RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 SBK3P0C264 359 aa23.22■■□□□ 1.31
U2AF1-201ENST00000291552 CT62P0C5K7 136 aa23.22■■□□□ 1.31
U2AF1-201ENST00000291552 SLC35E2P0CK97 266 aa23.22■■□□□ 1.31
U2AF1-201ENST00000291552 ACVR2AP27037 513 aa23.22■■□□□ 1.31
U2AF1-201ENST00000291552 GALNSP34059 522 aa23.22■■□□□ 1.31
U2AF1-201ENST00000291552 ZNF585AQ6P3V2 769 aa23.22■■□□□ 1.31
U2AF1-201ENST00000291552 TMEM64Q6YI46 380 aa23.22■■□□□ 1.31
U2AF1-201ENST00000291552 SLC29A4Q7RTT9 530 aa23.22■■□□□ 1.31
U2AF1-201ENST00000291552 MRPL1Q9BYD6 325 aaKnown RBP23.22■■□□□ 1.31
U2AF1-201ENST00000291552 CXorf21Q9HAI6 301 aa23.22■■□□□ 1.31
U2AF1-201ENST00000291552 MED12Q93074 2177 aa23.21■■□□□ 1.31
U2AF1-201ENST00000291552 OR6C76A6NM76 312 aa23.21■■□□□ 1.31
U2AF1-201ENST00000291552 SUSD5O60279 629 aa23.21■■□□□ 1.31
U2AF1-201ENST00000291552 ARL1P40616 181 aaPredicted RBP23.21■■□□□ 1.31
U2AF1-201ENST00000291552 MAN2A2P49641 1150 aa23.21■■□□□ 1.31
U2AF1-201ENST00000291552 TLE4Q04727 773 aa23.21■■□□□ 1.31
U2AF1-201ENST00000291552 NTRK2Q16620 822 aa23.21■■□□□ 1.31
U2AF1-201ENST00000291552 GGTA1PQ4G0N0 100 aa23.21■■□□□ 1.31
U2AF1-201ENST00000291552 TMEM151AQ8N4L1 468 aa23.21■■□□□ 1.31
U2AF1-201ENST00000291552 FAM13CQ8NE31 585 aa23.21■■□□□ 1.31
U2AF1-201ENST00000291552 UHMK1Q8TAS1 419 aaKnown RBP23.21■■□□□ 1.31
U2AF1-201ENST00000291552 ATP6V1E2Q96A05 226 aa23.21■■□□□ 1.31
U2AF1-201ENST00000291552 FMO2Q99518 471 aa23.21■■□□□ 1.31
U2AF1-201ENST00000291552 TTYH2Q9BSA4 534 aa23.21■■□□□ 1.31
U2AF1-201ENST00000291552 WDR41Q9HAD4 459 aa23.21■■□□□ 1.31
U2AF1-201ENST00000291552 ZFP64Q9NPA5 681 aa23.21■■□□□ 1.31
U2AF1-201ENST00000291552 TRIM49D1C9J1S8 452 aa23.2■■□□□ 1.3
U2AF1-201ENST00000291552 PPP6CO00743 305 aa23.2■■□□□ 1.3
U2AF1-201ENST00000291552 GLI4P10075 376 aa23.2■■□□□ 1.3
U2AF1-201ENST00000291552 MSX1P28360 303 aa23.2■■□□□ 1.3
U2AF1-201ENST00000291552 SERPINB9P50453 376 aa23.2■■□□□ 1.3
U2AF1-201ENST00000291552 KCNJ2P63252 427 aa23.2■■□□□ 1.3
U2AF1-201ENST00000291552 SLC10A1Q14973 349 aa23.2■■□□□ 1.3
U2AF1-201ENST00000291552 ACAD11Q709F0 780 aa23.2■■□□□ 1.3
U2AF1-201ENST00000291552 LRRC25Q8N386 305 aaPredicted RBP23.2■■□□□ 1.3
U2AF1-201ENST00000291552 OR4F6Q8NGB9 312 aa23.2■■□□□ 1.3
U2AF1-201ENST00000291552 ZNF483Q8TF39 744 aaPredicted RBP23.2■■□□□ 1.3
U2AF1-201ENST00000291552 FARSBQ9NSD9 589 aaKnown RBP23.2■■□□□ 1.3
U2AF1-201ENST00000291552 TMCO1Q9UM00 188 aa23.2■■□□□ 1.3
U2AF1-201ENST00000291552 FIGNL2A6NMB9 653 aa23.19■■□□□ 1.3
U2AF1-201ENST00000291552 HCN1O60741 890 aa23.19■■□□□ 1.3
U2AF1-201ENST00000291552 SMIM24O75264 130 aa23.19■■□□□ 1.3
U2AF1-201ENST00000291552 KLK1P06870 262 aa23.19■■□□□ 1.3
U2AF1-201ENST00000291552 FUT7Q11130 342 aa23.19■■□□□ 1.3
U2AF1-201ENST00000291552 TSNAXIP1Q2TAA8 658 aa23.19■■□□□ 1.3
U2AF1-201ENST00000291552 BICRALQ6AI39 1079 aa23.19■■□□□ 1.3
U2AF1-201ENST00000291552 LETMD1Q6P1Q0 360 aa23.19■■□□□ 1.3
U2AF1-201ENST00000291552 B3GNT6Q6ZMB0 384 aa23.19■■□□□ 1.3
U2AF1-201ENST00000291552 GALNT12Q8IXK2 581 aa23.19■■□□□ 1.3
U2AF1-201ENST00000291552 DND1Q8IYX4 353 aaKnown RBP23.19■■□□□ 1.3
U2AF1-201ENST00000291552 MMP21Q8N119 569 aa23.19■■□□□ 1.3
U2AF1-201ENST00000291552 METTL4Q8N3J2 472 aa23.19■■□□□ 1.3
U2AF1-201ENST00000291552 ZNF615Q8N8J6 731 aa23.19■■□□□ 1.3
U2AF1-201ENST00000291552 CHTF18Q8WVB6 975 aa23.19■■□□□ 1.3
U2AF1-201ENST00000291552 IFT81Q8WYA0 676 aa23.19■■□□□ 1.3
U2AF1-201ENST00000291552 SLC6A15Q9H2J7 730 aa23.19■■□□□ 1.3
U2AF1-201ENST00000291552 CNIH4Q9P003 139 aa23.19■■□□□ 1.3
U2AF1-201ENST00000291552 ZNF180Q9UJW8 692 aa23.19■■□□□ 1.3
U2AF1-201ENST00000291552 ZNF225Q9UK10 706 aa23.19■■□□□ 1.3
U2AF1-201ENST00000291552 ADAM29Q9UKF5 820 aa23.19■■□□□ 1.3
U2AF1-201ENST00000291552 BOKQ9UMX3 212 aaPredicted RBP23.19■■□□□ 1.3
U2AF1-201ENST00000291552 KIAA1549Q9HCM3 1950 aa23.19■■□□□ 1.3
U2AF1-201ENST00000291552 ANKHD1Q8IWZ3 2542 aaKnown RBP23.19■■□□□ 1.3
U2AF1-201ENST00000291552 TRGV5A0A0B4J1U4 118 aa23.18■■□□□ 1.3
U2AF1-201ENST00000291552 A8MT66 165 aa23.18■■□□□ 1.3
U2AF1-201ENST00000291552 POC1B-GALNT4F8VUJ3 575 aa23.18■■□□□ 1.3
U2AF1-201ENST00000291552 COL6A2P12110 1019 aa23.18■■□□□ 1.3
U2AF1-201ENST00000291552 TSPAN8P19075 237 aa23.18■■□□□ 1.3
U2AF1-201ENST00000291552 PIK3R1P27986 724 aa23.18■■□□□ 1.3
U2AF1-201ENST00000291552 SERPINB3P29508 390 aa23.18■■□□□ 1.3
U2AF1-201ENST00000291552 ADH7P40394 386 aa23.18■■□□□ 1.3
U2AF1-201ENST00000291552 SGO1Q5FBB7 561 aa23.18■■□□□ 1.3
U2AF1-201ENST00000291552 COMMD6Q7Z4G1 85 aa23.18■■□□□ 1.3
U2AF1-201ENST00000291552 MRPL57Q9BQC6 102 aaKnown RBP23.18■■□□□ 1.3
U2AF1-201ENST00000291552 MRPL46Q9H2W6 279 aaKnown RBP23.18■■□□□ 1.3
U2AF1-201ENST00000291552 LDAHQ9H6V9 325 aa23.18■■□□□ 1.3
U2AF1-201ENST00000291552 MCCC2Q9HCC0 563 aa23.18■■□□□ 1.3
U2AF1-201ENST00000291552 KCNJ16Q9NPI9 418 aa23.18■■□□□ 1.3
U2AF1-201ENST00000291552 MED13LQ71F56 2210 aa23.18■■□□□ 1.3
U2AF1-201ENST00000291552 A0A0G2JNJ9 132 aa23.17■■□□□ 1.3
U2AF1-201ENST00000291552 C2orf92A0A1B0GVN3 265 aa23.17■■□□□ 1.3
U2AF1-201ENST00000291552 TRIM3O75382 744 aaPredicted RBP23.17■■□□□ 1.3
U2AF1-201ENST00000291552 KRT38O76015 456 aa23.17■■□□□ 1.3
U2AF1-201ENST00000291552 S1PR1P21453 382 aa23.17■■□□□ 1.3
U2AF1-201ENST00000291552 CDH13P55290 713 aa23.17■■□□□ 1.3
U2AF1-201ENST00000291552 FBXW4P57775 412 aa23.17■■□□□ 1.3
U2AF1-201ENST00000291552 GALNT1Q10472 559 aaPredicted RBP23.17■■□□□ 1.3
U2AF1-201ENST00000291552 IFT88Q13099 833 aa23.17■■□□□ 1.3
U2AF1-201ENST00000291552 TTC19Q6DKK2 380 aaPredicted RBP23.17■■□□□ 1.3
U2AF1-201ENST00000291552 TAOK1Q7L7X3 1001 aa23.17■■□□□ 1.3
U2AF1-201ENST00000291552 MILR1Q7Z6M3 343 aa23.17■■□□□ 1.3
U2AF1-201ENST00000291552 OR4K14Q8NGD5 310 aa23.17■■□□□ 1.3
U2AF1-201ENST00000291552 ADIPOR1Q96A54 375 aa23.17■■□□□ 1.3
U2AF1-201ENST00000291552 SARAFQ96BY9 339 aa23.17■■□□□ 1.3
U2AF1-201ENST00000291552 TSPYL1Q9H0U9 437 aa23.17■■□□□ 1.3
U2AF1-201ENST00000291552 Q9UFV3 132 aa23.17■■□□□ 1.3
U2AF1-201ENST00000291552 ACAD8Q9UKU7 415 aa23.17■■□□□ 1.3
U2AF1-201ENST00000291552 CES1P1Q9UKY3 287 aa23.17■■□□□ 1.3
U2AF1-201ENST00000291552 DTX4Q9Y2E6 619 aa23.17■■□□□ 1.3
U2AF1-201ENST00000291552 AKAP6Q13023 2319 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms