RNA–Protein interactions for RNA: ENST00000328354.10

CHEK2-201, Transcript of checkpoint kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHEK2, Length 1,867 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-201ENST00000328354 RAD23AP54725 363 aa13.4□□□□□ -0.26
CHEK2-201ENST00000328354 ZIK1Q3SY52 487 aaPredicted RBP13.4□□□□□ -0.26
CHEK2-201ENST00000328354 RPS26P11Q5JNZ5 115 aaPredicted RBP13.4□□□□□ -0.26
CHEK2-201ENST00000328354 PRAMEF8Q5VWM4 474 aa13.4□□□□□ -0.26
CHEK2-201ENST00000328354 PRAMEF7Q5VXH5 474 aa13.4□□□□□ -0.26
CHEK2-201ENST00000328354 SZRD1Q7Z422 152 aa13.4□□□□□ -0.26
CHEK2-201ENST00000328354 MCATQ8IVS2 390 aaKnown RBP13.4□□□□□ -0.26
CHEK2-201ENST00000328354 OR5D16Q8NGK9 328 aa13.4□□□□□ -0.26
CHEK2-201ENST00000328354 ZNF285Q96NJ3 590 aa13.4□□□□□ -0.26
CHEK2-201ENST00000328354 BARD1Q99728 777 aaKnown RBP13.4□□□□□ -0.26
CHEK2-201ENST00000328354 AMBRA1Q9C0C7 1298 aa13.4□□□□□ -0.26
CHEK2-201ENST00000328354 CLK4Q9HAZ1 481 aaKnown RBP13.4□□□□□ -0.26
CHEK2-201ENST00000328354 BCL2L10Q9HD36 194 aa13.4□□□□□ -0.26
CHEK2-201ENST00000328354 NAALAD2Q9Y3Q0 740 aa13.4□□□□□ -0.26
CHEK2-201ENST00000328354 CSNK1G3Q9Y6M4 447 aa13.4□□□□□ -0.26
CHEK2-201ENST00000328354 SPACA6W5XKT8 324 aa13.4□□□□□ -0.26
CHEK2-201ENST00000328354 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.39□□□□□ -0.27
CHEK2-201ENST00000328354 IFI6P09912 130 aa13.39□□□□□ -0.27
CHEK2-201ENST00000328354 ITGAMP11215 1152 aa13.39□□□□□ -0.27
CHEK2-201ENST00000328354 PPP2R1BP30154 601 aa13.39□□□□□ -0.27
CHEK2-201ENST00000328354 RRM2P31350 389 aa13.39□□□□□ -0.27
CHEK2-201ENST00000328354 MC3RP41968 323 aa13.39□□□□□ -0.27
CHEK2-201ENST00000328354 XCR1P46094 333 aa13.39□□□□□ -0.27
CHEK2-201ENST00000328354 GABRA4P48169 554 aa13.39□□□□□ -0.27
CHEK2-201ENST00000328354 MAN2A2P49641 1150 aa13.39□□□□□ -0.27
CHEK2-201ENST00000328354 SIM1P81133 766 aaPredicted RBP13.39□□□□□ -0.27
CHEK2-201ENST00000328354 KCNC4Q03721 635 aa13.39□□□□□ -0.27
CHEK2-201ENST00000328354 KCNAB2Q13303 367 aa13.39□□□□□ -0.27
CHEK2-201ENST00000328354 LASP1Q14847 261 aaKnown RBP13.39□□□□□ -0.27
CHEK2-201ENST00000328354 DUSP7Q16829 419 aa13.39□□□□□ -0.27
CHEK2-201ENST00000328354 FAHD1Q6P587 224 aa13.39□□□□□ -0.27
CHEK2-201ENST00000328354 ISLR2Q6UXK2 745 aa13.39□□□□□ -0.27
CHEK2-201ENST00000328354 CYP4Z1Q86W10 505 aa13.39□□□□□ -0.27
CHEK2-201ENST00000328354 CA13Q8N1Q1 262 aa13.39□□□□□ -0.27
CHEK2-201ENST00000328354 SMYD1Q8NB12 490 aa13.39□□□□□ -0.27
CHEK2-201ENST00000328354 NUP43Q8NFH3 380 aa13.39□□□□□ -0.27
CHEK2-201ENST00000328354 XAGE5Q8WWM1 108 aa13.39□□□□□ -0.27
CHEK2-201ENST00000328354 RASSF5Q8WWW0 418 aa13.39□□□□□ -0.27
CHEK2-201ENST00000328354 GIMAP5Q96F15 307 aa13.39□□□□□ -0.27
CHEK2-201ENST00000328354 ZNF607Q96SK3 696 aa13.39□□□□□ -0.27
CHEK2-201ENST00000328354 TREX2Q9BQ50 279 aaPredicted RBP13.39□□□□□ -0.27
CHEK2-201ENST00000328354 YTHDF1Q9BYJ9 559 aaKnown RBP13.39□□□□□ -0.27
CHEK2-201ENST00000328354 FAM192AQ9GZU8 254 aa13.39□□□□□ -0.27
CHEK2-201ENST00000328354 RUBCNLQ9H714 662 aa13.39□□□□□ -0.27
CHEK2-201ENST00000328354 ORC6Q9Y5N6 252 aa13.39□□□□□ -0.27
CHEK2-201ENST00000328354 LYVE1Q9Y5Y7 322 aa13.39□□□□□ -0.27
CHEK2-201ENST00000328354 GPC6Q9Y625 555 aaPredicted RBP13.39□□□□□ -0.27
CHEK2-201ENST00000328354 A0A1B0GTW7 788 aa13.38□□□□□ -0.27
CHEK2-201ENST00000328354 MYOCOSA0A1B0GUC4 107 aa13.38□□□□□ -0.27
CHEK2-201ENST00000328354 ZNF860A6NHJ4 632 aa13.38□□□□□ -0.27
CHEK2-201ENST00000328354 SLC16A6O15403 523 aa13.38□□□□□ -0.27
CHEK2-201ENST00000328354 SLC28A2O43868 658 aa13.38□□□□□ -0.27
CHEK2-201ENST00000328354 SDC3O75056 442 aa13.38□□□□□ -0.27
CHEK2-201ENST00000328354 CLPTM1O96005 669 aa13.38□□□□□ -0.27
CHEK2-201ENST00000328354 TFAP2AP05549 437 aa13.38□□□□□ -0.27
CHEK2-201ENST00000328354 CPMP14384 443 aa13.38□□□□□ -0.27
CHEK2-201ENST00000328354 TNFRSF1BP20333 461 aa13.38□□□□□ -0.27
CHEK2-201ENST00000328354 IGFBP5P24593 272 aa13.38□□□□□ -0.27
CHEK2-201ENST00000328354 PTGER1P34995 402 aa13.38□□□□□ -0.27
CHEK2-201ENST00000328354 OR1E2P47887 323 aa13.38□□□□□ -0.27
CHEK2-201ENST00000328354 DAPP51397 102 aa13.38□□□□□ -0.27
CHEK2-201ENST00000328354 CRISP3P54108 245 aa13.38□□□□□ -0.27
CHEK2-201ENST00000328354 PRKAG1P54619 331 aa13.38□□□□□ -0.27
CHEK2-201ENST00000328354 OLR1P78380 273 aa13.38□□□□□ -0.27
CHEK2-201ENST00000328354 FUT5Q11128 374 aa13.38□□□□□ -0.27
CHEK2-201ENST00000328354 GNA13Q14344 377 aa13.38□□□□□ -0.27
CHEK2-201ENST00000328354 LTB4RQ15722 352 aa13.38□□□□□ -0.27
CHEK2-201ENST00000328354 SYPL1Q16563 259 aa13.38□□□□□ -0.27
CHEK2-201ENST00000328354 C6orf132Q5T0Z8 1188 aa13.38□□□□□ -0.27
CHEK2-201ENST00000328354 CWF19L1Q69YN2 538 aaKnown RBP13.38□□□□□ -0.27
CHEK2-201ENST00000328354 TTC33Q6PID6 262 aaPredicted RBP13.38□□□□□ -0.27
CHEK2-201ENST00000328354 ZNF605Q86T29 641 aa13.38□□□□□ -0.27
CHEK2-201ENST00000328354 SLC44A2Q8IWA5 706 aaPredicted RBP13.38□□□□□ -0.27
CHEK2-201ENST00000328354 OFCC1Q8IZS5 231 aa13.38□□□□□ -0.27
CHEK2-201ENST00000328354 ZNF555Q8NEP9 628 aa13.38□□□□□ -0.27
CHEK2-201ENST00000328354 GPR32P1Q8NGA4 272 aa13.38□□□□□ -0.27
CHEK2-201ENST00000328354 OR4C15Q8NGM1 316 aa13.38□□□□□ -0.27
CHEK2-201ENST00000328354 BBS10Q8TAM1 723 aa13.38□□□□□ -0.27
CHEK2-201ENST00000328354 MAGED4Q96JG8 741 aa13.38□□□□□ -0.27
CHEK2-201ENST00000328354 MUS81Q96NY9 551 aa13.38□□□□□ -0.27
CHEK2-201ENST00000328354 RSPO3Q9BXY4 272 aaPredicted RBP13.38□□□□□ -0.27
CHEK2-201ENST00000328354 PDP1Q9P0J1 537 aaPredicted RBP13.38□□□□□ -0.27
CHEK2-201ENST00000328354 TRPC4Q9UBN4 977 aa13.38□□□□□ -0.27
CHEK2-201ENST00000328354 ENPP4Q9Y6X5 453 aa13.38□□□□□ -0.27
CHEK2-201ENST00000328354 ASXL3Q9C0F0 2248 aa13.38□□□□□ -0.27
CHEK2-201ENST00000328354 TLCD2A6NGC4 264 aa13.38□□□□□ -0.27
CHEK2-201ENST00000328354 JRKO75564 520 aa13.38□□□□□ -0.27
CHEK2-201ENST00000328354 NR2F1P10589 423 aa13.38□□□□□ -0.27
CHEK2-201ENST00000328354 ETS2P15036 469 aa13.38□□□□□ -0.27
CHEK2-201ENST00000328354 PORP16435 677 aaPredicted RBP13.38□□□□□ -0.27
CHEK2-201ENST00000328354 NELFEP18615 380 aaKnown RBP13.38□□□□□ -0.27
CHEK2-201ENST00000328354 PIGAP37287 484 aa13.38□□□□□ -0.27
CHEK2-201ENST00000328354 RPL5P46777 297 aaKnown RBP13.38□□□□□ -0.27
CHEK2-201ENST00000328354 KCNJ5P48544 419 aa13.38□□□□□ -0.27
CHEK2-201ENST00000328354 HMGA2P52926 109 aa13.38□□□□□ -0.27
CHEK2-201ENST00000328354 RAB38P57729 211 aa13.38□□□□□ -0.27
CHEK2-201ENST00000328354 PUM1Q14671 1186 aaKnown RBP eCLIP13.38□□□□□ -0.27
CHEK2-201ENST00000328354 DEFB110Q30KQ9 67 aa13.38□□□□□ -0.27
CHEK2-201ENST00000328354 NIPAL1Q6NVV3 410 aa13.38□□□□□ -0.27
CHEK2-201ENST00000328354 OR2L13Q8N349 312 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms