RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 FARS2O95363 451 aaKnown RBP7.31□□□□□ -1.24
SF3B3-201ENST00000302516 TFPTP0C1Z6 253 aa7.31□□□□□ -1.24
SF3B3-201ENST00000302516 GJA1P17302 382 aa7.31□□□□□ -1.24
SF3B3-201ENST00000302516 ARSIQ5FYB1 569 aa7.31□□□□□ -1.24
SF3B3-201ENST00000302516 LAS2Q8IYD9 372 aa7.31□□□□□ -1.24
SF3B3-201ENST00000302516 SFXN5Q8TD22 340 aa7.31□□□□□ -1.24
SF3B3-201ENST00000302516 ARMC5Q96C12 935 aa7.31□□□□□ -1.24
SF3B3-201ENST00000302516 CNTNAP3BQ96NU0 1288 aa7.31□□□□□ -1.24
SF3B3-201ENST00000302516 SLC2A13Q96QE2 648 aa7.31□□□□□ -1.24
SF3B3-201ENST00000302516 SLC6A7Q99884 636 aa7.31□□□□□ -1.24
SF3B3-201ENST00000302516 MYOCQ99972 504 aa7.31□□□□□ -1.24
SF3B3-201ENST00000302516 C19orf12Q9NSK7 152 aa7.31□□□□□ -1.24
SF3B3-201ENST00000302516 HSBP1L1C9JCN9 74 aa7.31□□□□□ -1.24
SF3B3-201ENST00000302516 LYRM1O43325 122 aa7.31□□□□□ -1.24
SF3B3-201ENST00000302516 LATO43561 262 aa7.31□□□□□ -1.24
SF3B3-201ENST00000302516 KCNJ13O60928 360 aa7.31□□□□□ -1.24
SF3B3-201ENST00000302516 STT3AP46977 705 aa7.31□□□□□ -1.24
SF3B3-201ENST00000302516 GCGRP47871 477 aa7.31□□□□□ -1.24
SF3B3-201ENST00000302516 RIDAP52758 137 aaKnown RBP7.31□□□□□ -1.24
SF3B3-201ENST00000302516 SNTB2Q13425 540 aaKnown RBP7.31□□□□□ -1.24
SF3B3-201ENST00000302516 OR52E8Q6IFG1 317 aa7.31□□□□□ -1.24
SF3B3-201ENST00000302516 TMEM135Q86UB9 458 aa7.31□□□□□ -1.24
SF3B3-201ENST00000302516 PAPD5Q8NDF8 572 aaKnown RBP7.31□□□□□ -1.24
SF3B3-201ENST00000302516 TERB2Q8NHR7 220 aa7.31□□□□□ -1.24
SF3B3-201ENST00000302516 VNN3Q9NY84 501 aa7.31□□□□□ -1.24
SF3B3-201ENST00000302516 FAM230AA0A1W2PPH8 454 aa7.31□□□□□ -1.24
SF3B3-201ENST00000302516 MEGF11A6BM72 1044 aa7.31□□□□□ -1.24
SF3B3-201ENST00000302516 VEGFDO43915 354 aa7.31□□□□□ -1.24
SF3B3-201ENST00000302516 WNT4P56705 351 aa7.31□□□□□ -1.24
SF3B3-201ENST00000302516 KRTCAP2Q8N6L1 136 aa7.31□□□□□ -1.24
SF3B3-201ENST00000302516 TFGQ92734 400 aaPredicted RBP7.31□□□□□ -1.24
SF3B3-201ENST00000302516 COQ10AQ96MF6 247 aa7.31□□□□□ -1.24
SF3B3-201ENST00000302516 PITHD1Q9GZP4 211 aaPredicted RBP7.31□□□□□ -1.24
SF3B3-201ENST00000302516 METTL7AQ9H8H3 244 aa7.31□□□□□ -1.24
SF3B3-201ENST00000302516 SEC61A2Q9H9S3 476 aa7.31□□□□□ -1.24
SF3B3-201ENST00000302516 ZNF334Q9HCZ1 680 aaPredicted RBP7.31□□□□□ -1.24
SF3B3-201ENST00000302516 CRYBG1Q9Y4K1 1723 aa7.31□□□□□ -1.24
SF3B3-201ENST00000302516 PSAT1Q9Y617 370 aa7.31□□□□□ -1.24
SF3B3-201ENST00000302516 TFP02787 698 aa7.31□□□□□ -1.24
SF3B3-201ENST00000302516 UGT2B7P16662 529 aa7.31□□□□□ -1.24
SF3B3-201ENST00000302516 TUBG1P23258 451 aa7.31□□□□□ -1.24
SF3B3-201ENST00000302516 CAMLGP49069 296 aa7.31□□□□□ -1.24
SF3B3-201ENST00000302516 FNTBP49356 437 aa7.31□□□□□ -1.24
SF3B3-201ENST00000302516 RPP30P78346 268 aaKnown RBP7.31□□□□□ -1.24
SF3B3-201ENST00000302516 UMODL1-AS1Q8N2C9 162 aa7.31□□□□□ -1.24
SF3B3-201ENST00000302516 SLC15A4Q8N697 577 aa7.31□□□□□ -1.24
SF3B3-201ENST00000302516 TEX26Q8N6G2 289 aa7.31□□□□□ -1.24
SF3B3-201ENST00000302516 LRR1Q96L50 414 aa7.31□□□□□ -1.24
SF3B3-201ENST00000302516 PPIL3Q9H2H8 161 aaKnown RBP7.31□□□□□ -1.24
SF3B3-201ENST00000302516 KLRG2A4D1S0 409 aaPredicted RBP7.31□□□□□ -1.24
SF3B3-201ENST00000302516 CDHR4A6H8M9 788 aa7.31□□□□□ -1.24
SF3B3-201ENST00000302516 F5H5P2 479 aa7.31□□□□□ -1.24
SF3B3-201ENST00000302516 ACOT7O00154 380 aa7.31□□□□□ -1.24
SF3B3-201ENST00000302516 TP53I11O14683 189 aa7.31□□□□□ -1.24
SF3B3-201ENST00000302516 PRAMEF2O60811 474 aa7.31□□□□□ -1.24
SF3B3-201ENST00000302516 IFNA10P01566 189 aa7.31□□□□□ -1.24
SF3B3-201ENST00000302516 ALPIP09923 528 aa7.31□□□□□ -1.24
SF3B3-201ENST00000302516 ACP5P13686 325 aa7.31□□□□□ -1.24
SF3B3-201ENST00000302516 CHATP28329 748 aa7.31□□□□□ -1.24
SF3B3-201ENST00000302516 PRMT2P55345 433 aa7.31□□□□□ -1.24
SF3B3-201ENST00000302516 RPS24P62847 133 aaKnown RBP7.31□□□□□ -1.24
SF3B3-201ENST00000302516 PTPRRQ15256 657 aa7.31□□□□□ -1.24
SF3B3-201ENST00000302516 MICAQ29983 383 aa7.31□□□□□ -1.24
SF3B3-201ENST00000302516 TMPRSS12Q86WS5 348 aa7.31□□□□□ -1.24
SF3B3-201ENST00000302516 KREMEN2Q8NCW0 462 aa7.31□□□□□ -1.24
SF3B3-201ENST00000302516 ABHD11Q8NFV4 315 aa7.31□□□□□ -1.24
SF3B3-201ENST00000302516 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.31□□□□□ -1.244e-13■■■□□ 19
SF3B3-201ENST00000302516 CASTOR1Q8WTX7 329 aa7.31□□□□□ -1.24
SF3B3-201ENST00000302516 CACNG6Q9BXT2 260 aa7.31□□□□□ -1.24
SF3B3-201ENST00000302516 CNOT2Q9NZN8 540 aaKnown RBP7.31□□□□□ -1.24
SF3B3-201ENST00000302516 IRS2Q9Y4H2 1338 aa7.31□□□□□ -1.24
SF3B3-201ENST00000302516 ARID1BQ8NFD5 2236 aaPredicted RBP7.31□□□□□ -1.24
SF3B3-201ENST00000302516 A8MV72 311 aaPredicted RBP7.31□□□□□ -1.24
SF3B3-201ENST00000302516 MUSKO15146 869 aa7.31□□□□□ -1.24
SF3B3-201ENST00000302516 RDH16O75452 317 aa7.31□□□□□ -1.24
SF3B3-201ENST00000302516 ARL3P36405 182 aa7.31□□□□□ -1.24
SF3B3-201ENST00000302516 PRPS1P60891 318 aa7.31□□□□□ -1.24
SF3B3-201ENST00000302516 PHOSPHO1Q8TCT1 267 aa7.31□□□□□ -1.24
SF3B3-201ENST00000302516 SH3RF2Q8TEC5 729 aa7.31□□□□□ -1.24
SF3B3-201ENST00000302516 P2RY13Q9BPV8 354 aa7.31□□□□□ -1.24
SF3B3-201ENST00000302516 DPCDQ9BVM2 203 aaPredicted RBP7.31□□□□□ -1.24
SF3B3-201ENST00000302516 SARDHQ9UL12 918 aa7.31□□□□□ -1.24
SF3B3-201ENST00000302516 DOCK2Q92608 1830 aa7.31□□□□□ -1.24
SF3B3-201ENST00000302516 CASC3O15234 703 aaKnown RBP7.31□□□□□ -1.24
SF3B3-201ENST00000302516 P2RX6O15547 441 aa7.31□□□□□ -1.24
SF3B3-201ENST00000302516 NKX6-1P78426 367 aaPredicted RBP7.31□□□□□ -1.24
SF3B3-201ENST00000302516 CAMK2DQ13557 499 aa7.31□□□□□ -1.24
SF3B3-201ENST00000302516 SGCBQ16585 318 aa7.31□□□□□ -1.24
SF3B3-201ENST00000302516 ENPP6Q6UWR7 440 aa7.31□□□□□ -1.24
SF3B3-201ENST00000302516 SERPINA11Q86U17 422 aa7.31□□□□□ -1.24
SF3B3-201ENST00000302516 OR1J4Q8NGS1 313 aa7.31□□□□□ -1.24
SF3B3-201ENST00000302516 PRRT1Q99946 306 aa7.31□□□□□ -1.24
SF3B3-201ENST00000302516 GON7Q9BXV9 100 aa7.31□□□□□ -1.24
SF3B3-201ENST00000302516 SCN4AP35499 1836 aa7.3□□□□□ -1.24
SF3B3-201ENST00000302516 C17orf113A0A1B0GUU1 675 aa7.3□□□□□ -1.24
SF3B3-201ENST00000302516 RAB19A4D1S5 217 aa7.3□□□□□ -1.24
SF3B3-201ENST00000302516 BLACEA4D250 179 aa7.3□□□□□ -1.24
SF3B3-201ENST00000302516 BOLA2-SMG1P6H3BVE0 249 aa7.3□□□□□ -1.24
SF3B3-201ENST00000302516 SEC14L2O76054 403 aa7.3□□□□□ -1.24
SF3B3-201ENST00000302516 APBB3O95704 486 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms