RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 SNPHO15079 494 aa13.15□□□□□ -0.3
TRIM4-201ENST00000349062 PCDHGA12O60330 932 aa13.15□□□□□ -0.3
TRIM4-201ENST00000349062 B4GALT2O60909 372 aa13.15□□□□□ -0.3
TRIM4-201ENST00000349062 ALOX12P18054 663 aa13.15□□□□□ -0.3
TRIM4-201ENST00000349062 PCGF2P35227 344 aa13.15□□□□□ -0.3
TRIM4-201ENST00000349062 TPMTP51580 245 aa13.15□□□□□ -0.3
TRIM4-201ENST00000349062 PPP1CAP62136 330 aa13.15□□□□□ -0.3
TRIM4-201ENST00000349062 MLLT1Q03111 559 aaPredicted RBP13.15□□□□□ -0.3
TRIM4-201ENST00000349062 ZNF691Q5VV52 312 aa13.15□□□□□ -0.3
TRIM4-201ENST00000349062 ZNF438Q7Z4V0 828 aa13.15□□□□□ -0.3
TRIM4-201ENST00000349062 OR2L3Q8NG85 312 aa13.15□□□□□ -0.3
TRIM4-201ENST00000349062 C7orf34Q96L11 122 aa13.15□□□□□ -0.3
TRIM4-201ENST00000349062 GLIPR2Q9H4G4 154 aa13.15□□□□□ -0.3
TRIM4-201ENST00000349062 PALMDQ9NP74 551 aa13.15□□□□□ -0.3
TRIM4-201ENST00000349062 IL20RAQ9UHF4 553 aa13.15□□□□□ -0.3
TRIM4-201ENST00000349062 CORO2BQ9UQ03 480 aa13.15□□□□□ -0.3
TRIM4-201ENST00000349062 ENTPD4Q9Y227 616 aa13.15□□□□□ -0.3
TRIM4-201ENST00000349062 LYVE1Q9Y5Y7 322 aa13.15□□□□□ -0.3
TRIM4-201ENST00000349062 KCNE3Q9Y6H6 103 aa13.15□□□□□ -0.3
TRIM4-201ENST00000349062 UNC13CQ8NB66 2214 aa13.15□□□□□ -0.3
TRIM4-201ENST00000349062 LRIT2A6NDA9 550 aa13.15□□□□□ -0.3
TRIM4-201ENST00000349062 TRIM64CA6NLI5 447 aa13.15□□□□□ -0.3
TRIM4-201ENST00000349062 ZNF99A8MXY4 864 aaPredicted RBP13.15□□□□□ -0.3
TRIM4-201ENST00000349062 TNFRSF21O75509 655 aa13.15□□□□□ -0.3
TRIM4-201ENST00000349062 TRIM23P36406 574 aa13.15□□□□□ -0.3
TRIM4-201ENST00000349062 MC3RP41968 323 aa13.15□□□□□ -0.3
TRIM4-201ENST00000349062 ALDH6A1Q02252 535 aaKnown RBP13.15□□□□□ -0.3
TRIM4-201ENST00000349062 LAIR2Q6ISS4 152 aa13.15□□□□□ -0.3
TRIM4-201ENST00000349062 REEP3Q6NUK4 255 aa13.15□□□□□ -0.3
TRIM4-201ENST00000349062 TAF8Q7Z7C8 310 aa13.15□□□□□ -0.3
TRIM4-201ENST00000349062 ANKRD13BQ86YJ7 626 aa13.15□□□□□ -0.3
TRIM4-201ENST00000349062 METTL27Q8N6F8 245 aaPredicted RBP13.15□□□□□ -0.3
TRIM4-201ENST00000349062 ZBED6CLQ96FA7 236 aaPredicted RBP13.15□□□□□ -0.3
TRIM4-201ENST00000349062 SLC35G5Q96KT7 338 aa13.15□□□□□ -0.3
TRIM4-201ENST00000349062 TUBA1CQ9BQE3 449 aa13.15□□□□□ -0.3
TRIM4-201ENST00000349062 GPR174Q9BXC1 333 aa13.15□□□□□ -0.3
TRIM4-201ENST00000349062 C2orf42Q9NWW7 574 aa13.15□□□□□ -0.3
TRIM4-201ENST00000349062 SLCO1B1Q9Y6L6 691 aa13.15□□□□□ -0.3
TRIM4-201ENST00000349062 SPAG17Q6Q759 2223 aa13.15□□□□□ -0.3
TRIM4-201ENST00000349062 ZDBF2Q9HCK1 2354 aa13.15□□□□□ -0.3
TRIM4-201ENST00000349062 TRBV4-1A0A0J9YWV2 114 aa13.15□□□□□ -0.3
TRIM4-201ENST00000349062 A0A1W2PR48 441 aa13.15□□□□□ -0.3
TRIM4-201ENST00000349062 ZNF888P0CJ79 500 aaPredicted RBP13.15□□□□□ -0.3
TRIM4-201ENST00000349062 NTSP30990 170 aa13.15□□□□□ -0.3
TRIM4-201ENST00000349062 KRT20P35900 424 aa13.15□□□□□ -0.3
TRIM4-201ENST00000349062 SERPINB10P48595 397 aa13.15□□□□□ -0.3
TRIM4-201ENST00000349062 EMX1Q04741 257 aaPredicted RBP13.15□□□□□ -0.3
TRIM4-201ENST00000349062 MADCAM1Q13477 382 aa13.15□□□□□ -0.3
TRIM4-201ENST00000349062 ADPRMQ3LIE5 342 aa13.15□□□□□ -0.3
TRIM4-201ENST00000349062 C6orf132Q5T0Z8 1188 aa13.15□□□□□ -0.3
TRIM4-201ENST00000349062 RSBN1Q5VWQ0 802 aaPredicted RBP13.15□□□□□ -0.3
TRIM4-201ENST00000349062 Q6ZSR6 202 aa13.15□□□□□ -0.3
TRIM4-201ENST00000349062 ARMC8Q8IUR7 673 aa13.15□□□□□ -0.3
TRIM4-201ENST00000349062 IQCF1Q8N6M8 205 aa13.15□□□□□ -0.3
TRIM4-201ENST00000349062 ZG16BQ96DA0 208 aa13.15□□□□□ -0.3
TRIM4-201ENST00000349062 FCRL1Q96LA6 429 aa13.15□□□□□ -0.3
TRIM4-201ENST00000349062 ZNF300Q96RE9 604 aaPredicted RBP13.15□□□□□ -0.3
TRIM4-201ENST00000349062 MAPKAP1Q9BPZ7 522 aa13.15□□□□□ -0.3
TRIM4-201ENST00000349062 ZNF717Q9BY31 904 aaPredicted RBP13.15□□□□□ -0.3
TRIM4-201ENST00000349062 WDR12Q9GZL7 423 aaKnown RBP13.15□□□□□ -0.3
TRIM4-201ENST00000349062 AICDAQ9GZX7 198 aa13.15□□□□□ -0.3
TRIM4-201ENST00000349062 GPR83Q9NYM4 423 aa13.15□□□□□ -0.3
TRIM4-201ENST00000349062 HMGN2P05204 90 aaKnown RBP13.14□□□□□ -0.31
TRIM4-201ENST00000349062 UQCRC2P22695 453 aa13.14□□□□□ -0.31
TRIM4-201ENST00000349062 AVPR1BP47901 424 aa13.14□□□□□ -0.31
TRIM4-201ENST00000349062 COPZ1P61923 177 aa13.14□□□□□ -0.31
TRIM4-201ENST00000349062 VEZF1Q14119 521 aa13.14□□□□□ -0.31
TRIM4-201ENST00000349062 THOC7Q6I9Y2 204 aaKnown RBP13.14□□□□□ -0.31
TRIM4-201ENST00000349062 ZC3H14Q6PJT7 736 aaKnown RBP13.14□□□□□ -0.31
TRIM4-201ENST00000349062 RNF165Q6ZSG1 346 aa13.14□□□□□ -0.31
TRIM4-201ENST00000349062 LACC1Q8IV20 430 aa13.14□□□□□ -0.31
TRIM4-201ENST00000349062 FBXO15Q8NCQ5 510 aaPredicted RBP13.14□□□□□ -0.31
TRIM4-201ENST00000349062 MROQ9BYG7 248 aa13.14□□□□□ -0.31
TRIM4-201ENST00000349062 A8MV72 311 aaPredicted RBP13.14□□□□□ -0.31
TRIM4-201ENST00000349062 B4DGG1 531 aa13.14□□□□□ -0.31
TRIM4-201ENST00000349062 LDB3O75112 727 aa13.14□□□□□ -0.31
TRIM4-201ENST00000349062 UGT2B11O75310 529 aa13.14□□□□□ -0.31
TRIM4-201ENST00000349062 JRKO75564 520 aa13.14□□□□□ -0.31
TRIM4-201ENST00000349062 CPNE6O95741 557 aa13.14□□□□□ -0.31
TRIM4-201ENST00000349062 GSTM2P28161 218 aa13.14□□□□□ -0.31
TRIM4-201ENST00000349062 CMPK1P30085 196 aa13.14□□□□□ -0.31
TRIM4-201ENST00000349062 ITGA1P56199 1179 aa13.14□□□□□ -0.31
TRIM4-201ENST00000349062 TSEN54Q7Z6J9 526 aaKnown RBP13.14□□□□□ -0.31
TRIM4-201ENST00000349062 GATAD2AQ86YP4 633 aa13.14□□□□□ -0.31
TRIM4-201ENST00000349062 CCDC71Q8IV32 467 aaPredicted RBP13.14□□□□□ -0.31
TRIM4-201ENST00000349062 MCFD2Q8NI22 146 aa13.14□□□□□ -0.31
TRIM4-201ENST00000349062 SLC35C2Q9NQQ7 365 aa13.14□□□□□ -0.31
TRIM4-201ENST00000349062 ZNF624Q9P2J8 865 aaPredicted RBP13.14□□□□□ -0.31
TRIM4-201ENST00000349062 APOBEC3BQ9UH17 382 aaKnown RBP13.14□□□□□ -0.31
TRIM4-201ENST00000349062 MKLN1Q9UL63 735 aa13.14□□□□□ -0.31
TRIM4-201ENST00000349062 COL4A3Q01955 1670 aa13.14□□□□□ -0.31
TRIM4-201ENST00000349062 LRRC72A6NJI9 287 aa13.14□□□□□ -0.31
TRIM4-201ENST00000349062 AIFM1O95831 613 aa13.14□□□□□ -0.31
TRIM4-201ENST00000349062 CTSEP14091 401 aa13.14□□□□□ -0.31
TRIM4-201ENST00000349062 PEBP1P30086 187 aaKnown RBP13.14□□□□□ -0.31
TRIM4-201ENST00000349062 RPL3P39023 403 aaKnown RBP13.14□□□□□ -0.31
TRIM4-201ENST00000349062 GP2P55259 537 aaKnown RBP13.14□□□□□ -0.31
TRIM4-201ENST00000349062 REEP5Q00765 189 aa13.14□□□□□ -0.31
TRIM4-201ENST00000349062 CCNJQ5T5M9 372 aa13.14□□□□□ -0.31
TRIM4-201ENST00000349062 IRAK1BP1Q5VVH5 260 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms