RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 MGAT3Q09327 533 aa11.58□□□□□ -0.56
COL12A1-202ENST00000345356 MS4A15Q8N5U1 240 aa11.58□□□□□ -0.56
COL12A1-202ENST00000345356 STK35Q8TDR2 534 aa11.58□□□□□ -0.56
COL12A1-202ENST00000345356 CDCA5Q96FF9 252 aa11.58□□□□□ -0.56
COL12A1-202ENST00000345356 C3orf30Q96M34 536 aa11.58□□□□□ -0.56
COL12A1-202ENST00000345356 C11orf54Q9H0W9 315 aaPredicted RBP11.58□□□□□ -0.56
COL12A1-202ENST00000345356 TAS2R8Q9NYW2 309 aa11.58□□□□□ -0.56
COL12A1-202ENST00000345356 KLHL21Q9UJP4 597 aa11.58□□□□□ -0.56
COL12A1-202ENST00000345356 AFDNP55196 1824 aaKnown RBP11.58□□□□□ -0.56
COL12A1-202ENST00000345356 SSX4O60224 188 aa11.58□□□□□ -0.56
COL12A1-202ENST00000345356 IL1AP01583 271 aa11.58□□□□□ -0.56
COL12A1-202ENST00000345356 CTSEP14091 401 aa11.58□□□□□ -0.56
COL12A1-202ENST00000345356 AKR1C4P17516 323 aa11.58□□□□□ -0.56
COL12A1-202ENST00000345356 POLR2IP36954 125 aaKnown RBP11.58□□□□□ -0.56
COL12A1-202ENST00000345356 LSSP48449 732 aa11.58□□□□□ -0.56
COL12A1-202ENST00000345356 RAB5CP51148 216 aa11.58□□□□□ -0.56
COL12A1-202ENST00000345356 BTG3Q14201 252 aaPredicted RBP11.58□□□□□ -0.56
COL12A1-202ENST00000345356 INAVAQ3KP66 663 aa11.58□□□□□ -0.56
COL12A1-202ENST00000345356 CES4AQ5XG92 561 aa11.58□□□□□ -0.56
COL12A1-202ENST00000345356 GLT8D1Q68CQ7 371 aa11.58□□□□□ -0.56
COL12A1-202ENST00000345356 MAVSQ7Z434 540 aa11.58□□□□□ -0.56
COL12A1-202ENST00000345356 KCTD20Q7Z5Y7 419 aa11.58□□□□□ -0.56
COL12A1-202ENST00000345356 HMGN2P46Q86SG4 172 aa11.58□□□□□ -0.56
COL12A1-202ENST00000345356 SLC22A15Q8IZD6 547 aa11.58□□□□□ -0.56
COL12A1-202ENST00000345356 ZNF454Q8N9F8 522 aa11.58□□□□□ -0.56
COL12A1-202ENST00000345356 DBF4BQ8NFT6 615 aa11.58□□□□□ -0.56
COL12A1-202ENST00000345356 PAQR8Q8TEZ7 354 aa11.58□□□□□ -0.56
COL12A1-202ENST00000345356 RBM18Q96H35 190 aaKnown RBP11.58□□□□□ -0.56
COL12A1-202ENST00000345356 DHRS9Q9BPW9 319 aa11.58□□□□□ -0.56
COL12A1-202ENST00000345356 RBFOX1Q9NWB1 397 aaKnown RBP11.58□□□□□ -0.56
COL12A1-202ENST00000345356 CA5BQ9Y2D0 317 aa11.58□□□□□ -0.56
COL12A1-202ENST00000345356 NAP1L6A6NFF2 107 aa11.57□□□□□ -0.56
COL12A1-202ENST00000345356 CLDN7O95471 211 aa11.57□□□□□ -0.56
COL12A1-202ENST00000345356 OR12D1P0DN82 309 aa11.57□□□□□ -0.56
COL12A1-202ENST00000345356 PFKLP17858 780 aa11.57□□□□□ -0.56
COL12A1-202ENST00000345356 M6PRP20645 277 aa11.57□□□□□ -0.56
COL12A1-202ENST00000345356 CD79BP40259 229 aa11.57□□□□□ -0.56
COL12A1-202ENST00000345356 SLC16A9Q7RTY1 509 aa11.57□□□□□ -0.56
COL12A1-202ENST00000345356 TRIB2Q92519 343 aa11.57□□□□□ -0.56
COL12A1-202ENST00000345356 AHCYL2Q96HN2 611 aaKnown RBP11.57□□□□□ -0.56
COL12A1-202ENST00000345356 FYTTD1Q96QD9 318 aaKnown RBP11.57□□□□□ -0.56
COL12A1-202ENST00000345356 MINDY3Q9H8M7 445 aa11.57□□□□□ -0.56
COL12A1-202ENST00000345356 CARS2Q9HA77 564 aaKnown RBP11.57□□□□□ -0.56
COL12A1-202ENST00000345356 ZNF304Q9HCX3 659 aa11.57□□□□□ -0.56
COL12A1-202ENST00000345356 OARD1Q9Y530 152 aa11.57□□□□□ -0.56
COL12A1-202ENST00000345356 PCDHGA6Q9Y5G7 932 aa11.57□□□□□ -0.56
COL12A1-202ENST00000345356 METTL15A6NJ78 407 aa11.57□□□□□ -0.56
COL12A1-202ENST00000345356 TRIM23P36406 574 aa11.57□□□□□ -0.56
COL12A1-202ENST00000345356 CLCN7P51798 805 aa11.57□□□□□ -0.56
COL12A1-202ENST00000345356 PITX1P78337 314 aaPredicted RBP11.57□□□□□ -0.56
COL12A1-202ENST00000345356 ZNF169Q14929 603 aaPredicted RBP11.57□□□□□ -0.56
COL12A1-202ENST00000345356 ENTHD1Q8IYW4 607 aa11.57□□□□□ -0.56
COL12A1-202ENST00000345356 OR56A1Q8NGH5 318 aa11.57□□□□□ -0.56
COL12A1-202ENST00000345356 OR1J4Q8NGS1 313 aa11.57□□□□□ -0.56
COL12A1-202ENST00000345356 PSKH2Q96QS6 385 aa11.57□□□□□ -0.56
COL12A1-202ENST00000345356 XYLT2Q9H1B5 865 aa11.57□□□□□ -0.56
COL12A1-202ENST00000345356 ASAH2Q9NR71 780 aa11.57□□□□□ -0.56
COL12A1-202ENST00000345356 C14orf28Q4W4Y0 310 aa11.57□□□□□ -0.56
COL12A1-202ENST00000345356 FAM69AQ5T7M9 428 aa11.57□□□□□ -0.56
COL12A1-202ENST00000345356 OR2AJ1Q8NGZ0 328 aa11.57□□□□□ -0.56
COL12A1-202ENST00000345356 GIMAP1Q8WWP7 306 aa11.57□□□□□ -0.56
COL12A1-202ENST00000345356 SORCS1Q8WY21 1168 aa11.57□□□□□ -0.56
COL12A1-202ENST00000345356 LMLNQ96KR4 655 aa11.57□□□□□ -0.56
COL12A1-202ENST00000345356 OR5B12Q96R08 314 aa11.57□□□□□ -0.56
COL12A1-202ENST00000345356 OR2AG1Q9H205 316 aa11.57□□□□□ -0.56
COL12A1-202ENST00000345356 GALNT9Q9HCQ5 603 aa11.57□□□□□ -0.56
COL12A1-202ENST00000345356 NENFQ9UMX5 172 aa11.57□□□□□ -0.56
COL12A1-202ENST00000345356 GPR89AB7ZAQ6 455 aa11.57□□□□□ -0.56
COL12A1-202ENST00000345356 AMY2AP04746 511 aa11.57□□□□□ -0.56
COL12A1-202ENST00000345356 GPR89BP0CG08 455 aa11.57□□□□□ -0.56
COL12A1-202ENST00000345356 ATP1B2P14415 290 aaPredicted RBP11.57□□□□□ -0.56
COL12A1-202ENST00000345356 IDSP22304 550 aa11.57□□□□□ -0.56
COL12A1-202ENST00000345356 MMP12P39900 470 aa11.57□□□□□ -0.56
COL12A1-202ENST00000345356 CHAF1BQ13112 559 aa11.57□□□□□ -0.56
COL12A1-202ENST00000345356 PCGF3Q3KNV8 242 aa11.57□□□□□ -0.56
COL12A1-202ENST00000345356 RAB11FIP2Q7L804 512 aa11.57□□□□□ -0.56
COL12A1-202ENST00000345356 THRSPQ92748 146 aa11.57□□□□□ -0.56
COL12A1-202ENST00000345356 SLC25A36Q96CQ1 311 aa11.57□□□□□ -0.56
COL12A1-202ENST00000345356 FIZ1Q96SL8 496 aa11.57□□□□□ -0.56
COL12A1-202ENST00000345356 MTIF3Q9H2K0 278 aaKnown RBP11.57□□□□□ -0.56
COL12A1-202ENST00000345356 UNKLQ9H9P5 680 aaKnown RBP11.57□□□□□ -0.56
COL12A1-202ENST00000345356 THSD1Q9NS62 852 aa11.57□□□□□ -0.56
COL12A1-202ENST00000345356 VNN3Q9NY84 501 aa11.57□□□□□ -0.56
COL12A1-202ENST00000345356 CORINQ9Y5Q5 1042 aa11.57□□□□□ -0.56
COL12A1-202ENST00000345356 ENPP4Q9Y6X5 453 aa11.57□□□□□ -0.56
COL12A1-202ENST00000345356 CACNA1FO60840 1977 aa11.57□□□□□ -0.56
COL12A1-202ENST00000345356 GXYLT2A0PJZ3 443 aa11.57□□□□□ -0.56
COL12A1-202ENST00000345356 ARL5CA6NH57 179 aa11.57□□□□□ -0.56
COL12A1-202ENST00000345356 MMP3P08254 477 aa11.57□□□□□ -0.56
COL12A1-202ENST00000345356 UBBP0CG47 229 aa11.57□□□□□ -0.56
COL12A1-202ENST00000345356 UBCP0CG48 685 aaKnown RBP11.57□□□□□ -0.56
COL12A1-202ENST00000345356 GABRR2P28476 465 aa11.57□□□□□ -0.56
COL12A1-202ENST00000345356 FRKP42685 505 aaPredicted RBP11.57□□□□□ -0.56
COL12A1-202ENST00000345356 ARSDP51689 593 aa11.57□□□□□ -0.56
COL12A1-202ENST00000345356 ZXDBP98169 803 aa11.57□□□□□ -0.56
COL12A1-202ENST00000345356 LRIT3Q3SXY7 679 aa11.57□□□□□ -0.56
COL12A1-202ENST00000345356 ZNF783Q6ZMS7 281 aa11.57□□□□□ -0.56
COL12A1-202ENST00000345356 SIAH1Q8IUQ4 282 aa11.57□□□□□ -0.56
COL12A1-202ENST00000345356 TP53INP2Q8IXH6 220 aa11.57□□□□□ -0.56
COL12A1-202ENST00000345356 BBS10Q8TAM1 723 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms