RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 OR4K5Q8NGD3 323 aa13.65□□□□□ -0.22
CPSF7-201ENST00000340437 RSPO3Q9BXY4 272 aaPredicted RBP13.65□□□□□ -0.22
CPSF7-201ENST00000340437 RPRD1BQ9NQG5 326 aaKnown RBP13.65□□□□□ -0.22
CPSF7-201ENST00000340437 TXNL4BQ9NX01 149 aaKnown RBP13.65□□□□□ -0.22
CPSF7-201ENST00000340437 SEC14L4Q9UDX3 406 aa13.65□□□□□ -0.22
CPSF7-201ENST00000340437 ENOPH1Q9UHY7 261 aa13.65□□□□□ -0.22
CPSF7-201ENST00000340437 CLEC4AQ9UMR7 237 aa13.65□□□□□ -0.22
CPSF7-201ENST00000340437 SH3D21A4FU49 640 aa13.65□□□□□ -0.23
CPSF7-201ENST00000340437 ANKRD34BA5PLL1 514 aa13.65□□□□□ -0.23
CPSF7-201ENST00000340437 SEMA3DO95025 777 aa13.65□□□□□ -0.23
CPSF7-201ENST00000340437 RECKO95980 971 aa13.65□□□□□ -0.23
CPSF7-201ENST00000340437 CD79BP40259 229 aa13.65□□□□□ -0.23
CPSF7-201ENST00000340437 IL18Q14116 193 aa13.65□□□□□ -0.23
CPSF7-201ENST00000340437 LASP1Q14847 261 aaKnown RBP13.65□□□□□ -0.23
CPSF7-201ENST00000340437 C17orf64Q86WR6 236 aa13.65□□□□□ -0.23
CPSF7-201ENST00000340437 CPXM2Q8N436 756 aa13.65□□□□□ -0.23
CPSF7-201ENST00000340437 CPA6Q8N4T0 437 aa13.65□□□□□ -0.23
CPSF7-201ENST00000340437 C19orf18Q8NEA5 215 aa13.65□□□□□ -0.23
CPSF7-201ENST00000340437 TP53INP1Q96A56 240 aa13.65□□□□□ -0.23
CPSF7-201ENST00000340437 ARSGQ96EG1 525 aa13.65□□□□□ -0.23
CPSF7-201ENST00000340437 C17orf62Q9BQA9 187 aa13.65□□□□□ -0.23
CPSF7-201ENST00000340437 OR51I1Q9H343 314 aa13.65□□□□□ -0.23
CPSF7-201ENST00000340437 TMEM38AQ9H6F2 299 aa13.65□□□□□ -0.23
CPSF7-201ENST00000340437 SCN5AQ14524 2016 aa13.64□□□□□ -0.23
CPSF7-201ENST00000340437 C2orf92A0A1B0GVN3 265 aa13.64□□□□□ -0.23
CPSF7-201ENST00000340437 HOXC11O43248 304 aaPredicted RBP13.64□□□□□ -0.23
CPSF7-201ENST00000340437 MPP7Q5T2T1 576 aa13.64□□□□□ -0.23
CPSF7-201ENST00000340437 ZNF57Q68EA5 555 aaPredicted RBP13.64□□□□□ -0.23
CPSF7-201ENST00000340437 PGBD2Q6P3X8 592 aa13.64□□□□□ -0.23
CPSF7-201ENST00000340437 FAM83HQ6ZRV2 1179 aaPredicted RBP13.64□□□□□ -0.23
CPSF7-201ENST00000340437 GHDCQ8N2G8 530 aa13.64□□□□□ -0.23
CPSF7-201ENST00000340437 SPHK2Q9NRA0 654 aa13.64□□□□□ -0.23
CPSF7-201ENST00000340437 SNX7Q9UNH6 387 aa13.64□□□□□ -0.23
CPSF7-201ENST00000340437 FAM25AB3EWG3 89 aa13.64□□□□□ -0.23
CPSF7-201ENST00000340437 FAM25CB3EWG5 89 aa13.64□□□□□ -0.23
CPSF7-201ENST00000340437 FAM25GB3EWG6 89 aa13.64□□□□□ -0.23
CPSF7-201ENST00000340437 CCNYL3P0C7X3 344 aa13.64□□□□□ -0.23
CPSF7-201ENST00000340437 MYL9P24844 172 aa13.64□□□□□ -0.23
CPSF7-201ENST00000340437 SOX18P35713 384 aa13.64□□□□□ -0.23
CPSF7-201ENST00000340437 MESP2Q0VG99 397 aa13.64□□□□□ -0.23
CPSF7-201ENST00000340437 ZNF805Q5CZA5 627 aa13.64□□□□□ -0.23
CPSF7-201ENST00000340437 MLIPQ5VWP3 458 aa13.64□□□□□ -0.23
CPSF7-201ENST00000340437 TRIQKQ629K1 86 aa13.64□□□□□ -0.23
CPSF7-201ENST00000340437 HOMEZQ8IX15 550 aa13.64□□□□□ -0.23
CPSF7-201ENST00000340437 ADGRF3Q8IZF5 1079 aa13.64□□□□□ -0.23
CPSF7-201ENST00000340437 KRT78Q8N1N4 520 aa13.64□□□□□ -0.23
CPSF7-201ENST00000340437 BBS4Q96RK4 519 aa13.64□□□□□ -0.23
CPSF7-201ENST00000340437 TREX2Q9BQ50 279 aaPredicted RBP13.64□□□□□ -0.23
CPSF7-201ENST00000340437 CAPN10Q9HC96 672 aa13.64□□□□□ -0.23
CPSF7-201ENST00000340437 TRPV5Q9NQA5 729 aa13.64□□□□□ -0.23
CPSF7-201ENST00000340437 CNOT2Q9NZN8 540 aaKnown RBP13.64□□□□□ -0.23
CPSF7-201ENST00000340437 SLC13A4Q9UKG4 626 aa13.64□□□□□ -0.23
CPSF7-201ENST00000340437 MAPRE3Q9UPY8 281 aa13.64□□□□□ -0.23
CPSF7-201ENST00000340437 PCYT1BQ9Y5K3 369 aaPredicted RBP13.64□□□□□ -0.23
CPSF7-201ENST00000340437 CPSF4LA6NMK7 179 aaKnown RBP13.63□□□□□ -0.23
CPSF7-201ENST00000340437 PITPNM1O00562 1244 aa13.63□□□□□ -0.23
CPSF7-201ENST00000340437 OLFM2O95897 454 aa13.63□□□□□ -0.23
CPSF7-201ENST00000340437 NR2F6P10588 404 aa13.63□□□□□ -0.23
CPSF7-201ENST00000340437 IFI30P13284 250 aa13.63□□□□□ -0.23
CPSF7-201ENST00000340437 TM4SF4P48230 202 aa13.63□□□□□ -0.23
CPSF7-201ENST00000340437 MAN2A2P49641 1150 aa13.63□□□□□ -0.23
CPSF7-201ENST00000340437 SLC16A1P53985 500 aa13.63□□□□□ -0.23
CPSF7-201ENST00000340437 EEF1A2Q05639 463 aaKnown RBP13.63□□□□□ -0.23
CPSF7-201ENST00000340437 NOGQ13253 232 aa13.63□□□□□ -0.23
CPSF7-201ENST00000340437 PDZD3Q86UT5 571 aa13.63□□□□□ -0.23
CPSF7-201ENST00000340437 COMTD1Q86VU5 262 aa13.63□□□□□ -0.23
CPSF7-201ENST00000340437 SLC43A3Q8NBI5 491 aa13.63□□□□□ -0.23
CPSF7-201ENST00000340437 OR8J1Q8NGP2 316 aa13.63□□□□□ -0.23
CPSF7-201ENST00000340437 LILRB4Q8NHJ6 448 aa13.63□□□□□ -0.23
CPSF7-201ENST00000340437 KAT2AQ92830 837 aa13.63□□□□□ -0.23
CPSF7-201ENST00000340437 COL26A1Q96A83 441 aa13.63□□□□□ -0.23
CPSF7-201ENST00000340437 DACT3Q96B18 629 aaPredicted RBP13.63□□□□□ -0.23
CPSF7-201ENST00000340437 SLC6A18Q96N87 628 aa13.63□□□□□ -0.23
CPSF7-201ENST00000340437 ZNF607Q96SK3 696 aa13.63□□□□□ -0.23
CPSF7-201ENST00000340437 CCDC32Q9BV29 185 aa13.63□□□□□ -0.23
CPSF7-201ENST00000340437 MYNNQ9NPC7 610 aa13.63□□□□□ -0.23
CPSF7-201ENST00000340437 TDP1Q9NUW8 608 aa13.63□□□□□ -0.23
CPSF7-201ENST00000340437 AHSPQ9NZD4 102 aa13.63□□□□□ -0.23
CPSF7-201ENST00000340437 NLKQ9UBE8 527 aa13.63□□□□□ -0.23
CPSF7-201ENST00000340437 REV1Q9UBZ9 1251 aa13.63□□□□□ -0.23
CPSF7-201ENST00000340437 FBXW2Q9UKT8 454 aa13.63□□□□□ -0.23
CPSF7-201ENST00000340437 PPIL1Q9Y3C6 166 aa13.63□□□□□ -0.23
CPSF7-201ENST00000340437 A3GALT2U3KPV4 340 aa13.63□□□□□ -0.23
CPSF7-201ENST00000340437 V9GYH0 126 aa13.63□□□□□ -0.23
CPSF7-201ENST00000340437 SCN8AQ9UQD0 1980 aa13.63□□□□□ -0.23
CPSF7-201ENST00000340437 KLHL18O94889 574 aa13.63□□□□□ -0.23
CPSF7-201ENST00000340437 ADAP00813 363 aa13.63□□□□□ -0.23
CPSF7-201ENST00000340437 MMP11P24347 488 aa13.63□□□□□ -0.23
CPSF7-201ENST00000340437 PSPHP78330 225 aa13.63□□□□□ -0.23
CPSF7-201ENST00000340437 SLC7A9P82251 487 aa13.63□□□□□ -0.23
CPSF7-201ENST00000340437 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.63□□□□□ -0.23
CPSF7-201ENST00000340437 SLC9B2Q86UD5 537 aa13.63□□□□□ -0.23
CPSF7-201ENST00000340437 OR52P1PQ8NH57 321 aa13.63□□□□□ -0.23
CPSF7-201ENST00000340437 ST6GAL2Q96JF0 529 aa13.63□□□□□ -0.23
CPSF7-201ENST00000340437 GPA33Q99795 319 aa13.63□□□□□ -0.23
CPSF7-201ENST00000340437 DNAH14Q0VDD8 3507 aa13.63□□□□□ -0.23
CPSF7-201ENST00000340437 CD8B2A6NJW9 211 aa13.63□□□□□ -0.23
CPSF7-201ENST00000340437 CD8BP10966 210 aa13.63□□□□□ -0.23
CPSF7-201ENST00000340437 CSF2RAP15509 400 aa13.63□□□□□ -0.23
CPSF7-201ENST00000340437 CELP19835 753 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms