000359759 OR52P1PQ8NH57 321 aa15.33■□□□□ 0.05
COL18A1-203ENST00000359759 FUBP3Q96I24 572 aaKnown RBP eCLIP15.33■□□□□ 0.05
COL18A1-203ENST00000359759 SAMD11Q96NU1 681 aa15.33■□□□□ 0.05
COL18A1-203ENST00000359759 CDC6Q99741 560 aa15.33■□□□□ 0.05
COL18A1-203ENST00000359759 FANCFQ9NPI8 374 aa15.33■□□□□ 0.05
COL18A1-203ENST00000359759 PPP4R1LQ9P1A2 415 aa15.33■□□□□ 0.05
COL18A1-203ENST00000359759 ZNF223Q9UK11 482 aaPredicted RBP15.33■□□□□ 0.05
COL18A1-203ENST00000359759 IFNA17P01571 189 aa15.33■□□□□ 0.05
COL18A1-203ENST00000359759 CRISP1P54107 249 aa15.33■□□□□ 0.05
COL18A1-203ENST00000359759 C6orf136Q5SQH8 315 aa15.33■□□□□ 0.05
COL18A1-203ENST00000359759 HRASLS2Q9NWW9 162 aa15.33■□□□□ 0.05
COL18A1-203ENST00000359759 A0A0G2JMP0 313 aa15.33■□□□□ 0.04
COL18A1-203ENST00000359759 FAM171A2A8MVW0 826 aa15.33■□□□□ 0.04
COL18A1-203ENST00000359759 ATE1O95260 518 aa15.33■□□□□ 0.04
COL18A1-203ENST00000359759 HOXB2P14652 356 aa15.33■□□□□ 0.04
COL18A1-203ENST00000359759 ETV3P41162 512 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms