RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 HLCSP50747 726 aa12.53□□□□□ -0.4
HLCS-201ENST00000336648 OR5L2Q8NGL0 311 aa12.53□□□□□ -0.4
HLCS-201ENST00000336648 TWNKQ96RR1 684 aa12.53□□□□□ -0.4
HLCS-201ENST00000336648 ZNF559Q9BR84 538 aa12.53□□□□□ -0.4
HLCS-201ENST00000336648 HOXD1Q9GZZ0 328 aa12.53□□□□□ -0.4
HLCS-201ENST00000336648 RAB9BQ9NP90 201 aa12.53□□□□□ -0.4
HLCS-201ENST00000336648 CYP8B1Q9UNU6 501 aa12.53□□□□□ -0.4
HLCS-201ENST00000336648 ST14Q9Y5Y6 855 aa12.53□□□□□ -0.4
HLCS-201ENST00000336648 ZNF541Q9H0D2 1346 aa12.53□□□□□ -0.4
HLCS-201ENST00000336648 MTMR11A4FU01 709 aa12.53□□□□□ -0.4
HLCS-201ENST00000336648 HHLA1C9JL84 531 aa12.53□□□□□ -0.4
HLCS-201ENST00000336648 LEFTY2O00292 366 aa12.53□□□□□ -0.4
HLCS-201ENST00000336648 ACTBP60709 375 aa12.53□□□□□ -0.4
HLCS-201ENST00000336648 ACTG1P63261 375 aa12.53□□□□□ -0.4
HLCS-201ENST00000336648 DYRK1AQ13627 763 aa12.53□□□□□ -0.4
HLCS-201ENST00000336648 TMPPEQ6ZT21 453 aa12.53□□□□□ -0.4
HLCS-201ENST00000336648 TRUB1Q8WWH5 349 aaKnown RBP12.53□□□□□ -0.4
HLCS-201ENST00000336648 SLC41A3Q96GZ6 507 aa12.53□□□□□ -0.4
HLCS-201ENST00000336648 SMOQ99835 787 aa12.53□□□□□ -0.4
HLCS-201ENST00000336648 MRI1Q9BV20 369 aa12.53□□□□□ -0.4
HLCS-201ENST00000336648 SLC6A16Q9GZN6 736 aa12.53□□□□□ -0.4
HLCS-201ENST00000336648 ATG5Q9H1Y0 275 aa12.53□□□□□ -0.4
HLCS-201ENST00000336648 TMEM100Q9NV29 134 aa12.53□□□□□ -0.4
HLCS-201ENST00000336648 AIG1Q9NVV5 245 aa12.53□□□□□ -0.4
HLCS-201ENST00000336648 GFOD1Q9NXC2 390 aa12.53□□□□□ -0.4
HLCS-201ENST00000336648 GRXCR1A8MXD5 290 aa12.53□□□□□ -0.4
HLCS-201ENST00000336648 A8MXE2 369 aa12.53□□□□□ -0.4
HLCS-201ENST00000336648 INPPL1O15357 1258 aa12.53□□□□□ -0.4
HLCS-201ENST00000336648 CREBL2O60519 120 aaPredicted RBP12.53□□□□□ -0.4
HLCS-201ENST00000336648 CD1DP15813 335 aa12.53□□□□□ -0.4
HLCS-201ENST00000336648 RIDAP52758 137 aaKnown RBP12.53□□□□□ -0.4
HLCS-201ENST00000336648 RABGGTBP53611 331 aa12.53□□□□□ -0.4
HLCS-201ENST00000336648 HTD2P86397 168 aa12.53□□□□□ -0.4
HLCS-201ENST00000336648 DEFA6Q01524 100 aa12.53□□□□□ -0.4
HLCS-201ENST00000336648 SEMG2Q02383 582 aa12.53□□□□□ -0.4
HLCS-201ENST00000336648 AARDQ4LEZ3 155 aa12.53□□□□□ -0.4
HLCS-201ENST00000336648 TMEM205Q6UW68 189 aa12.53□□□□□ -0.4
HLCS-201ENST00000336648 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.53□□□□□ -0.4
HLCS-201ENST00000336648 CEACAM19Q7Z692 300 aa12.53□□□□□ -0.4
HLCS-201ENST00000336648 UMODL1-AS1Q8N2C9 162 aa12.53□□□□□ -0.4
HLCS-201ENST00000336648 NUP43Q8NFH3 380 aa12.53□□□□□ -0.4
HLCS-201ENST00000336648 ARL11Q969Q4 196 aa12.53□□□□□ -0.4
HLCS-201ENST00000336648 OR8D2Q9GZM6 311 aa12.53□□□□□ -0.4
HLCS-201ENST00000336648 FAM86C1Q9NVL1 165 aa12.53□□□□□ -0.4
HLCS-201ENST00000336648 PAK1IP1Q9NWT1 392 aaPredicted RBP12.53□□□□□ -0.4
HLCS-201ENST00000336648 KCNS2Q9ULS6 477 aa12.53□□□□□ -0.4
HLCS-201ENST00000336648 TYROBPO43914 113 aa12.53□□□□□ -0.4
HLCS-201ENST00000336648 GNB3P16520 340 aa12.53□□□□□ -0.4
HLCS-201ENST00000336648 RAB3BP20337 219 aa12.53□□□□□ -0.4
HLCS-201ENST00000336648 KDELR2P33947 212 aa12.53□□□□□ -0.4
HLCS-201ENST00000336648 TECRLQ5HYJ1 363 aa12.53□□□□□ -0.4
HLCS-201ENST00000336648 CMTM8Q8IZV2 173 aa12.53□□□□□ -0.4
HLCS-201ENST00000336648 CHFRQ96EP1 664 aa12.53□□□□□ -0.4
HLCS-201ENST00000336648 C17orf62Q9BQA9 187 aa12.53□□□□□ -0.4
HLCS-201ENST00000336648 HSD3B7Q9H2F3 369 aa12.53□□□□□ -0.4
HLCS-201ENST00000336648 FN3KQ9H479 309 aa12.53□□□□□ -0.4
HLCS-201ENST00000336648 ACSL6Q9UKU0 697 aa12.53□□□□□ -0.4
HLCS-201ENST00000336648 ARHGEF28Q8N1W1 1705 aaKnown RBP12.52□□□□□ -0.4
HLCS-201ENST00000336648 NPC1O15118 1278 aa12.52□□□□□ -0.4
HLCS-201ENST00000336648 SLC22A10Q63ZE4 541 aa12.52□□□□□ -0.4
HLCS-201ENST00000336648 LRRC25Q8N386 305 aaPredicted RBP12.52□□□□□ -0.4
HLCS-201ENST00000336648 Q8N402 240 aa12.52□□□□□ -0.4
HLCS-201ENST00000336648 FRZBQ92765 325 aa12.52□□□□□ -0.4
HLCS-201ENST00000336648 IMP4Q96G21 291 aaKnown RBP12.52□□□□□ -0.4
HLCS-201ENST00000336648 HYLS1Q96M11 299 aa12.52□□□□□ -0.4
HLCS-201ENST00000336648 CNN2Q99439 309 aaKnown RBP12.52□□□□□ -0.4
HLCS-201ENST00000336648 ZNF696Q9H7X3 374 aa12.52□□□□□ -0.4
HLCS-201ENST00000336648 MINDY3Q9H8M7 445 aa12.52□□□□□ -0.4
HLCS-201ENST00000336648 RXFP3Q9NSD7 469 aa12.52□□□□□ -0.4
HLCS-201ENST00000336648 PLEKHM1Q9Y4G2 1056 aa12.52□□□□□ -0.4
HLCS-201ENST00000336648 PCDH17O14917 1159 aa12.52□□□□□ -0.4
HLCS-201ENST00000336648 C8orf89P0DMQ9 161 aa12.52□□□□□ -0.4
HLCS-201ENST00000336648 AMY2BP19961 511 aa12.52□□□□□ -0.4
HLCS-201ENST00000336648 PRKACGP22612 351 aa12.52□□□□□ -0.4
HLCS-201ENST00000336648 MOGSQ13724 837 aa12.52□□□□□ -0.4
HLCS-201ENST00000336648 KIAA0319Q5VV43 1072 aa12.52□□□□□ -0.4
HLCS-201ENST00000336648 WDR53Q7Z5U6 358 aaPredicted RBP12.52□□□□□ -0.4
HLCS-201ENST00000336648 GLYATL1Q969I3 302 aa12.52□□□□□ -0.4
HLCS-201ENST00000336648 C3orf49Q96BT1 292 aa12.52□□□□□ -0.4
HLCS-201ENST00000336648 SLC6A7Q99884 636 aa12.52□□□□□ -0.4
HLCS-201ENST00000336648 ACOT13Q9NPJ3 140 aa12.52□□□□□ -0.4
HLCS-201ENST00000336648 ASB4Q9Y574 426 aa12.52□□□□□ -0.4
HLCS-201ENST00000336648 MEGF11A6BM72 1044 aa12.52□□□□□ -0.41
HLCS-201ENST00000336648 LILRB5O75023 590 aa12.52□□□□□ -0.41
HLCS-201ENST00000336648 RNH1P13489 461 aaKnown RBP12.52□□□□□ -0.41
HLCS-201ENST00000336648 IFNGR1P15260 489 aa12.52□□□□□ -0.41
HLCS-201ENST00000336648 NDUFV2P19404 249 aa12.52□□□□□ -0.41
HLCS-201ENST00000336648 ACRV1P26436 265 aa12.52□□□□□ -0.41
HLCS-201ENST00000336648 PREPP48147 710 aa12.52□□□□□ -0.41
HLCS-201ENST00000336648 PPP5CP53041 499 aa12.52□□□□□ -0.41
HLCS-201ENST00000336648 PCBP2Q15366 365 aaKnown RBP eCLIP12.52□□□□□ -0.413e-6■■■■□ 23.5
HLCS-201ENST00000336648 GSG1LQ6UXU4 331 aa12.52□□□□□ -0.41
HLCS-201ENST00000336648 GTPBP8Q8N3Z3 284 aaPredicted RBP12.52□□□□□ -0.41
HLCS-201ENST00000336648 CLDN19Q8N6F1 224 aa12.52□□□□□ -0.41
HLCS-201ENST00000336648 TXNDC5Q8NBS9 432 aaKnown RBP12.52□□□□□ -0.41
HLCS-201ENST00000336648 WDR92Q96MX6 357 aa12.52□□□□□ -0.41
HLCS-201ENST00000336648 VRK1Q99986 396 aaPredicted RBP12.52□□□□□ -0.41
HLCS-201ENST00000336648 ARMC1Q9NVT9 282 aa12.52□□□□□ -0.41
HLCS-201ENST00000336648 CLEC4EQ9ULY5 219 aa12.52□□□□□ -0.41
HLCS-201ENST00000336648 SDHDO14521 159 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms