RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 C17orf64Q86WR6 236 aa17.12■□□□□ 0.33
PTP4A3-202ENST00000349124 KRT78Q8N1N4 520 aa17.12■□□□□ 0.33
PTP4A3-202ENST00000349124 SYT14Q8NB59 555 aa17.12■□□□□ 0.33
PTP4A3-202ENST00000349124 LRR1Q96L50 414 aa17.12■□□□□ 0.33
PTP4A3-202ENST00000349124 MS4A8Q9BY19 250 aa17.12■□□□□ 0.33
PTP4A3-202ENST00000349124 OR51I1Q9H343 314 aa17.12■□□□□ 0.33
PTP4A3-202ENST00000349124 ANKRA2Q9H9E1 313 aa17.12■□□□□ 0.33
PTP4A3-202ENST00000349124 DYRK4Q9NR20 520 aa17.12■□□□□ 0.33
PTP4A3-202ENST00000349124 CRNNQ9UBG3 495 aaPredicted RBP17.12■□□□□ 0.33
PTP4A3-202ENST00000349124 RANBP2P49792 3224 aaKnown RBP17.12■□□□□ 0.33
PTP4A3-202ENST00000349124 ABHD14A-ACY1A0A1B0GW23 586 aa17.12■□□□□ 0.33
PTP4A3-202ENST00000349124 OTOL1A6NHN0 477 aaPredicted RBP17.12■□□□□ 0.33
PTP4A3-202ENST00000349124 LATO43561 262 aa17.12■□□□□ 0.33
PTP4A3-202ENST00000349124 LINC00271P0C7V0 271 aa17.12■□□□□ 0.33
PTP4A3-202ENST00000349124 TIE1P35590 1138 aa17.12■□□□□ 0.33
PTP4A3-202ENST00000349124 MAPK9P45984 424 aa17.12■□□□□ 0.33
PTP4A3-202ENST00000349124 RORCP51449 518 aa17.12■□□□□ 0.33
PTP4A3-202ENST00000349124 GPR19Q15760 415 aa17.12■□□□□ 0.33
PTP4A3-202ENST00000349124 CCDC92Q53HC0 331 aaPredicted RBP17.12■□□□□ 0.33
PTP4A3-202ENST00000349124 TOR1AIP1Q5JTV8 583 aa17.12■□□□□ 0.33
PTP4A3-202ENST00000349124 ATAT1Q5SQI0 421 aa17.12■□□□□ 0.33
PTP4A3-202ENST00000349124 MFSD4BQ5TF39 518 aa17.12■□□□□ 0.33
PTP4A3-202ENST00000349124 UBQLNLQ8IYU4 475 aa17.12■□□□□ 0.33
PTP4A3-202ENST00000349124 OR6T1Q8NGN1 323 aa17.12■□□□□ 0.33
PTP4A3-202ENST00000349124 OR8J1Q8NGP2 316 aa17.12■□□□□ 0.33
PTP4A3-202ENST00000349124 RAD51AP1Q96B01 352 aa17.12■□□□□ 0.33
PTP4A3-202ENST00000349124 ENOPH1Q9UHY7 261 aa17.12■□□□□ 0.33
PTP4A3-202ENST00000349124 A0A1W2PQ09 198 aa17.11■□□□□ 0.33
PTP4A3-202ENST00000349124 EPHX1P07099 455 aa17.11■□□□□ 0.33
PTP4A3-202ENST00000349124 MNX1P50219 401 aaPredicted RBP17.11■□□□□ 0.33
PTP4A3-202ENST00000349124 MAP4K2Q12851 820 aa17.11■□□□□ 0.33
PTP4A3-202ENST00000349124 DEFB115Q30KQ5 88 aa17.11■□□□□ 0.33
PTP4A3-202ENST00000349124 ATAD3CQ5T2N8 411 aa17.11■□□□□ 0.33
PTP4A3-202ENST00000349124 IQCHQ86VS3 1027 aa17.11■□□□□ 0.33
PTP4A3-202ENST00000349124 ZFP41Q8N8Y5 198 aa17.11■□□□□ 0.33
PTP4A3-202ENST00000349124 OR52I1Q8NGK6 324 aa17.11■□□□□ 0.33
PTP4A3-202ENST00000349124 SETD7Q8WTS6 366 aaKnown RBP17.11■□□□□ 0.33
PTP4A3-202ENST00000349124 HHIPL1Q96JK4 782 aa17.11■□□□□ 0.33
PTP4A3-202ENST00000349124 FUZQ9BT04 418 aa17.11■□□□□ 0.33
PTP4A3-202ENST00000349124 PLA2G12AQ9BZM1 189 aa17.11■□□□□ 0.33
PTP4A3-202ENST00000349124 RPL36Q9Y3U8 105 aaKnown RBP17.11■□□□□ 0.33
PTP4A3-202ENST00000349124 FAAHO00519 579 aa17.11■□□□□ 0.33
PTP4A3-202ENST00000349124 FRS3O43559 492 aa17.11■□□□□ 0.33
PTP4A3-202ENST00000349124 OR1F1O43749 312 aa17.11■□□□□ 0.33
PTP4A3-202ENST00000349124 MSL3P1P0C860 447 aa17.11■□□□□ 0.33
PTP4A3-202ENST00000349124 PTPN2P17706 415 aa17.11■□□□□ 0.33
PTP4A3-202ENST00000349124 PPM1AP35813 382 aa17.11■□□□□ 0.33
PTP4A3-202ENST00000349124 CD79BP40259 229 aa17.11■□□□□ 0.33
PTP4A3-202ENST00000349124 VIPR2P41587 438 aa17.11■□□□□ 0.33
PTP4A3-202ENST00000349124 GSTM5P46439 218 aa17.11■□□□□ 0.33
PTP4A3-202ENST00000349124 ST8SIA6P61647 398 aa17.11■□□□□ 0.33
PTP4A3-202ENST00000349124 DBPQ10586 325 aaPredicted RBP17.11■□□□□ 0.33
PTP4A3-202ENST00000349124 SYT14P1Q58G82 188 aa17.11■□□□□ 0.33
PTP4A3-202ENST00000349124 ARMC4Q5T2S8 1044 aa17.11■□□□□ 0.33
PTP4A3-202ENST00000349124 C9orf64Q5T6V5 341 aa17.11■□□□□ 0.33
PTP4A3-202ENST00000349124 SPRED2Q7Z698 418 aa17.11■□□□□ 0.33
PTP4A3-202ENST00000349124 UBE2E3Q969T4 207 aa17.11■□□□□ 0.33
PTP4A3-202ENST00000349124 TM9SF2Q99805 663 aa17.11■□□□□ 0.33
PTP4A3-202ENST00000349124 EGLN3Q9H6Z9 239 aa17.11■□□□□ 0.33
PTP4A3-202ENST00000349124 PAK6Q9NQU5 681 aaPredicted RBP17.11■□□□□ 0.33
PTP4A3-202ENST00000349124 MAN2C1Q9NTJ4 1040 aa17.11■□□□□ 0.33
PTP4A3-202ENST00000349124 AHSPQ9NZD4 102 aa17.11■□□□□ 0.33
PTP4A3-202ENST00000349124 STUB1Q9UNE7 303 aa17.11■□□□□ 0.33
PTP4A3-202ENST00000349124 ZNF670-ZNF695F2Z2N8 137 aa17.1■□□□□ 0.33
PTP4A3-202ENST00000349124 NR2F1P10589 423 aa17.1■□□□□ 0.33
PTP4A3-202ENST00000349124 IL7P13232 177 aa17.1■□□□□ 0.33
PTP4A3-202ENST00000349124 GIPRP48546 466 aa17.1■□□□□ 0.33
PTP4A3-202ENST00000349124 MLLT1Q03111 559 aaPredicted RBP17.1■□□□□ 0.33
PTP4A3-202ENST00000349124 LARS2Q15031 903 aaKnown RBP17.1■□□□□ 0.33
PTP4A3-202ENST00000349124 TMEM201Q5SNT2 666 aa17.1■□□□□ 0.33
PTP4A3-202ENST00000349124 LCTLQ6UWM7 567 aa17.1■□□□□ 0.33
PTP4A3-202ENST00000349124 OR4K5Q8NGD3 323 aa17.1■□□□□ 0.33
PTP4A3-202ENST00000349124 GATAD2BQ8WXI9 593 aa17.1■□□□□ 0.33
PTP4A3-202ENST00000349124 TM9SF4Q92544 642 aa17.1■□□□□ 0.33
PTP4A3-202ENST00000349124 ZG16BQ96DA0 208 aa17.1■□□□□ 0.33
PTP4A3-202ENST00000349124 TEFMQ96QE5 360 aaKnown RBP17.1■□□□□ 0.33
PTP4A3-202ENST00000349124 MND1Q9BWT6 205 aa17.1■□□□□ 0.33
PTP4A3-202ENST00000349124 ZCCHC2Q9C0B9 1178 aaKnown RBP17.1■□□□□ 0.33
PTP4A3-202ENST00000349124 MIXL1Q9H2W2 232 aa17.1■□□□□ 0.33
PTP4A3-202ENST00000349124 XKR8Q9H6D3 395 aa17.1■□□□□ 0.33
PTP4A3-202ENST00000349124 C3orf14Q9HBI5 128 aa17.1■□□□□ 0.33
PTP4A3-202ENST00000349124 TXNL4BQ9NX01 149 aaKnown RBP17.1■□□□□ 0.33
PTP4A3-202ENST00000349124 TBC1D14Q9P2M4 693 aa17.1■□□□□ 0.33
PTP4A3-202ENST00000349124 SEC14L4Q9UDX3 406 aa17.1■□□□□ 0.33
PTP4A3-202ENST00000349124 KCNE3Q9Y6H6 103 aa17.1■□□□□ 0.33
PTP4A3-202ENST00000349124 KIAA1671Q9BY89 1806 aa17.1■□□□□ 0.33
PTP4A3-202ENST00000349124 KRT8P05787 483 aa17.1■□□□□ 0.33
PTP4A3-202ENST00000349124 HOXB3P14651 431 aaPredicted RBP17.1■□□□□ 0.33
PTP4A3-202ENST00000349124 RACK1P63244 317 aaKnown RBP17.1■□□□□ 0.33
PTP4A3-202ENST00000349124 PSPHP78330 225 aa17.1■□□□□ 0.33
PTP4A3-202ENST00000349124 HNRNPA0Q13151 305 aaKnown RBP17.1■□□□□ 0.33
PTP4A3-202ENST00000349124 GPR50Q13585 617 aa17.1■□□□□ 0.33
PTP4A3-202ENST00000349124 ADCK2Q7Z695 626 aa17.1■□□□□ 0.33
PTP4A3-202ENST00000349124 TP53I13Q8NBR0 393 aaPredicted RBP17.1■□□□□ 0.33
PTP4A3-202ENST00000349124 FLCNQ8NFG4 579 aa17.1■□□□□ 0.33
PTP4A3-202ENST00000349124 TP53INP1Q96A56 240 aa17.1■□□□□ 0.33
PTP4A3-202ENST00000349124 RSPRY1Q96DX4 576 aa17.1■□□□□ 0.33
PTP4A3-202ENST00000349124 CCDC32Q9BV29 185 aa17.1■□□□□ 0.33
PTP4A3-202ENST00000349124 AICDAQ9GZX7 198 aa17.1■□□□□ 0.33
PTP4A3-202ENST00000349124 DPEP2Q9H4A9 486 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms