RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 ZNF843Q8N446 348 aa10.23□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 TMEM156Q8N614 296 aa10.23□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 HORMAD2Q8N7B1 307 aa10.23□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 RBMXL3Q8N7X1 1067 aaKnown RBP10.23□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 OR8K3Q8NH51 312 aa10.23□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 ZFP28Q8NHY6 868 aa10.23□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 DOK4Q8TEW6 326 aa10.23□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 PNPLA2Q96AD5 504 aa10.23□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 PPCDCQ96CD2 204 aa10.23□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 CNRIP1Q96F85 164 aaPredicted RBP10.23□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 MAGEB18Q96M61 343 aa10.23□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 C7orf26Q96N11 449 aa10.23□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 GAL3ST4Q96RP7 486 aa10.23□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 REEP4Q9H6H4 257 aa10.23□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 AKTIPQ9H8T0 292 aa10.23□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 CXorf21Q9HAI6 301 aa10.23□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 ZBTB20Q9HC78 741 aaPredicted RBP10.23□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 SH3BP4Q9P0V3 963 aa10.23□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 ZNF223Q9UK11 482 aaPredicted RBP10.23□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 MAPRE3Q9UPY8 281 aa10.23□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 CFL2Q9Y281 166 aa10.23□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 EML6Q6ZMW3 1958 aa10.23□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 TRAV17A0A0B4J275 112 aa10.22□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 PRAMEF2O60811 474 aa10.22□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 ITGA10O75578 1167 aa10.22□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 BCAS2O75934 225 aaPredicted RBP10.22□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 C1QL1O75973 258 aa10.22□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 SLITRK5O94991 958 aa10.22□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 F10P00742 488 aa10.22□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 GPC1P35052 558 aa10.22□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 CD97P48960 835 aa10.22□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 SSR4P51571 173 aa10.22□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 GPR143P51810 404 aa10.22□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 MLF1P58340 268 aa10.22□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 RNF4P78317 190 aa10.22□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 EMX2Q04743 252 aa10.22□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 ZNF169Q14929 603 aaPredicted RBP10.22□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 LTB4RQ15722 352 aa10.22□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 PRICKLE4Q2TBC4 344 aa10.22□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 NXNQ6DKJ4 435 aa10.22□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 DGAT2L6Q6ZPD8 337 aa10.22□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 CCDC116Q8IYX3 515 aa10.22□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 AMER2Q8N7J2 671 aa10.22□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 ZNF321PQ8N8H1 164 aa10.22□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 ADCY4Q8NFM4 1077 aa10.22□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 OR7G1Q8NGA0 311 aa10.22□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 NUBPLQ8TB37 319 aa10.22□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 SLC22A8Q8TCC7 542 aa10.22□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 ZNF675Q8TD23 568 aa10.22□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 CKAP2Q8WWK9 683 aa10.22□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 ASB15Q8WXK1 588 aa10.22□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 HAS2Q92819 552 aa10.22□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 MTERF3Q96E29 417 aa10.22□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 ZNF764Q96H86 408 aaPredicted RBP10.22□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 EGLN2Q96KS0 407 aa10.22□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 PRPF18Q99633 342 aaKnown RBP10.22□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 ATAD3AQ9NVI7 634 aa10.22□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 PLA2G3Q9NZ20 509 aa10.22□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 MAT2BQ9NZL9 334 aa10.22□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 LUZP4Q9P127 313 aa10.22□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 MAP10Q9P2G4 905 aa10.22□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 BCAP29Q9UHQ4 241 aa10.22□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 BAIAP2L1Q9UHR4 511 aa10.22□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 YARS2Q9Y2Z4 477 aaKnown RBP10.22□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 CNTRLQ7Z7A1 2325 aa10.22□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 GOLGA8QA0A0J9YX86 632 aa10.21□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 C2orf92A0A1B0GVN3 265 aa10.21□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 GOLGA8OA6NCC3 632 aa10.21□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 TTLL8A6PVC2 850 aa10.21□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 A8MVJ9 347 aa10.21□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 GOLGA8NF8WBI6 632 aa10.21□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 HRKO00198 91 aa10.21□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 WWP2O00308 870 aa10.21□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 SCAMP2O15127 329 aaKnown RBP10.21□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 SLC28A2O43868 658 aa10.21□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 PRKNO60260 465 aaPredicted RBP10.21□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 COQ9O75208 318 aa10.21□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 IGKV3-11P04433 115 aa10.21□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 CT62P0C5K7 136 aa10.21□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 CD46P15529 392 aa10.21□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 PRPS1L1P21108 318 aa10.21□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 SSTR4P31391 388 aa10.21□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 CYB561P49447 251 aa10.21□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 SLC37A1P57057 533 aa10.21□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 FUT7Q11130 342 aa10.21□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 MAP4K2Q12851 820 aa10.21□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 HSPB3Q12988 150 aa10.21□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 TUBA3CQ13748 450 aa10.21□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 PTGR1Q14914 329 aa10.21□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 CEBPEQ15744 281 aa10.21□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 COLEC12Q5KU26 742 aa10.21□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 ANKRD26P1Q6NSI1 321 aa10.21□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 TUBA3EQ6PEY2 450 aa10.21□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 Q6ZS92 163 aa10.21□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 ACAD11Q709F0 780 aa10.21□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 C9orf40Q8IXQ3 194 aa10.21□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 OR9A2Q8NGT5 310 aa10.21□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.21□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 TMEM125Q96AQ2 219 aa10.21□□□□□ -0.77
CSPG4P1Y-201ENST00000306641 ZBED6CLQ96FA7 236 aaPredicted RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms