RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 CCINQ13939 588 aa18.2■□□□□ 0.5
BRAF-201ENST00000288602 DGCR6Q14129 220 aa18.2■□□□□ 0.5
BRAF-201ENST00000288602 PROX2Q3B8N5 592 aa18.2■□□□□ 0.5
BRAF-201ENST00000288602 LEXMQ3ZCV2 418 aa18.2■□□□□ 0.5
BRAF-201ENST00000288602 TCTN3Q6NUS6 607 aa18.2■□□□□ 0.5
BRAF-201ENST00000288602 SLC48A1Q6P1K1 146 aa18.2■□□□□ 0.5
BRAF-201ENST00000288602 ZNF761Q86XN6 746 aaPredicted RBP18.2■□□□□ 0.5
BRAF-201ENST00000288602 CCDC103Q8IW40 242 aa18.2■□□□□ 0.5
BRAF-201ENST00000288602 OR9A2Q8NGT5 310 aa18.2■□□□□ 0.5
BRAF-201ENST00000288602 OR2A14Q96R47 310 aa18.2■□□□□ 0.5
BRAF-201ENST00000288602 TIMMDC1Q9NPL8 285 aa18.2■□□□□ 0.5
BRAF-201ENST00000288602 TMEM74BQ9NUR3 256 aa18.2■□□□□ 0.5
BRAF-201ENST00000288602 C2orf42Q9NWW7 574 aa18.2■□□□□ 0.5
BRAF-201ENST00000288602 P2RX2Q9UBL9 471 aa18.2■□□□□ 0.5
BRAF-201ENST00000288602 ZNF99A8MXY4 864 aaPredicted RBP18.19■□□□□ 0.5
BRAF-201ENST00000288602 P2RX6O15547 441 aa18.19■□□□□ 0.5
BRAF-201ENST00000288602 TPST2O60704 377 aa18.19■□□□□ 0.5
BRAF-201ENST00000288602 CCNA2P20248 432 aa18.19■□□□□ 0.5
BRAF-201ENST00000288602 AKT2P31751 481 aa18.19■□□□□ 0.5
BRAF-201ENST00000288602 MC3RP41968 323 aa18.19■□□□□ 0.5
BRAF-201ENST00000288602 NUDT6P53370 316 aa18.19■□□□□ 0.5
BRAF-201ENST00000288602 TMBIM6P55061 237 aa18.19■□□□□ 0.5
BRAF-201ENST00000288602 NFATC3Q12968 1075 aa18.19■□□□□ 0.5
BRAF-201ENST00000288602 TUBA3CQ13748 450 aa18.19■□□□□ 0.5
BRAF-201ENST00000288602 LTB4RQ15722 352 aa18.19■□□□□ 0.5
BRAF-201ENST00000288602 GAB3Q8WWW8 586 aa18.19■□□□□ 0.5
BRAF-201ENST00000288602 FAM3CQ92520 227 aa18.19■□□□□ 0.5
BRAF-201ENST00000288602 KAT2AQ92830 837 aa18.19■□□□□ 0.5
BRAF-201ENST00000288602 FKBP10Q96AY3 582 aa18.19■□□□□ 0.5
BRAF-201ENST00000288602 NMNAT1Q9HAN9 279 aaPredicted RBP18.19■□□□□ 0.5
BRAF-201ENST00000288602 PCOLCE2Q9UKZ9 415 aa18.19■□□□□ 0.5
BRAF-201ENST00000288602 MMP17Q9ULZ9 603 aa18.19■□□□□ 0.5
BRAF-201ENST00000288602 CYP8B1Q9UNU6 501 aa18.19■□□□□ 0.5
BRAF-201ENST00000288602 ENTPD4Q9Y227 616 aa18.19■□□□□ 0.5
BRAF-201ENST00000288602 POFUT2Q9Y2G5 429 aa18.19■□□□□ 0.5
BRAF-201ENST00000288602 HCN4Q9Y3Q4 1203 aa18.19■□□□□ 0.5
BRAF-201ENST00000288602 M0R3H8 397 aa18.18■□□□□ 0.5
BRAF-201ENST00000288602 NDUFS2O75306 463 aa18.18■□□□□ 0.5
BRAF-201ENST00000288602 PVRP15151 417 aa18.18■□□□□ 0.5
BRAF-201ENST00000288602 UGT2B7P16662 529 aa18.18■□□□□ 0.5
BRAF-201ENST00000288602 ITIH1P19827 911 aa18.18■□□□□ 0.5
BRAF-201ENST00000288602 NDUFS1P28331 727 aa18.18■□□□□ 0.5
BRAF-201ENST00000288602 GGT2P36268 569 aa18.18■□□□□ 0.5
BRAF-201ENST00000288602 RANBP1P43487 201 aa18.18■□□□□ 0.5
BRAF-201ENST00000288602 HMGA2P52926 109 aa18.18■□□□□ 0.5
BRAF-201ENST00000288602 STXBP1P61764 594 aaKnown RBP18.18■□□□□ 0.5
BRAF-201ENST00000288602 MVKQ03426 396 aa18.18■□□□□ 0.5
BRAF-201ENST00000288602 SEC23BQ15437 767 aa18.18■□□□□ 0.5
BRAF-201ENST00000288602 TRIM48Q8IWZ4 208 aa18.18■□□□□ 0.5
BRAF-201ENST00000288602 TMEFF1Q8IYR6 380 aa18.18■□□□□ 0.5
BRAF-201ENST00000288602 THAP11Q96EK4 314 aa18.18■□□□□ 0.5
BRAF-201ENST00000288602 CNDP2Q96KP4 475 aaKnown RBP18.18■□□□□ 0.5
BRAF-201ENST00000288602 ZNF556Q9HAH1 456 aa18.18■□□□□ 0.5
BRAF-201ENST00000288602 SELENONQ9NZV5 590 aa18.18■□□□□ 0.5
BRAF-201ENST00000288602 SLCO1B1Q9Y6L6 691 aa18.18■□□□□ 0.5
BRAF-201ENST00000288602 LOC105369274A0A096LPK9 316 aa18.18■□□□□ 0.5
BRAF-201ENST00000288602 LOC102723532A0A0G2JNH3 316 aa18.18■□□□□ 0.5
BRAF-201ENST00000288602 KCNJ5P48544 419 aa18.18■□□□□ 0.5
BRAF-201ENST00000288602 CXCR4P61073 352 aa18.18■□□□□ 0.5
BRAF-201ENST00000288602 OLR1P78380 273 aa18.18■□□□□ 0.5
BRAF-201ENST00000288602 FUT5Q11128 374 aa18.18■□□□□ 0.5
BRAF-201ENST00000288602 DEFB134Q4QY38 66 aa18.18■□□□□ 0.5
BRAF-201ENST00000288602 ASPGQ86U10 573 aa18.18■□□□□ 0.5
BRAF-201ENST00000288602 OR4N5Q8IXE1 308 aa18.18■□□□□ 0.5
BRAF-201ENST00000288602 TDHQ8IZJ6 230 aa18.18■□□□□ 0.5
BRAF-201ENST00000288602 OR4N4Q8N0Y3 316 aa18.18■□□□□ 0.5
BRAF-201ENST00000288602 COL26A1Q96A83 441 aa18.18■□□□□ 0.5
BRAF-201ENST00000288602 DTNBP1Q96EV8 351 aa18.18■□□□□ 0.5
BRAF-201ENST00000288602 ZNF607Q96SK3 696 aa18.18■□□□□ 0.5
BRAF-201ENST00000288602 CTPS2Q9NRF8 586 aa18.18■□□□□ 0.5
BRAF-201ENST00000288602 TMEM247A6NEH6 219 aa18.17■□□□□ 0.5
BRAF-201ENST00000288602 IGHV4-34P06331 123 aa18.17■□□□□ 0.5
BRAF-201ENST00000288602 CHRM4P08173 479 aa18.17■□□□□ 0.5
BRAF-201ENST00000288602 POU1F1P28069 291 aa18.17■□□□□ 0.5
BRAF-201ENST00000288602 AQP6Q13520 282 aa18.17■□□□□ 0.5
BRAF-201ENST00000288602 PIN1Q13526 163 aaPredicted RBP18.17■□□□□ 0.5
BRAF-201ENST00000288602 FRMPD2BQ6IN97 320 aa18.17■□□□□ 0.5
BRAF-201ENST00000288602 KLHL17Q6TDP4 642 aa18.17■□□□□ 0.5
BRAF-201ENST00000288602 SLC16A12Q6ZSM3 486 aa18.17■□□□□ 0.5
BRAF-201ENST00000288602 P3H2Q8IVL5 708 aa18.17■□□□□ 0.5
BRAF-201ENST00000288602 DOK4Q8TEW6 326 aa18.17■□□□□ 0.5
BRAF-201ENST00000288602 TANKQ92844 425 aa18.17■□□□□ 0.5
BRAF-201ENST00000288602 ZNF354BQ96LW1 612 aa18.17■□□□□ 0.5
BRAF-201ENST00000288602 RGS10O43665 173 aa18.17■□□□□ 0.5
BRAF-201ENST00000288602 EIF2S1P05198 315 aaKnown RBP18.17■□□□□ 0.5
BRAF-201ENST00000288602 C21orf33P30042 268 aaPredicted RBP18.17■□□□□ 0.5
BRAF-201ENST00000288602 ENTPD1P49961 510 aa18.17■□□□□ 0.5
BRAF-201ENST00000288602 RPS15AP62244 130 aaKnown RBP18.17■□□□□ 0.5
BRAF-201ENST00000288602 TBC1D25Q3MII6 688 aa18.17■□□□□ 0.5
BRAF-201ENST00000288602 COLEC12Q5KU26 742 aa18.17■□□□□ 0.5
BRAF-201ENST00000288602 FCRL6Q6DN72 434 aa18.17■□□□□ 0.5
BRAF-201ENST00000288602 LSRQ86X29 649 aaPredicted RBP18.17■□□□□ 0.5
BRAF-201ENST00000288602 SIMC1Q8NDZ2 872 aa18.17■□□□□ 0.5
BRAF-201ENST00000288602 SRFBP1Q8NEF9 429 aaKnown RBP18.17■□□□□ 0.5
BRAF-201ENST00000288602 RORBQ92753 470 aa18.17■□□□□ 0.5
BRAF-201ENST00000288602 TRPV5Q9NQA5 729 aa18.17■□□□□ 0.5
BRAF-201ENST00000288602 SEMA3GQ9NS98 782 aa18.17■□□□□ 0.5
BRAF-201ENST00000288602 ZNF226Q9NYT6 803 aa18.17■□□□□ 0.5
BRAF-201ENST00000288602 ZNF860A6NHJ4 632 aa18.16■□□□□ 0.5
BRAF-201ENST00000288602 GUCY1B2O75343 617 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms