RNA–Protein interactions for RNA: ENST00000317233.8

AFF3-201, Transcript of AF4/FMR2 family member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene AFF3, Length 8,135 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-201ENST00000317233 OR2T33Q8NG76 320 aa12.66□□□□□ -0.38
AFF3-201ENST00000317233 MUCL1Q96DR8 90 aa12.66□□□□□ -0.38
AFF3-201ENST00000317233 HDHD5Q9BXW7 423 aa12.66□□□□□ -0.38
AFF3-201ENST00000317233 LHX5Q9H2C1 402 aa12.66□□□□□ -0.38
AFF3-201ENST00000317233 DCAF16Q9NXF7 216 aa12.66□□□□□ -0.38
AFF3-201ENST00000317233 ZMAT5Q9UDW3 170 aaKnown RBP12.66□□□□□ -0.38
AFF3-201ENST00000317233 COL1A2P08123 1366 aa12.66□□□□□ -0.38
AFF3-201ENST00000317233 EEF1E1O43324 174 aaKnown RBP12.66□□□□□ -0.38
AFF3-201ENST00000317233 HOXD11P31277 338 aaPredicted RBP12.66□□□□□ -0.38
AFF3-201ENST00000317233 POU4F2Q12837 409 aa12.66□□□□□ -0.38
AFF3-201ENST00000317233 IL20RBQ6UXL0 311 aa12.66□□□□□ -0.38
AFF3-201ENST00000317233 B3GLCTQ6Y288 498 aa12.66□□□□□ -0.38
AFF3-201ENST00000317233 FAM109AQ8N4B1 249 aa12.66□□□□□ -0.38
AFF3-201ENST00000317233 LRRC4CQ9HCJ2 640 aa12.66□□□□□ -0.38
AFF3-201ENST00000317233 TCAF1Q9Y4C2 921 aa12.66□□□□□ -0.38
AFF3-201ENST00000317233 ADH1BP00325 375 aa12.65□□□□□ -0.38
AFF3-201ENST00000317233 CRHBPP24387 322 aa12.65□□□□□ -0.38
AFF3-201ENST00000317233 MC3RP41968 323 aa12.65□□□□□ -0.38
AFF3-201ENST00000317233 ERVK-8P63133 956 aa12.65□□□□□ -0.38
AFF3-201ENST00000317233 AADACL2Q6P093 401 aa12.65□□□□□ -0.38
AFF3-201ENST00000317233 PLPPR4Q7Z2D5 763 aa12.65□□□□□ -0.38
AFF3-201ENST00000317233 NANPQ8TBE9 248 aa12.65□□□□□ -0.38
AFF3-201ENST00000317233 ZNF334Q9HCZ1 680 aaPredicted RBP12.65□□□□□ -0.38
AFF3-201ENST00000317233 A0A1W2PPW3 197 aa12.65□□□□□ -0.38
AFF3-201ENST00000317233 CDH1P12830 882 aa12.65□□□□□ -0.38
AFF3-201ENST00000317233 DNASE1P24855 282 aa12.65□□□□□ -0.38
AFF3-201ENST00000317233 SHMT1P34896 483 aa12.65□□□□□ -0.38
AFF3-201ENST00000317233 IL10RBQ08334 325 aa12.65□□□□□ -0.38
AFF3-201ENST00000317233 FRG2Q64ET8 278 aa12.65□□□□□ -0.38
AFF3-201ENST00000317233 FRG2BQ96QU4 278 aa12.65□□□□□ -0.38
AFF3-201ENST00000317233 NUDT9Q9BW91 350 aa12.65□□□□□ -0.38
AFF3-201ENST00000317233 HCN4Q9Y3Q4 1203 aa12.65□□□□□ -0.38
AFF3-201ENST00000317233 LRP5LA4QPB2 252 aa12.65□□□□□ -0.38
AFF3-201ENST00000317233 SOX14O95416 240 aa12.65□□□□□ -0.38
AFF3-201ENST00000317233 PTHP01270 115 aa12.65□□□□□ -0.38
AFF3-201ENST00000317233 CDK1P06493 297 aa12.65□□□□□ -0.38
AFF3-201ENST00000317233 RAB13P51153 203 aa12.65□□□□□ -0.38
AFF3-201ENST00000317233 LINC00116Q8NCU8 138 aa12.65□□□□□ -0.38
AFF3-201ENST00000317233 LMF2Q9BU23 707 aaKnown RBP12.65□□□□□ -0.38
AFF3-201ENST00000317233 ACSS2Q9NR19 701 aa12.65□□□□□ -0.38
AFF3-201ENST00000317233 SIDT1Q9NXL6 827 aaKnown RBP12.65□□□□□ -0.38
AFF3-201ENST00000317233 SMIM35A0A1B0GVV1 85 aa12.65□□□□□ -0.38
AFF3-201ENST00000317233 A0A1W2PPH5 198 aa12.65□□□□□ -0.38
AFF3-201ENST00000317233 OR2M5A3KFT3 312 aa12.65□□□□□ -0.38
AFF3-201ENST00000317233 EEF1E1-BLOC1S5C9J1V9 151 aa12.65□□□□□ -0.38
AFF3-201ENST00000317233 PLCXD2Q0VAA5 305 aa12.65□□□□□ -0.38
AFF3-201ENST00000317233 LCTLQ6UWM7 567 aa12.65□□□□□ -0.38
AFF3-201ENST00000317233 NPAS4Q8IUM7 802 aa12.65□□□□□ -0.38
AFF3-201ENST00000317233 UEVLDQ8IX04 471 aa12.65□□□□□ -0.38
AFF3-201ENST00000317233 KIAA0895Q8NCT3 520 aa12.65□□□□□ -0.38
AFF3-201ENST00000317233 PXYLP1Q8TE99 480 aa12.65□□□□□ -0.38
AFF3-201ENST00000317233 C2orf15Q8WU43 125 aaKnown RBP12.65□□□□□ -0.38
AFF3-201ENST00000317233 IRGQQ8WZA9 623 aa12.65□□□□□ -0.38
AFF3-201ENST00000317233 DPCDQ9BVM2 203 aaPredicted RBP12.65□□□□□ -0.38
AFF3-201ENST00000317233 COQ10BQ9H8M1 238 aa12.65□□□□□ -0.38
AFF3-201ENST00000317233 COL20A1Q9P218 1284 aa12.65□□□□□ -0.38
AFF3-201ENST00000317233 USP2O75604 605 aaPredicted RBP12.65□□□□□ -0.38
AFF3-201ENST00000317233 LCATP04180 440 aa12.65□□□□□ -0.38
AFF3-201ENST00000317233 ZNF728P0DKX0 622 aa12.65□□□□□ -0.38
AFF3-201ENST00000317233 AQP2P41181 271 aa12.65□□□□□ -0.38
AFF3-201ENST00000317233 TLE4Q04727 773 aa12.65□□□□□ -0.38
AFF3-201ENST00000317233 HNRNPA0Q13151 305 aaKnown RBP12.65□□□□□ -0.38
AFF3-201ENST00000317233 LIN52Q52LA3 116 aa12.65□□□□□ -0.38
AFF3-201ENST00000317233 SMPDL3AQ92484 453 aa12.65□□□□□ -0.38
AFF3-201ENST00000317233 RNF170Q96K19 258 aa12.65□□□□□ -0.38
AFF3-201ENST00000317233 SORCS2Q96PQ0 1159 aa12.65□□□□□ -0.38
AFF3-201ENST00000317233 LRRC19Q9H756 370 aa12.65□□□□□ -0.38
AFF3-201ENST00000317233 HRASLSQ9HDD0 168 aa12.65□□□□□ -0.38
AFF3-201ENST00000317233 MAFBQ9Y5Q3 323 aaPredicted RBP12.65□□□□□ -0.38
AFF3-201ENST00000317233 IRAK2O43187 625 aa12.65□□□□□ -0.38
AFF3-201ENST00000317233 SLITRK5O94991 958 aa12.65□□□□□ -0.38
AFF3-201ENST00000317233 PLA2G7Q13093 441 aa12.65□□□□□ -0.38
AFF3-201ENST00000317233 ARL6IP1Q15041 203 aa12.65□□□□□ -0.38
AFF3-201ENST00000317233 CCDC71Q8IV32 467 aaPredicted RBP12.65□□□□□ -0.38
AFF3-201ENST00000317233 FAM83FQ8NEG4 500 aaPredicted RBP12.65□□□□□ -0.38
AFF3-201ENST00000317233 STEAP2Q8NFT2 490 aa12.65□□□□□ -0.38
AFF3-201ENST00000317233 DCUN1D4Q92564 292 aa12.65□□□□□ -0.38
AFF3-201ENST00000317233 UBL7Q96S82 380 aaPredicted RBP12.65□□□□□ -0.38
AFF3-201ENST00000317233 ASF1BQ9NVP2 202 aa12.65□□□□□ -0.38
AFF3-201ENST00000317233 TESQ9UGI8 421 aaKnown RBP12.65□□□□□ -0.38
AFF3-201ENST00000317233 PUS1Q9Y606 427 aaKnown RBP eCLIP12.65□□□□□ -0.38
AFF3-201ENST00000317233 SMIM30A4D0T7 59 aa12.64□□□□□ -0.39
AFF3-201ENST00000317233 TMEM88BA6NKF7 163 aa12.64□□□□□ -0.39
AFF3-201ENST00000317233 SULT1C2O00338 296 aa12.64□□□□□ -0.39
AFF3-201ENST00000317233 BRCC3P46736 316 aa12.64□□□□□ -0.39
AFF3-201ENST00000317233 HERVK_113P63132 956 aa12.64□□□□□ -0.39
AFF3-201ENST00000317233 NKX3-2P78367 333 aa12.64□□□□□ -0.39
AFF3-201ENST00000317233 CDK6Q00534 326 aa12.64□□□□□ -0.39
AFF3-201ENST00000317233 KLF1Q13351 362 aaPredicted RBP12.64□□□□□ -0.39
AFF3-201ENST00000317233 MSMO1Q15800 293 aa12.64□□□□□ -0.39
AFF3-201ENST00000317233 MEX3BQ6ZN04 569 aaKnown RBP12.64□□□□□ -0.39
AFF3-201ENST00000317233 EPS8L1Q8TE68 723 aa12.64□□□□□ -0.39
AFF3-201ENST00000317233 ERVK-6Q9BXR3 956 aa12.64□□□□□ -0.39
AFF3-201ENST00000317233 DECR2Q9NUI1 292 aa12.64□□□□□ -0.39
AFF3-201ENST00000317233 EXTL2Q9UBQ6 330 aa12.64□□□□□ -0.39
AFF3-201ENST00000317233 PTBP2Q9UKA9 531 aaKnown RBP12.64□□□□□ -0.39
AFF3-201ENST00000317233 SOCS2O14508 198 aa12.64□□□□□ -0.39
AFF3-201ENST00000317233 GSTP1P09211 210 aaKnown RBP12.64□□□□□ -0.39
AFF3-201ENST00000317233 FLT3LGP49771 235 aa12.64□□□□□ -0.39
AFF3-201ENST00000317233 DUOXA1Q1HG43 343 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms