RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 NAB1Q13506 487 aa14.56□□□□□ -0.08
PDGFA-201ENST00000354513 PCBP2Q15366 365 aaKnown RBP eCLIP14.56□□□□□ -0.08
PDGFA-201ENST00000354513 PFKFB4Q16877 469 aa14.56□□□□□ -0.08
PDGFA-201ENST00000354513 SLC25A35Q3KQZ1 300 aa14.56□□□□□ -0.08
PDGFA-201ENST00000354513 CCDC25Q86WR0 208 aa14.56□□□□□ -0.08
PDGFA-201ENST00000354513 CLYBLQ8N0X4 340 aa14.56□□□□□ -0.08
PDGFA-201ENST00000354513 L3MBTL4Q8NA19 623 aa14.56□□□□□ -0.08
PDGFA-201ENST00000354513 IFT81Q8WYA0 676 aa14.56□□□□□ -0.08
PDGFA-201ENST00000354513 RBM18Q96H35 190 aaKnown RBP14.56□□□□□ -0.08
PDGFA-201ENST00000354513 SH3GL2Q99962 352 aa14.56□□□□□ -0.08
PDGFA-201ENST00000354513 SNX15Q9NRS6 342 aa14.56□□□□□ -0.08
PDGFA-201ENST00000354513 LYARQ9NX58 379 aaKnown RBP14.56□□□□□ -0.08
PDGFA-201ENST00000354513 QPCTLQ9NXS2 382 aa14.56□□□□□ -0.08
PDGFA-201ENST00000354513 CNIH4Q9P003 139 aa14.56□□□□□ -0.08
PDGFA-201ENST00000354513 BOKQ9UMX3 212 aaPredicted RBP14.56□□□□□ -0.08
PDGFA-201ENST00000354513 ACOT9Q9Y305 439 aa14.56□□□□□ -0.08
PDGFA-201ENST00000354513 PCDHGA11Q9Y5H2 935 aa14.56□□□□□ -0.08
PDGFA-201ENST00000354513 FAM221AA4D161 298 aa14.55□□□□□ -0.08
PDGFA-201ENST00000354513 OR6C76A6NM76 312 aa14.55□□□□□ -0.08
PDGFA-201ENST00000354513 OR7A17O14581 309 aa14.55□□□□□ -0.08
PDGFA-201ENST00000354513 PGRMC2O15173 223 aa14.55□□□□□ -0.08
PDGFA-201ENST00000354513 CTAG2O75638 210 aa14.55□□□□□ -0.08
PDGFA-201ENST00000354513 GBAP04062 536 aa14.55□□□□□ -0.08
PDGFA-201ENST00000354513 CD1EP15812 388 aa14.55□□□□□ -0.08
PDGFA-201ENST00000354513 STX2P32856 288 aa14.55□□□□□ -0.08
PDGFA-201ENST00000354513 GALNSP34059 522 aa14.55□□□□□ -0.08
PDGFA-201ENST00000354513 SOX18P35713 384 aa14.55□□□□□ -0.08
PDGFA-201ENST00000354513 BUD31P41223 144 aaPredicted RBP14.55□□□□□ -0.08
PDGFA-201ENST00000354513 NEK2P51955 445 aa14.55□□□□□ -0.08
PDGFA-201ENST00000354513 ALDH18A1P54886 795 aaKnown RBP14.55□□□□□ -0.08
PDGFA-201ENST00000354513 FBXW4P57775 412 aa14.55□□□□□ -0.08
PDGFA-201ENST00000354513 CUL3Q13618 768 aa14.55□□□□□ -0.08
PDGFA-201ENST00000354513 GTF2H2Q13888 395 aa14.55□□□□□ -0.08
PDGFA-201ENST00000354513 CPSF6Q16630 551 aaKnown RBP eCLIP14.55□□□□□ -0.08
PDGFA-201ENST00000354513 ACSF3Q4G176 576 aaPredicted RBP14.55□□□□□ -0.08
PDGFA-201ENST00000354513 TECRLQ5HYJ1 363 aa14.55□□□□□ -0.08
PDGFA-201ENST00000354513 CES4AQ5XG92 561 aa14.55□□□□□ -0.08
PDGFA-201ENST00000354513 GTF2H2CQ6P1K8 395 aa14.55□□□□□ -0.08
PDGFA-201ENST00000354513 ARSKQ6UWY0 536 aa14.55□□□□□ -0.08
PDGFA-201ENST00000354513 SLC29A4Q7RTT9 530 aa14.55□□□□□ -0.08
PDGFA-201ENST00000354513 WDR53Q7Z5U6 358 aaPredicted RBP14.55□□□□□ -0.08
PDGFA-201ENST00000354513 MYLK4Q86YV6 388 aaPredicted RBP14.55□□□□□ -0.08
PDGFA-201ENST00000354513 IFT20Q8IY31 132 aa14.55□□□□□ -0.08
PDGFA-201ENST00000354513 ZZZ3Q8IYH5 903 aa14.55□□□□□ -0.08
PDGFA-201ENST00000354513 DND1Q8IYX4 353 aaKnown RBP14.55□□□□□ -0.08
PDGFA-201ENST00000354513 PLD6Q8N2A8 252 aaKnown RBP14.55□□□□□ -0.08
PDGFA-201ENST00000354513 ZNF615Q8N8J6 731 aa14.55□□□□□ -0.08
PDGFA-201ENST00000354513 C7orf57Q8NEG2 295 aa14.55□□□□□ -0.08
PDGFA-201ENST00000354513 RIT1Q92963 219 aa14.55□□□□□ -0.08
PDGFA-201ENST00000354513 CDK15Q96Q40 435 aa14.55□□□□□ -0.08
PDGFA-201ENST00000354513 PELOQ9BRX2 385 aaKnown RBP14.55□□□□□ -0.08
PDGFA-201ENST00000354513 CXXC4Q9H2H0 198 aa14.55□□□□□ -0.08
PDGFA-201ENST00000354513 UBQLN3Q9H347 655 aa14.55□□□□□ -0.08
PDGFA-201ENST00000354513 EXO5Q9H790 373 aa14.55□□□□□ -0.08
PDGFA-201ENST00000354513 ACTR8Q9H981 624 aa14.55□□□□□ -0.08
PDGFA-201ENST00000354513 CXorf21Q9HAI6 301 aa14.55□□□□□ -0.08
PDGFA-201ENST00000354513 ALKBH4Q9NXW9 302 aa14.55□□□□□ -0.08
PDGFA-201ENST00000354513 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.55□□□□□ -0.08
PDGFA-201ENST00000354513 PCDHGB3Q9Y5G1 929 aa14.55□□□□□ -0.08
PDGFA-201ENST00000354513 V9GYY5 206 aaPredicted RBP14.55□□□□□ -0.08
PDGFA-201ENST00000354513 MED12Q93074 2177 aa14.55□□□□□ -0.08
PDGFA-201ENST00000354513 MAP1AP78559 2803 aaPredicted RBP14.54□□□□□ -0.08
PDGFA-201ENST00000354513 A0A087X1B8 175 aa14.54□□□□□ -0.08
PDGFA-201ENST00000354513 UGDHO60701 494 aa14.54□□□□□ -0.08
PDGFA-201ENST00000354513 ALDOAP04075 364 aaKnown RBP14.54□□□□□ -0.08
PDGFA-201ENST00000354513 GABRA1P14867 456 aa14.54□□□□□ -0.08
PDGFA-201ENST00000354513 PTX3P26022 381 aaPredicted RBP14.54□□□□□ -0.08
PDGFA-201ENST00000354513 CEACAM8P31997 349 aaPredicted RBP14.54□□□□□ -0.08
PDGFA-201ENST00000354513 DUSP8Q13202 625 aa14.54□□□□□ -0.08
PDGFA-201ENST00000354513 DCST1Q5T197 706 aa14.54□□□□□ -0.08
PDGFA-201ENST00000354513 MROH9Q5TGP6 573 aa14.54□□□□□ -0.08
PDGFA-201ENST00000354513 TNIP2Q8NFZ5 429 aa14.54□□□□□ -0.08
PDGFA-201ENST00000354513 OR52B6Q8NGF0 335 aa14.54□□□□□ -0.08
PDGFA-201ENST00000354513 SPPL2AQ8TCT8 520 aa14.54□□□□□ -0.08
PDGFA-201ENST00000354513 ADIPOR1Q96A54 375 aa14.54□□□□□ -0.08
PDGFA-201ENST00000354513 ZNF597Q96LX8 424 aa14.54□□□□□ -0.08
PDGFA-201ENST00000354513 GPATCH1Q9BRR8 931 aaKnown RBP14.54□□□□□ -0.08
PDGFA-201ENST00000354513 DOHHQ9BU89 302 aa14.54□□□□□ -0.08
PDGFA-201ENST00000354513 TMUB1Q9BVT8 246 aa14.54□□□□□ -0.08
PDGFA-201ENST00000354513 IPPKQ9H8X2 491 aa14.54□□□□□ -0.08
PDGFA-201ENST00000354513 ZDHHC18Q9NUE0 388 aa14.54□□□□□ -0.08
PDGFA-201ENST00000354513 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.54□□□□□ -0.08
PDGFA-201ENST00000354513 DNAJB12Q9NXW2 375 aaKnown RBP14.54□□□□□ -0.08
PDGFA-201ENST00000354513 PSD3Q9NYI0 1048 aa14.54□□□□□ -0.08
PDGFA-201ENST00000354513 DTX4Q9Y2E6 619 aa14.54□□□□□ -0.08
PDGFA-201ENST00000354513 ANKHD1Q8IWZ3 2542 aaKnown RBP14.54□□□□□ -0.08
PDGFA-201ENST00000354513 MTORP42345 2549 aa14.53□□□□□ -0.08
PDGFA-201ENST00000354513 MED12LQ86YW9 2145 aa14.53□□□□□ -0.08
PDGFA-201ENST00000354513 IQANK1A0A1B0GTG1 560 aa14.53□□□□□ -0.08
PDGFA-201ENST00000354513 A0A1B0GTL3 188 aa14.53□□□□□ -0.08
PDGFA-201ENST00000354513 ANKRD33BA6NCL7 494 aa14.53□□□□□ -0.08
PDGFA-201ENST00000354513 SYCE1LA8MT33 242 aa14.53□□□□□ -0.08
PDGFA-201ENST00000354513 DYRK3O43781 588 aa14.53□□□□□ -0.08
PDGFA-201ENST00000354513 OR10H2O60403 315 aa14.53□□□□□ -0.08
PDGFA-201ENST00000354513 KLHL2O95198 593 aa14.53□□□□□ -0.08
PDGFA-201ENST00000354513 ZWINTO95229 277 aa14.53□□□□□ -0.08
PDGFA-201ENST00000354513 SLC35E2P0CK97 266 aa14.53□□□□□ -0.08
PDGFA-201ENST00000354513 GFAPP14136 432 aa14.53□□□□□ -0.08
PDGFA-201ENST00000354513 S1PR1P21453 382 aa14.53□□□□□ -0.08
PDGFA-201ENST00000354513 GDF1P27539 372 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms