RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 NR2F6P10588 404 aa15.75■□□□□ 0.11
SAMM50-201ENST00000350028 POLR2CP19387 275 aaPredicted RBP15.75■□□□□ 0.11
SAMM50-201ENST00000350028 CBLP22681 906 aa15.75■□□□□ 0.11
SAMM50-201ENST00000350028 CRISP3P54108 245 aa15.75■□□□□ 0.11
SAMM50-201ENST00000350028 PRKAG1P54619 331 aa15.75■□□□□ 0.11
SAMM50-201ENST00000350028 PRR5P85299 388 aa15.75■□□□□ 0.11
SAMM50-201ENST00000350028 EMX1Q04741 257 aaPredicted RBP15.75■□□□□ 0.11
SAMM50-201ENST00000350028 GANABQ14697 944 aaKnown RBP15.75■□□□□ 0.11
SAMM50-201ENST00000350028 SUZ12Q15022 739 aaKnown RBP15.75■□□□□ 0.11
SAMM50-201ENST00000350028 PRAMEF8Q5VWM4 474 aa15.75■□□□□ 0.11
SAMM50-201ENST00000350028 PRAMEF7Q5VXH5 474 aa15.75■□□□□ 0.11
SAMM50-201ENST00000350028 DHRS4L2Q6PKH6 230 aa15.75■□□□□ 0.11
SAMM50-201ENST00000350028 ENTHD1Q8IYW4 607 aa15.75■□□□□ 0.11
SAMM50-201ENST00000350028 KCT2Q8NC54 265 aa15.75■□□□□ 0.11
SAMM50-201ENST00000350028 ZNF540Q8NDQ6 660 aa15.75■□□□□ 0.11
SAMM50-201ENST00000350028 SMIM10Q96HG1 83 aa15.75■□□□□ 0.11
SAMM50-201ENST00000350028 ZNF681Q96N22 645 aa15.75■□□□□ 0.11
SAMM50-201ENST00000350028 OR2A5Q96R48 311 aa15.75■□□□□ 0.11
SAMM50-201ENST00000350028 NIPSNAP1Q9BPW8 284 aa15.75■□□□□ 0.11
SAMM50-201ENST00000350028 PLCXD1Q9NUJ7 323 aa15.75■□□□□ 0.11
SAMM50-201ENST00000350028 PHF11Q9UIL8 331 aa15.75■□□□□ 0.11
SAMM50-201ENST00000350028 TMCC3Q9ULS5 477 aa15.75■□□□□ 0.11
SAMM50-201ENST00000350028 RNF6Q9Y252 685 aa15.75■□□□□ 0.11
SAMM50-201ENST00000350028 FANCMQ8IYD8 2048 aa15.74■□□□□ 0.11
SAMM50-201ENST00000350028 OR6C74A6NCV1 312 aa15.74■□□□□ 0.11
SAMM50-201ENST00000350028 AXIN1O15169 862 aa15.74■□□□□ 0.11
SAMM50-201ENST00000350028 RGS10O43665 173 aa15.74■□□□□ 0.11
SAMM50-201ENST00000350028 PCDHGA12O60330 932 aa15.74■□□□□ 0.11
SAMM50-201ENST00000350028 WBP4O75554 376 aaKnown RBP15.74■□□□□ 0.11
SAMM50-201ENST00000350028 OXSR1O95747 527 aaPredicted RBP15.74■□□□□ 0.11
SAMM50-201ENST00000350028 CCNA2P20248 432 aa15.74■□□□□ 0.11
SAMM50-201ENST00000350028 MAGP20916 626 aa15.74■□□□□ 0.11
SAMM50-201ENST00000350028 NUDT1P36639 197 aa15.74■□□□□ 0.11
SAMM50-201ENST00000350028 FEN1P39748 380 aaKnown RBP15.74■□□□□ 0.11
SAMM50-201ENST00000350028 DGKEP52429 567 aa15.74■□□□□ 0.11
SAMM50-201ENST00000350028 LIM2P55344 173 aa15.74■□□□□ 0.11
SAMM50-201ENST00000350028 MVKQ03426 396 aa15.74■□□□□ 0.11
SAMM50-201ENST00000350028 GPR18Q14330 331 aa15.74■□□□□ 0.11
SAMM50-201ENST00000350028 GPR19Q15760 415 aa15.74■□□□□ 0.11
SAMM50-201ENST00000350028 MLIPQ5VWP3 458 aa15.74■□□□□ 0.11
SAMM50-201ENST00000350028 FCRL6Q6DN72 434 aa15.74■□□□□ 0.11
SAMM50-201ENST00000350028 TRIM73Q86UV7 250 aa15.74■□□□□ 0.11
SAMM50-201ENST00000350028 P3H2Q8IVL5 708 aa15.74■□□□□ 0.11
SAMM50-201ENST00000350028 SAMD14Q8IZD0 417 aaPredicted RBP15.74■□□□□ 0.11
SAMM50-201ENST00000350028 CAMKVQ8NCB2 501 aa15.74■□□□□ 0.11
SAMM50-201ENST00000350028 OR9Q2Q8NGE9 314 aa15.74■□□□□ 0.11
SAMM50-201ENST00000350028 OR5D16Q8NGK9 328 aa15.74■□□□□ 0.11
SAMM50-201ENST00000350028 FAR1Q8WVX9 515 aa15.74■□□□□ 0.11
SAMM50-201ENST00000350028 DHRS1Q96LJ7 313 aa15.74■□□□□ 0.11
SAMM50-201ENST00000350028 SERINC2Q96SA4 455 aa15.74■□□□□ 0.11
SAMM50-201ENST00000350028 GPN2Q9H9Y4 310 aaPredicted RBP15.74■□□□□ 0.11
SAMM50-201ENST00000350028 PRDM9Q9NQV7 894 aa15.74■□□□□ 0.11
SAMM50-201ENST00000350028 RASSF1Q9NS23 344 aa15.74■□□□□ 0.11
SAMM50-201ENST00000350028 AASSQ9UDR5 926 aa15.74■□□□□ 0.11
SAMM50-201ENST00000350028 PCDHGA10Q9Y5H3 936 aa15.74■□□□□ 0.11
SAMM50-201ENST00000350028 KLK4Q9Y5K2 254 aa15.74■□□□□ 0.11
SAMM50-201ENST00000350028 KIR2DS5A0A0G2JLQ3 304 aa15.74■□□□□ 0.11
SAMM50-201ENST00000350028 A0A0G2JNG1 304 aa15.74■□□□□ 0.11
SAMM50-201ENST00000350028 A0A0G2JPF8 293 aa15.74■□□□□ 0.11
SAMM50-201ENST00000350028 GSAPA4D1B5 854 aa15.74■□□□□ 0.11
SAMM50-201ENST00000350028 C2orf74A8MZ97 194 aa15.74■□□□□ 0.11
SAMM50-201ENST00000350028 HNRNPCL2B2RXH8 293 aa15.74■□□□□ 0.11
SAMM50-201ENST00000350028 HNRNPCL3B7ZW38 293 aa15.74■□□□□ 0.11
SAMM50-201ENST00000350028 KIR2DS3K7RE56 304 aa15.74■□□□□ 0.11
SAMM50-201ENST00000350028 FFAR1O14842 300 aa15.74■□□□□ 0.11
SAMM50-201ENST00000350028 NARSO43776 548 aaKnown RBP15.74■□□□□ 0.11
SAMM50-201ENST00000350028 HMGN2P05204 90 aaKnown RBP15.74■□□□□ 0.11
SAMM50-201ENST00000350028 C8orf89P0DMQ9 161 aa15.74■□□□□ 0.11
SAMM50-201ENST00000350028 HNRNPCL4P0DMR1 293 aa15.74■□□□□ 0.11
SAMM50-201ENST00000350028 BUD31P41223 144 aaPredicted RBP15.74■□□□□ 0.11
SAMM50-201ENST00000350028 DUSP2Q05923 314 aa15.74■□□□□ 0.11
SAMM50-201ENST00000350028 KIR2DS5Q14953 304 aa15.74■□□□□ 0.11
SAMM50-201ENST00000350028 ZNF750Q32MQ0 723 aa15.74■□□□□ 0.11
SAMM50-201ENST00000350028 TCTN3Q6NUS6 607 aa15.74■□□□□ 0.11
SAMM50-201ENST00000350028 FAM92BQ6ZTR7 304 aa15.74■□□□□ 0.11
SAMM50-201ENST00000350028 FLCNQ8NFG4 579 aa15.74■□□□□ 0.11
SAMM50-201ENST00000350028 RHOXF1Q8NHV9 184 aa15.74■□□□□ 0.11
SAMM50-201ENST00000350028 APH1BQ8WW43 257 aa15.74■□□□□ 0.11
SAMM50-201ENST00000350028 RORBQ92753 470 aa15.74■□□□□ 0.11
SAMM50-201ENST00000350028 UBE2FQ969M7 185 aa15.74■□□□□ 0.11
SAMM50-201ENST00000350028 ELP4Q96EB1 424 aa15.74■□□□□ 0.11
SAMM50-201ENST00000350028 FCRL4Q96PJ5 515 aa15.74■□□□□ 0.11
SAMM50-201ENST00000350028 BTBD2Q9BX70 525 aa15.74■□□□□ 0.11
SAMM50-201ENST00000350028 CPNE7Q9UBL6 633 aa15.74■□□□□ 0.11
SAMM50-201ENST00000350028 WARS2Q9UGM6 360 aaKnown RBP15.74■□□□□ 0.11
SAMM50-201ENST00000350028 PILRAQ9UKJ1 303 aa15.74■□□□□ 0.11
SAMM50-201ENST00000350028 NDRG2Q9UN36 371 aaKnown RBP15.74■□□□□ 0.11
SAMM50-201ENST00000350028 ASNA1O43681 348 aa15.73■□□□□ 0.11
SAMM50-201ENST00000350028 H1F0P07305 194 aaKnown RBP15.73■□□□□ 0.11
SAMM50-201ENST00000350028 ZNF10P21506 573 aaPredicted RBP15.73■□□□□ 0.11
SAMM50-201ENST00000350028 CPN2P22792 545 aa15.73■□□□□ 0.11
SAMM50-201ENST00000350028 KRT20P35900 424 aa15.73■□□□□ 0.11
SAMM50-201ENST00000350028 UBE2IP63279 158 aaKnown RBP15.73■□□□□ 0.11
SAMM50-201ENST00000350028 TNFRSF17Q02223 184 aa15.73■□□□□ 0.11
SAMM50-201ENST00000350028 LASP1Q14847 261 aaKnown RBP15.73■□□□□ 0.11
SAMM50-201ENST00000350028 CCDC85BQ15834 202 aaPredicted RBP15.73■□□□□ 0.11
SAMM50-201ENST00000350028 SMN1Q16637 294 aaKnown RBP15.73■□□□□ 0.11
SAMM50-201ENST00000350028 ZNF770Q6IQ21 691 aaPredicted RBP15.73■□□□□ 0.11
SAMM50-201ENST00000350028 TMEM107Q6UX40 140 aa15.73■□□□□ 0.11
SAMM50-201ENST00000350028 PRSS48Q7RTY5 328 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms