RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 ASB4Q9Y574 426 aa21.04■□□□□ 0.96
NKX2-1-201ENST00000354822 A0A1W2PQU0 124 aa21.03■□□□□ 0.96
NKX2-1-201ENST00000354822 A0A1W2PRQ8 180 aa21.03■□□□□ 0.96
NKX2-1-201ENST00000354822 PDZK1P1A8MUH7 402 aa21.03■□□□□ 0.96
NKX2-1-201ENST00000354822 ZW10O43264 779 aa21.03■□□□□ 0.96
NKX2-1-201ENST00000354822 ERI3O43414 337 aaKnown RBP21.03■□□□□ 0.96
NKX2-1-201ENST00000354822 LATO43561 262 aa21.03■□□□□ 0.96
NKX2-1-201ENST00000354822 PLRG1O43660 514 aaKnown RBP21.03■□□□□ 0.96
NKX2-1-201ENST00000354822 UGT2B17O75795 530 aa21.03■□□□□ 0.96
NKX2-1-201ENST00000354822 GDI1P31150 447 aa21.03■□□□□ 0.96
NKX2-1-201ENST00000354822 PSMD7P51665 324 aa21.03■□□□□ 0.96
NKX2-1-201ENST00000354822 PPP5CP53041 499 aa21.03■□□□□ 0.96
NKX2-1-201ENST00000354822 HYAL2Q12891 473 aa21.03■□□□□ 0.96
NKX2-1-201ENST00000354822 FOXD4Q12950 439 aaPredicted RBP21.03■□□□□ 0.96
NKX2-1-201ENST00000354822 TIMM50Q3ZCQ8 353 aa21.03■□□□□ 0.96
NKX2-1-201ENST00000354822 ANKRD54Q6NXT1 300 aa21.03■□□□□ 0.96
NKX2-1-201ENST00000354822 OR14C36Q8NHC7 312 aa21.03■□□□□ 0.96
NKX2-1-201ENST00000354822 FUZQ9BT04 418 aa21.03■□□□□ 0.96
NKX2-1-201ENST00000354822 SLC25A19Q9HC21 320 aa21.03■□□□□ 0.96
NKX2-1-201ENST00000354822 FZD3Q9NPG1 666 aa21.03■□□□□ 0.96
NKX2-1-201ENST00000354822 MOSPD1Q9UJG1 213 aa21.03■□□□□ 0.96
NKX2-1-201ENST00000354822 IFT52Q9Y366 437 aa21.03■□□□□ 0.96
NKX2-1-201ENST00000354822 PRAMEF27A3QJZ7 478 aa21.03■□□□□ 0.96
NKX2-1-201ENST00000354822 PPM1DO15297 605 aa21.03■□□□□ 0.96
NKX2-1-201ENST00000354822 CD40LGP29965 261 aa21.03■□□□□ 0.96
NKX2-1-201ENST00000354822 MAGEA10P43363 369 aaPredicted RBP21.03■□□□□ 0.96
NKX2-1-201ENST00000354822 XKP51811 444 aa21.03■□□□□ 0.96
NKX2-1-201ENST00000354822 ALDH6A1Q02252 535 aaKnown RBP21.03■□□□□ 0.96
NKX2-1-201ENST00000354822 CKAP5Q14008 2032 aa21.03■□□□□ 0.96
NKX2-1-201ENST00000354822 PRAMEF8Q5VWM4 474 aa21.03■□□□□ 0.96
NKX2-1-201ENST00000354822 PRAMEF7Q5VXH5 474 aa21.03■□□□□ 0.96
NKX2-1-201ENST00000354822 MEDAGQ5VYS4 303 aa21.03■□□□□ 0.96
NKX2-1-201ENST00000354822 CASP12Q6UXS9 341 aa21.03■□□□□ 0.96
NKX2-1-201ENST00000354822 ACOT4Q8N9L9 421 aa21.03■□□□□ 0.96
NKX2-1-201ENST00000354822 OR2L3Q8NG85 312 aa21.03■□□□□ 0.96
NKX2-1-201ENST00000354822 FAM131CQ96AQ9 280 aa21.03■□□□□ 0.96
NKX2-1-201ENST00000354822 ELSPBP1Q96BH3 223 aa21.03■□□□□ 0.96
NKX2-1-201ENST00000354822 APOOQ9BUR5 198 aa21.03■□□□□ 0.96
NKX2-1-201ENST00000354822 POLR2J3Q9H1A7 115 aaKnown RBP21.03■□□□□ 0.96
NKX2-1-201ENST00000354822 SLC6A14Q9UN76 642 aa21.03■□□□□ 0.96
NKX2-1-201ENST00000354822 PCDHGA3Q9Y5H0 932 aa21.03■□□□□ 0.96
NKX2-1-201ENST00000354822 COLEC10Q9Y6Z7 277 aa21.03■□□□□ 0.96
NKX2-1-201ENST00000354822 CHD9Q3L8U1 2897 aa21.03■□□□□ 0.96
NKX2-1-201ENST00000354822 DOCK8Q8NF50 2099 aa21.02■□□□□ 0.96
NKX2-1-201ENST00000354822 METTL15A6NJ78 407 aa21.02■□□□□ 0.96
NKX2-1-201ENST00000354822 M0R129 80 aa21.02■□□□□ 0.96
NKX2-1-201ENST00000354822 ATP5A1P25705 553 aaKnown RBP21.02■□□□□ 0.96
NKX2-1-201ENST00000354822 CMPK1P30085 196 aa21.02■□□□□ 0.96
NKX2-1-201ENST00000354822 NDUFA9Q16795 377 aa21.02■□□□□ 0.96
NKX2-1-201ENST00000354822 TMEM201Q5SNT2 666 aa21.02■□□□□ 0.96
NKX2-1-201ENST00000354822 PGBD2Q6P3X8 592 aa21.02■□□□□ 0.96
NKX2-1-201ENST00000354822 CD300LDQ6UXZ3 194 aa21.02■□□□□ 0.96
NKX2-1-201ENST00000354822 RBM45Q8IUH3 476 aaKnown RBP21.02■□□□□ 0.96
NKX2-1-201ENST00000354822 NLGN4XQ8N0W4 816 aa21.02■□□□□ 0.96
NKX2-1-201ENST00000354822 OR56A1Q8NGH5 318 aa21.02■□□□□ 0.96
NKX2-1-201ENST00000354822 OR4D11Q8NGI4 311 aa21.02■□□□□ 0.96
NKX2-1-201ENST00000354822 OR5D16Q8NGK9 328 aa21.02■□□□□ 0.96
NKX2-1-201ENST00000354822 MYADMQ96S97 322 aa21.02■□□□□ 0.96
NKX2-1-201ENST00000354822 SLC6A20Q9NP91 592 aa21.02■□□□□ 0.96
NKX2-1-201ENST00000354822 A4GNTQ9UNA3 340 aa21.02■□□□□ 0.96
NKX2-1-201ENST00000354822 ENTPD4Q9Y227 616 aa21.02■□□□□ 0.96
NKX2-1-201ENST00000354822 A0A0G2JPF8 293 aa21.02■□□□□ 0.95
NKX2-1-201ENST00000354822 OR52A4PA6NMU1 304 aa21.02■□□□□ 0.95
NKX2-1-201ENST00000354822 HNRNPCL2B2RXH8 293 aa21.02■□□□□ 0.95
NKX2-1-201ENST00000354822 HNRNPCL3B7ZW38 293 aa21.02■□□□□ 0.95
NKX2-1-201ENST00000354822 FAM227AF5H4B4 570 aa21.02■□□□□ 0.95
NKX2-1-201ENST00000354822 LINC01565O15544 149 aa21.02■□□□□ 0.95
NKX2-1-201ENST00000354822 RNGTTO60942 597 aaKnown RBP21.02■□□□□ 0.95
NKX2-1-201ENST00000354822 HNRNPCL4P0DMR1 293 aa21.02■□□□□ 0.95
NKX2-1-201ENST00000354822 KHDRBS1Q07666 443 aaKnown RBP eCLIP21.02■□□□□ 0.95
NKX2-1-201ENST00000354822 RPE65Q16518 533 aa21.02■□□□□ 0.95
NKX2-1-201ENST00000354822 LEXMQ3ZCV2 418 aa21.02■□□□□ 0.95
NKX2-1-201ENST00000354822 C12orf73Q69YU5 71 aa21.02■□□□□ 0.95
NKX2-1-201ENST00000354822 SLC7A13Q8TCU3 470 aa21.02■□□□□ 0.95
NKX2-1-201ENST00000354822 SCARF2Q96GP6 870 aaPredicted RBP21.02■□□□□ 0.95
NKX2-1-201ENST00000354822 KXD1Q9BQD3 176 aa21.02■□□□□ 0.95
NKX2-1-201ENST00000354822 FNDC11Q9BVV2 318 aa21.02■□□□□ 0.95
NKX2-1-201ENST00000354822 RACGAP1Q9H0H5 632 aa21.02■□□□□ 0.95
NKX2-1-201ENST00000354822 KIR3DX1Q9H7L2 352 aa21.02■□□□□ 0.95
NKX2-1-201ENST00000354822 CCDC59Q9P031 241 aaKnown RBP21.02■□□□□ 0.95
NKX2-1-201ENST00000354822 MSRAQ9UJ68 235 aa21.02■□□□□ 0.95
NKX2-1-201ENST00000354822 SNX7Q9UNH6 387 aa21.02■□□□□ 0.95
NKX2-1-201ENST00000354822 PLEKHM1Q9Y4G2 1056 aa21.02■□□□□ 0.95
NKX2-1-201ENST00000354822 A0A1W2PR48 441 aa21.01■□□□□ 0.95
NKX2-1-201ENST00000354822 PRR23AA6NEV1 266 aa21.01■□□□□ 0.95
NKX2-1-201ENST00000354822 H3BN98 237 aa21.01■□□□□ 0.95
NKX2-1-201ENST00000354822 TAF4O00268 1085 aa21.01■□□□□ 0.95
NKX2-1-201ENST00000354822 HAT1O14929 419 aa21.01■□□□□ 0.95
NKX2-1-201ENST00000354822 ERAL1O75616 437 aaKnown RBP21.01■□□□□ 0.95
NKX2-1-201ENST00000354822 ALOX5P09917 674 aa21.01■□□□□ 0.95
NKX2-1-201ENST00000354822 CD72P21854 359 aa21.01■□□□□ 0.95
NKX2-1-201ENST00000354822 CDH3P22223 829 aa21.01■□□□□ 0.95
NKX2-1-201ENST00000354822 TIE1P35590 1138 aa21.01■□□□□ 0.95
NKX2-1-201ENST00000354822 IGFALSP35858 605 aa21.01■□□□□ 0.95
NKX2-1-201ENST00000354822 TGFBR1P36897 503 aa21.01■□□□□ 0.95
NKX2-1-201ENST00000354822 KIR2DL1P43626 348 aaPredicted RBP21.01■□□□□ 0.95
NKX2-1-201ENST00000354822 LIMK1P53667 647 aa21.01■□□□□ 0.95
NKX2-1-201ENST00000354822 TARDBPQ13148 414 aaKnown RBP eCLIP21.01■□□□□ 0.95
NKX2-1-201ENST00000354822 NCF4Q15080 339 aa21.01■□□□□ 0.95
NKX2-1-201ENST00000354822 MFSD9Q8NBP5 474 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms