RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 ZNF548Q8NEK5 533 aaPredicted RBP11.98□□□□□ -0.49
SLC6A1-201ENST00000287766 OR2L3Q8NG85 312 aa11.98□□□□□ -0.49
SLC6A1-201ENST00000287766 OR7G1Q8NGA0 311 aa11.98□□□□□ -0.49
SLC6A1-201ENST00000287766 OVCA2Q8WZ82 227 aa11.98□□□□□ -0.49
SLC6A1-201ENST00000287766 SLC12A9Q9BXP2 914 aa11.98□□□□□ -0.49
SLC6A1-201ENST00000287766 TTTY10Q9BZA0 68 aa11.98□□□□□ -0.49
SLC6A1-201ENST00000287766 ZNF700Q9H0M5 742 aa11.98□□□□□ -0.49
SLC6A1-201ENST00000287766 EXO5Q9H790 373 aa11.98□□□□□ -0.49
SLC6A1-201ENST00000287766 LRRC37AA6NMS7 1700 aa11.98□□□□□ -0.49
SLC6A1-201ENST00000287766 A0A1W2PPK0 400 aa11.98□□□□□ -0.49
SLC6A1-201ENST00000287766 GTPBP1O00178 669 aaKnown RBP11.98□□□□□ -0.49
SLC6A1-201ENST00000287766 CACNG3O60359 315 aa11.98□□□□□ -0.49
SLC6A1-201ENST00000287766 CHRNB1P11230 501 aa11.98□□□□□ -0.49
SLC6A1-201ENST00000287766 BCL2L15Q5TBC7 163 aa11.98□□□□□ -0.49
SLC6A1-201ENST00000287766 AGAP6Q5VW22 663 aa11.98□□□□□ -0.49
SLC6A1-201ENST00000287766 EIF5AL1Q6IS14 154 aaKnown RBP11.98□□□□□ -0.49
SLC6A1-201ENST00000287766 BORAQ6PGQ7 559 aa11.98□□□□□ -0.49
SLC6A1-201ENST00000287766 HSD11B1LQ7Z5J1 315 aa11.98□□□□□ -0.49
SLC6A1-201ENST00000287766 LHFPL3Q86UP9 236 aa11.98□□□□□ -0.49
SLC6A1-201ENST00000287766 VRK3Q8IV63 474 aa11.98□□□□□ -0.49
SLC6A1-201ENST00000287766 OR7G3Q8NG95 312 aa11.98□□□□□ -0.49
SLC6A1-201ENST00000287766 HMGCLL1Q8TB92 370 aa11.98□□□□□ -0.49
SLC6A1-201ENST00000287766 TMEM80Q96HE8 168 aa11.98□□□□□ -0.49
SLC6A1-201ENST00000287766 COQ10AQ96MF6 247 aa11.98□□□□□ -0.49
SLC6A1-201ENST00000287766 AGAP4Q96P64 663 aa11.98□□□□□ -0.49
SLC6A1-201ENST00000287766 C7orf50Q9BRJ6 194 aaKnown RBP11.98□□□□□ -0.49
SLC6A1-201ENST00000287766 TMEM168Q9H0V1 697 aa11.98□□□□□ -0.49
SLC6A1-201ENST00000287766 IKZF5Q9H5V7 419 aa11.98□□□□□ -0.49
SLC6A1-201ENST00000287766 ADAP2Q9NPF8 381 aa11.98□□□□□ -0.49
SLC6A1-201ENST00000287766 CLEC4EQ9ULY5 219 aa11.98□□□□□ -0.49
SLC6A1-201ENST00000287766 HCN4Q9Y3Q4 1203 aa11.98□□□□□ -0.49
SLC6A1-201ENST00000287766 NRXN2Q9P2S2 1712 aa11.98□□□□□ -0.49
SLC6A1-201ENST00000287766 WNK3Q9BYP7 1800 aa11.98□□□□□ -0.49
SLC6A1-201ENST00000287766 ARNTLO00327 626 aa11.98□□□□□ -0.49
SLC6A1-201ENST00000287766 PEX11BO96011 259 aa11.98□□□□□ -0.49
SLC6A1-201ENST00000287766 APOFQ13790 326 aa11.98□□□□□ -0.49
SLC6A1-201ENST00000287766 CBFBQ13951 182 aa11.98□□□□□ -0.49
SLC6A1-201ENST00000287766 OR2L2Q8NH16 312 aa11.98□□□□□ -0.49
SLC6A1-201ENST00000287766 TMEM185BQ9H7F4 350 aa11.98□□□□□ -0.49
SLC6A1-201ENST00000287766 TMEM27Q9HBJ8 222 aa11.98□□□□□ -0.49
SLC6A1-201ENST00000287766 PCDHB16Q9NRJ7 776 aa11.98□□□□□ -0.49
SLC6A1-201ENST00000287766 PHPT1Q9NRX4 125 aaPredicted RBP11.98□□□□□ -0.49
SLC6A1-201ENST00000287766 QPCTLQ9NXS2 382 aa11.98□□□□□ -0.49
SLC6A1-201ENST00000287766 GREB1LQ9C091 1923 aaPredicted RBP11.98□□□□□ -0.49
SLC6A1-201ENST00000287766 TMEM189-UBE2V1I3L0A0 370 aa11.98□□□□□ -0.49
SLC6A1-201ENST00000287766 CEP290O15078 2479 aa11.98□□□□□ -0.49
SLC6A1-201ENST00000287766 ICMTO60725 284 aa11.98□□□□□ -0.49
SLC6A1-201ENST00000287766 FMO6PO60774 539 aa11.98□□□□□ -0.49
SLC6A1-201ENST00000287766 PGAM2P15259 253 aa11.98□□□□□ -0.49
SLC6A1-201ENST00000287766 RAB3BP20337 219 aa11.98□□□□□ -0.49
SLC6A1-201ENST00000287766 KELP23276 732 aa11.98□□□□□ -0.49
SLC6A1-201ENST00000287766 FSHRP23945 695 aa11.98□□□□□ -0.49
SLC6A1-201ENST00000287766 GRIN2CQ14957 1233 aa11.98□□□□□ -0.49
SLC6A1-201ENST00000287766 LARS2Q15031 903 aaKnown RBP11.98□□□□□ -0.49
SLC6A1-201ENST00000287766 NTRK2Q16620 822 aa11.98□□□□□ -0.49
SLC6A1-201ENST00000287766 ATAT1Q5SQI0 421 aa11.98□□□□□ -0.49
SLC6A1-201ENST00000287766 FAM46CQ5VWP2 391 aa11.98□□□□□ -0.49
SLC6A1-201ENST00000287766 Q6ZNX1 250 aa11.98□□□□□ -0.49
SLC6A1-201ENST00000287766 SPRED1Q7Z699 444 aa11.98□□□□□ -0.49
SLC6A1-201ENST00000287766 TMEM17Q86X19 198 aa11.98□□□□□ -0.49
SLC6A1-201ENST00000287766 OR9A1PQ8NGU1 263 aa11.98□□□□□ -0.49
SLC6A1-201ENST00000287766 SPACA7Q96KW9 195 aa11.98□□□□□ -0.49
SLC6A1-201ENST00000287766 DHRS1Q96LJ7 313 aa11.98□□□□□ -0.49
SLC6A1-201ENST00000287766 SGIP1Q9BQI5 828 aa11.98□□□□□ -0.49
SLC6A1-201ENST00000287766 SPHK2Q9NRA0 654 aa11.98□□□□□ -0.49
SLC6A1-201ENST00000287766 MRPL15Q9P015 296 aaKnown RBP11.98□□□□□ -0.49
SLC6A1-201ENST00000287766 ABCD2Q9UBJ2 740 aa11.98□□□□□ -0.49
SLC6A1-201ENST00000287766 PCDHGA4Q9Y5G9 962 aa11.98□□□□□ -0.49
SLC6A1-201ENST00000287766 DOCK1Q14185 1865 aa11.97□□□□□ -0.49
SLC6A1-201ENST00000287766 LOC105369274A0A096LPK9 316 aa11.97□□□□□ -0.49
SLC6A1-201ENST00000287766 TAPBPO15533 448 aa11.97□□□□□ -0.49
SLC6A1-201ENST00000287766 AP1G1O43747 822 aa11.97□□□□□ -0.49
SLC6A1-201ENST00000287766 RPP14O95059 124 aaKnown RBP11.97□□□□□ -0.49
SLC6A1-201ENST00000287766 ZNF30P17039 623 aa11.97□□□□□ -0.49
SLC6A1-201ENST00000287766 ALAS2P22557 587 aa11.97□□□□□ -0.49
SLC6A1-201ENST00000287766 EIF5AP63241 154 aaKnown RBP11.97□□□□□ -0.49
SLC6A1-201ENST00000287766 HTRA3P83110 453 aa11.97□□□□□ -0.49
SLC6A1-201ENST00000287766 MBTPS1Q14703 1052 aa11.97□□□□□ -0.49
SLC6A1-201ENST00000287766 RPS26P11Q5JNZ5 115 aaPredicted RBP11.97□□□□□ -0.49
SLC6A1-201ENST00000287766 LIPJQ5W064 366 aa11.97□□□□□ -0.49
SLC6A1-201ENST00000287766 VITQ6UXI7 678 aa11.97□□□□□ -0.49
SLC6A1-201ENST00000287766 WASH2PQ6VEQ5 465 aa11.97□□□□□ -0.49
SLC6A1-201ENST00000287766 ZNF783Q6ZMS7 281 aa11.97□□□□□ -0.49
SLC6A1-201ENST00000287766 COMMD6Q7Z4G1 85 aa11.97□□□□□ -0.49
SLC6A1-201ENST00000287766 GALNT7Q86SF2 657 aa11.97□□□□□ -0.49
SLC6A1-201ENST00000287766 OR4N4Q8N0Y3 316 aa11.97□□□□□ -0.49
SLC6A1-201ENST00000287766 MAPKAP1Q9BPZ7 522 aa11.97□□□□□ -0.49
SLC6A1-201ENST00000287766 KCNK12Q9HB15 430 aa11.97□□□□□ -0.49
SLC6A1-201ENST00000287766 MGAT4CQ9UBM8 478 aa11.97□□□□□ -0.49
SLC6A1-201ENST00000287766 DPP7Q9UHL4 492 aa11.97□□□□□ -0.49
SLC6A1-201ENST00000287766 ERVW-1Q9UQF0 538 aa11.97□□□□□ -0.49
SLC6A1-201ENST00000287766 RBMXL2O75526 392 aaKnown RBP11.97□□□□□ -0.49
SLC6A1-201ENST00000287766 RASGRP1O95267 797 aa11.97□□□□□ -0.49
SLC6A1-201ENST00000287766 PAK4O96013 591 aaPredicted RBP11.97□□□□□ -0.49
SLC6A1-201ENST00000287766 CAPNS1P04632 268 aa11.97□□□□□ -0.49
SLC6A1-201ENST00000287766 ZNF10P21506 573 aaPredicted RBP11.97□□□□□ -0.49
SLC6A1-201ENST00000287766 IL32P24001 234 aa11.97□□□□□ -0.49
SLC6A1-201ENST00000287766 PNCKQ6P2M8 343 aa11.97□□□□□ -0.49
SLC6A1-201ENST00000287766 SPATC1Q76KD6 591 aa11.97□□□□□ -0.49
SLC6A1-201ENST00000287766 KCTD9Q7L273 389 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms