RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 UCN3Q969E3 161 aa17.7■□□□□ 0.42
SCARF1-202ENST00000348987 SENP5Q96HI0 755 aaPredicted RBP17.7■□□□□ 0.42
SCARF1-202ENST00000348987 MED18Q9BUE0 208 aa17.7■□□□□ 0.42
SCARF1-202ENST00000348987 FAM8A1Q9UBU6 413 aa17.7■□□□□ 0.42
SCARF1-202ENST00000348987 SLC22A14Q9Y267 594 aa17.7■□□□□ 0.42
SCARF1-202ENST00000348987 GSTM5P46439 218 aa17.69■□□□□ 0.42
SCARF1-202ENST00000348987 MVDP53602 400 aa17.69■□□□□ 0.42
SCARF1-202ENST00000348987 EPHA5P54756 1037 aa17.69■□□□□ 0.42
SCARF1-202ENST00000348987 RIN1Q13671 783 aa17.69■□□□□ 0.42
SCARF1-202ENST00000348987 PLK5Q496M5 336 aa17.69■□□□□ 0.42
SCARF1-202ENST00000348987 ZNF770Q6IQ21 691 aaPredicted RBP17.69■□□□□ 0.42
SCARF1-202ENST00000348987 METTL2BQ6P1Q9 378 aaKnown RBP17.69■□□□□ 0.42
SCARF1-202ENST00000348987 TMEM81Q6P7N7 255 aa17.69■□□□□ 0.42
SCARF1-202ENST00000348987 Q6ZNB5 142 aa17.69■□□□□ 0.42
SCARF1-202ENST00000348987 ASB18Q6ZVZ8 466 aa17.69■□□□□ 0.42
SCARF1-202ENST00000348987 UBE2R2Q712K3 238 aaPredicted RBP17.69■□□□□ 0.42
SCARF1-202ENST00000348987 GPAT4Q86UL3 456 aa17.69■□□□□ 0.42
SCARF1-202ENST00000348987 NPAS3Q8IXF0 933 aa17.69■□□□□ 0.42
SCARF1-202ENST00000348987 OR4A15Q8NGL6 344 aa17.69■□□□□ 0.42
SCARF1-202ENST00000348987 HHIPL1Q96JK4 782 aa17.69■□□□□ 0.42
SCARF1-202ENST00000348987 PKP4Q99569 1192 aa17.69■□□□□ 0.42
SCARF1-202ENST00000348987 ATG10Q9H0Y0 220 aa17.69■□□□□ 0.42
SCARF1-202ENST00000348987 PPA2Q9H2U2 334 aa17.69■□□□□ 0.42
SCARF1-202ENST00000348987 CDCP1Q9H5V8 836 aa17.69■□□□□ 0.42
SCARF1-202ENST00000348987 FOLH1BQ9HBA9 442 aa17.69■□□□□ 0.42
SCARF1-202ENST00000348987 REV1Q9UBZ9 1251 aa17.69■□□□□ 0.42
SCARF1-202ENST00000348987 CORO2BQ9UQ03 480 aa17.69■□□□□ 0.42
SCARF1-202ENST00000348987 MYO7AQ13402 2215 aa17.69■□□□□ 0.42
SCARF1-202ENST00000348987 DSPPQ9NZW4 1301 aa17.69■□□□□ 0.42
SCARF1-202ENST00000348987 MPC2O95563 127 aa17.69■□□□□ 0.42
SCARF1-202ENST00000348987 NNMTP40261 264 aa17.69■□□□□ 0.42
SCARF1-202ENST00000348987 MAP2K6P52564 334 aa17.69■□□□□ 0.42
SCARF1-202ENST00000348987 FABP5Q01469 135 aa17.69■□□□□ 0.42
SCARF1-202ENST00000348987 PTSQ03393 145 aa17.69■□□□□ 0.42
SCARF1-202ENST00000348987 IKZF1Q13422 519 aa17.69■□□□□ 0.42
SCARF1-202ENST00000348987 ZMYND11Q15326 602 aa17.69■□□□□ 0.42
SCARF1-202ENST00000348987 COL28A1Q2UY09 1125 aa17.69■□□□□ 0.42
SCARF1-202ENST00000348987 CLLU1Q5K131 121 aa17.69■□□□□ 0.42
SCARF1-202ENST00000348987 TMEM107Q6UX40 140 aa17.69■□□□□ 0.42
SCARF1-202ENST00000348987 C1orf52Q8N6N3 182 aaKnown RBP17.69■□□□□ 0.42
SCARF1-202ENST00000348987 OR52I1Q8NGK6 324 aa17.69■□□□□ 0.42
SCARF1-202ENST00000348987 CEP76Q8TAP6 659 aa17.69■□□□□ 0.42
SCARF1-202ENST00000348987 GATAD2BQ8WXI9 593 aa17.69■□□□□ 0.42
SCARF1-202ENST00000348987 HDHD2Q9H0R4 259 aa17.69■□□□□ 0.42
SCARF1-202ENST00000348987 CHD7Q9P2D1 2997 aa17.69■□□□□ 0.42
SCARF1-202ENST00000348987 TRAV6A0A075B6T7 132 aa17.68■□□□□ 0.42
SCARF1-202ENST00000348987 SGK494L7N484 410 aa17.68■□□□□ 0.42
SCARF1-202ENST00000348987 SCAMP2O15127 329 aaKnown RBP17.68■□□□□ 0.42
SCARF1-202ENST00000348987 PRMT3O60678 531 aa17.68■□□□□ 0.42
SCARF1-202ENST00000348987 RRASP10301 218 aa17.68■□□□□ 0.42
SCARF1-202ENST00000348987 NSG1P42857 185 aa17.68■□□□□ 0.42
SCARF1-202ENST00000348987 SRP54P61011 504 aaKnown RBP17.68■□□□□ 0.42
SCARF1-202ENST00000348987 GPR176Q14439 515 aa17.68■□□□□ 0.42
SCARF1-202ENST00000348987 GGTA1PQ4G0N0 100 aa17.68■□□□□ 0.42
SCARF1-202ENST00000348987 BICRALQ6AI39 1079 aa17.68■□□□□ 0.42
SCARF1-202ENST00000348987 LIPIQ6XZB0 460 aa17.68■□□□□ 0.42
SCARF1-202ENST00000348987 TRILQ7L0X0 811 aa17.68■□□□□ 0.42
SCARF1-202ENST00000348987 ZFP41Q8N8Y5 198 aa17.68■□□□□ 0.42
SCARF1-202ENST00000348987 VPS37AQ8NEZ2 397 aa17.68■□□□□ 0.42
SCARF1-202ENST00000348987 PXYLP1Q8TE99 480 aa17.68■□□□□ 0.42
SCARF1-202ENST00000348987 ZNF296Q8WUU4 475 aaPredicted RBP17.68■□□□□ 0.42
SCARF1-202ENST00000348987 GEMIN6Q8WXD5 167 aaKnown RBP17.68■□□□□ 0.42
SCARF1-202ENST00000348987 MYLIPQ8WY64 445 aa17.68■□□□□ 0.42
SCARF1-202ENST00000348987 ASIC4Q96FT7 647 aa17.68■□□□□ 0.42
SCARF1-202ENST00000348987 TRMT2BQ96GJ1 504 aaKnown RBP17.68■□□□□ 0.42
SCARF1-202ENST00000348987 ATF6BQ99941 703 aa17.68■□□□□ 0.42
SCARF1-202ENST00000348987 P2RY13Q9BPV8 354 aa17.68■□□□□ 0.42
SCARF1-202ENST00000348987 C1QTNF6Q9BXI9 259 aa17.68■□□□□ 0.42
SCARF1-202ENST00000348987 SLCO1C1Q9NYB5 712 aa17.68■□□□□ 0.42
SCARF1-202ENST00000348987 AP1M2Q9Y6Q5 423 aa17.68■□□□□ 0.42
SCARF1-202ENST00000348987 AGAP14A8MT82 685 aa17.68■□□□□ 0.42
SCARF1-202ENST00000348987 TOR1AO14656 332 aa17.68■□□□□ 0.42
SCARF1-202ENST00000348987 PAHP00439 452 aa17.68■□□□□ 0.42
SCARF1-202ENST00000348987 OSMP13725 252 aa17.68■□□□□ 0.42
SCARF1-202ENST00000348987 CXCL3P19876 107 aa17.68■□□□□ 0.42
SCARF1-202ENST00000348987 PPIBP23284 216 aaKnown RBP17.68■□□□□ 0.42
SCARF1-202ENST00000348987 ZNF81P51508 661 aa17.68■□□□□ 0.42
SCARF1-202ENST00000348987 PTPN5P54829 565 aa17.68■□□□□ 0.42
SCARF1-202ENST00000348987 GPR33Q49SQ1 333 aa17.68■□□□□ 0.42
SCARF1-202ENST00000348987 TMEM201Q5SNT2 666 aa17.68■□□□□ 0.42
SCARF1-202ENST00000348987 OTOP2Q7RTS6 562 aa17.68■□□□□ 0.42
SCARF1-202ENST00000348987 LSM14AQ8ND56 463 aaKnown RBP17.68■□□□□ 0.42
SCARF1-202ENST00000348987 HUS1BQ8NHY5 278 aa17.68■□□□□ 0.42
SCARF1-202ENST00000348987 KCTD5Q9NXV2 234 aa17.68■□□□□ 0.42
SCARF1-202ENST00000348987 MRPL39Q9NYK5 338 aaKnown RBP17.68■□□□□ 0.42
SCARF1-202ENST00000348987 HCN2Q9UL51 889 aa17.68■□□□□ 0.42
SCARF1-202ENST00000348987 ENPP4Q9Y6X5 453 aa17.68■□□□□ 0.42
SCARF1-202ENST00000348987 SLC30A4O14863 429 aa17.68■□□□□ 0.42
SCARF1-202ENST00000348987 TLX2O43763 284 aaPredicted RBP17.68■□□□□ 0.42
SCARF1-202ENST00000348987 CFDP00746 253 aaPredicted RBP17.68■□□□□ 0.42
SCARF1-202ENST00000348987 TP53P04637 393 aaPredicted RBP17.68■□□□□ 0.42
SCARF1-202ENST00000348987 SYPP08247 313 aa17.68■□□□□ 0.42
SCARF1-202ENST00000348987 GJA1P17302 382 aa17.68■□□□□ 0.42
SCARF1-202ENST00000348987 HK1P19367 917 aa17.68■□□□□ 0.42
SCARF1-202ENST00000348987 SLC6A1P30531 599 aa17.68■□□□□ 0.42
SCARF1-202ENST00000348987 IRS1P35568 1242 aa17.68■□□□□ 0.42
SCARF1-202ENST00000348987 BDKRB1P46663 353 aa17.68■□□□□ 0.42
SCARF1-202ENST00000348987 HEPACAMQ14CZ8 416 aa17.68■□□□□ 0.42
SCARF1-202ENST00000348987 STK11Q15831 433 aa17.68■□□□□ 0.42
SCARF1-202ENST00000348987 LGALSLQ3ZCW2 172 aaPredicted RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms