RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 CHI3L1P36222 383 aaPredicted RBP11.96□□□□□ -0.49
GGPS1-202ENST00000358966 VAC14Q08AM6 782 aa11.96□□□□□ -0.49
GGPS1-202ENST00000358966 SLAMF1Q13291 335 aa11.96□□□□□ -0.49
GGPS1-202ENST00000358966 ZIK1Q3SY52 487 aaPredicted RBP11.96□□□□□ -0.49
GGPS1-202ENST00000358966 SPATS1Q496A3 300 aa11.96□□□□□ -0.49
GGPS1-202ENST00000358966 FAM98BQ52LJ0 330 aaKnown RBP11.96□□□□□ -0.49
GGPS1-202ENST00000358966 TNFAIP8L2Q6P589 184 aaPredicted RBP11.96□□□□□ -0.49
GGPS1-202ENST00000358966 PRSS41Q7RTY9 318 aa11.96□□□□□ -0.49
GGPS1-202ENST00000358966 ANKFN1Q8N957 763 aa11.96□□□□□ -0.49
GGPS1-202ENST00000358966 FAM47BQ8NA70 645 aa11.96□□□□□ -0.49
GGPS1-202ENST00000358966 MINDY2Q8NBR6 621 aa11.96□□□□□ -0.49
GGPS1-202ENST00000358966 ZNF420Q8TAQ5 688 aaPredicted RBP11.96□□□□□ -0.49
GGPS1-202ENST00000358966 IER2Q9BTL4 223 aa11.96□□□□□ -0.49
GGPS1-202ENST00000358966 VNN3Q9NY84 501 aa11.96□□□□□ -0.49
GGPS1-202ENST00000358966 MRPS2Q9Y399 296 aaKnown RBP11.96□□□□□ -0.49
GGPS1-202ENST00000358966 A0A0A6YYD5 115 aa11.96□□□□□ -0.49
GGPS1-202ENST00000358966 CHURC1-FNTBB4DL54 471 aa11.96□□□□□ -0.49
GGPS1-202ENST00000358966 MEN1O00255 615 aa11.96□□□□□ -0.49
GGPS1-202ENST00000358966 SLC22A1O15245 554 aa11.96□□□□□ -0.49
GGPS1-202ENST00000358966 ASNA1O43681 348 aa11.96□□□□□ -0.49
GGPS1-202ENST00000358966 NOBOXO60393 691 aa11.96□□□□□ -0.49
GGPS1-202ENST00000358966 NDUFS2O75306 463 aa11.96□□□□□ -0.49
GGPS1-202ENST00000358966 GCM2O75603 506 aaPredicted RBP11.96□□□□□ -0.49
GGPS1-202ENST00000358966 CST1P01037 141 aa11.96□□□□□ -0.49
GGPS1-202ENST00000358966 OPRL1P41146 370 aa11.96□□□□□ -0.49
GGPS1-202ENST00000358966 CCR5P51681 352 aa11.96□□□□□ -0.49
GGPS1-202ENST00000358966 TXNL4AP83876 142 aaKnown RBP11.96□□□□□ -0.49
GGPS1-202ENST00000358966 ZP2Q05996 745 aa11.96□□□□□ -0.49
GGPS1-202ENST00000358966 ATP6AP1Q15904 470 aa11.96□□□□□ -0.49
GGPS1-202ENST00000358966 ANXA8L1Q5VT79 327 aa11.96□□□□□ -0.49
GGPS1-202ENST00000358966 SLX4IPQ5VYV7 408 aa11.96□□□□□ -0.49
GGPS1-202ENST00000358966 FBXO42Q6P3S6 717 aa11.96□□□□□ -0.49
GGPS1-202ENST00000358966 KCTD20Q7Z5Y7 419 aa11.96□□□□□ -0.49
GGPS1-202ENST00000358966 SERPINA11Q86U17 422 aa11.96□□□□□ -0.49
GGPS1-202ENST00000358966 OFCC1Q8IZS5 231 aa11.96□□□□□ -0.49
GGPS1-202ENST00000358966 ACOT4Q8N9L9 421 aa11.96□□□□□ -0.49
GGPS1-202ENST00000358966 HDAC2Q92769 488 aaKnown RBP11.96□□□□□ -0.49
GGPS1-202ENST00000358966 RAB8BQ92930 207 aa11.96□□□□□ -0.49
GGPS1-202ENST00000358966 RNF31Q96EP0 1072 aa11.96□□□□□ -0.49
GGPS1-202ENST00000358966 FBXL20Q96IG2 436 aa11.96□□□□□ -0.49
GGPS1-202ENST00000358966 BARD1Q99728 777 aaKnown RBP11.96□□□□□ -0.49
GGPS1-202ENST00000358966 CHST8Q9H2A9 424 aa11.96□□□□□ -0.49
GGPS1-202ENST00000358966 NARFLQ9H6Q4 476 aa11.96□□□□□ -0.49
GGPS1-202ENST00000358966 TMEM184CQ9NVA4 438 aa11.96□□□□□ -0.49
GGPS1-202ENST00000358966 HRASLS2Q9NWW9 162 aa11.96□□□□□ -0.49
GGPS1-202ENST00000358966 SIRT5Q9NXA8 310 aa11.96□□□□□ -0.49
GGPS1-202ENST00000358966 TAS2R9Q9NYW1 312 aa11.96□□□□□ -0.49
GGPS1-202ENST00000358966 ACTR10Q9NZ32 417 aa11.96□□□□□ -0.49
GGPS1-202ENST00000358966 AHSPQ9NZD4 102 aa11.96□□□□□ -0.49
GGPS1-202ENST00000358966 CEP192Q8TEP8 1941 aa11.96□□□□□ -0.5
GGPS1-202ENST00000358966 A0A1W2PR48 441 aa11.95□□□□□ -0.5
GGPS1-202ENST00000358966 ERVH48-1M5A8F1 160 aa11.95□□□□□ -0.5
GGPS1-202ENST00000358966 CLEC3AO75596 197 aa11.95□□□□□ -0.5
GGPS1-202ENST00000358966 CLPXO76031 633 aa11.95□□□□□ -0.5
GGPS1-202ENST00000358966 SEMA3DO95025 777 aa11.95□□□□□ -0.5
GGPS1-202ENST00000358966 SNAP29O95721 258 aa11.95□□□□□ -0.5
GGPS1-202ENST00000358966 ZNF888P0CJ79 500 aaPredicted RBP11.95□□□□□ -0.5
GGPS1-202ENST00000358966 DBTP11182 482 aaKnown RBP11.95□□□□□ -0.5
GGPS1-202ENST00000358966 IL1RNP18510 177 aa11.95□□□□□ -0.5
GGPS1-202ENST00000358966 ITIH1P19827 911 aa11.95□□□□□ -0.5
GGPS1-202ENST00000358966 PPM1FP49593 454 aaPredicted RBP11.95□□□□□ -0.5
GGPS1-202ENST00000358966 CSNK1EP49674 416 aaKnown RBP11.95□□□□□ -0.5
GGPS1-202ENST00000358966 MANFP55145 182 aaKnown RBP11.95□□□□□ -0.5
GGPS1-202ENST00000358966 HHEXQ03014 270 aa11.95□□□□□ -0.5
GGPS1-202ENST00000358966 SRSF5Q13243 272 aaKnown RBP11.95□□□□□ -0.5
GGPS1-202ENST00000358966 PMS2P3Q13401 168 aa11.95□□□□□ -0.5
GGPS1-202ENST00000358966 ZIC1Q15915 447 aa11.95□□□□□ -0.5
GGPS1-202ENST00000358966 C10orf62Q5T681 223 aaPredicted RBP11.95□□□□□ -0.5
GGPS1-202ENST00000358966 ABHD17CQ6PCB6 329 aa11.95□□□□□ -0.5
GGPS1-202ENST00000358966 MSANTD1Q6ZTZ1 278 aa11.95□□□□□ -0.5
GGPS1-202ENST00000358966 PARGQ86W56 976 aa11.95□□□□□ -0.5
GGPS1-202ENST00000358966 PAQR7Q86WK9 346 aa11.95□□□□□ -0.5
GGPS1-202ENST00000358966 PAPD5Q8NDF8 572 aaKnown RBP11.95□□□□□ -0.5
GGPS1-202ENST00000358966 ZNF597Q96LX8 424 aa11.95□□□□□ -0.5
GGPS1-202ENST00000358966 ZNF347Q96SE7 839 aa11.95□□□□□ -0.5
GGPS1-202ENST00000358966 SMURF2Q9HAU4 748 aa11.95□□□□□ -0.5
GGPS1-202ENST00000358966 PRDM7Q9NQW5 492 aa11.95□□□□□ -0.5
GGPS1-202ENST00000358966 POLE4Q9NR33 117 aa11.95□□□□□ -0.5
GGPS1-202ENST00000358966 PNPLA3Q9NST1 481 aa11.95□□□□□ -0.5
GGPS1-202ENST00000358966 NOSIPQ9Y314 301 aaKnown RBP11.95□□□□□ -0.5
GGPS1-202ENST00000358966 A0A087WXM4 84 aa11.95□□□□□ -0.5
GGPS1-202ENST00000358966 ATP6V1G2-DDX39BF2Z307 99 aa11.95□□□□□ -0.5
GGPS1-202ENST00000358966 SCELO95171 688 aa11.95□□□□□ -0.5
GGPS1-202ENST00000358966 MYF5P13349 255 aa11.95□□□□□ -0.5
GGPS1-202ENST00000358966 FEN1P39748 380 aaKnown RBP11.95□□□□□ -0.5
GGPS1-202ENST00000358966 CBX5P45973 191 aa11.95□□□□□ -0.5
GGPS1-202ENST00000358966 SLC9A3P48764 834 aa11.95□□□□□ -0.5
GGPS1-202ENST00000358966 BTN3A2P78410 334 aa11.95□□□□□ -0.5
GGPS1-202ENST00000358966 VLDLRP98155 873 aa11.95□□□□□ -0.5
GGPS1-202ENST00000358966 DEFB134Q4QY38 66 aa11.95□□□□□ -0.5
GGPS1-202ENST00000358966 RPS26P11Q5JNZ5 115 aaPredicted RBP11.95□□□□□ -0.5
GGPS1-202ENST00000358966 FCRL6Q6DN72 434 aa11.95□□□□□ -0.5
GGPS1-202ENST00000358966 R3HCC1LQ7Z5L2 792 aaKnown RBP11.95□□□□□ -0.5
GGPS1-202ENST00000358966 NFKBIDQ8NI38 313 aa11.95□□□□□ -0.5
GGPS1-202ENST00000358966 MSANTD3Q96H12 275 aa11.95□□□□□ -0.5
GGPS1-202ENST00000358966 TXNDC15Q96J42 360 aa11.95□□□□□ -0.5
GGPS1-202ENST00000358966 MUTYHQ9UIF7 546 aa11.95□□□□□ -0.5
GGPS1-202ENST00000358966 CACNA1EQ15878 2313 aa11.95□□□□□ -0.5
GGPS1-202ENST00000358966 A0A0B4J203 849 aa11.95□□□□□ -0.5
GGPS1-202ENST00000358966 AGRPO00253 132 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms