RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 MSLNLQ96KJ4 702 aa10.78□□□□□ -0.68
SCLT1-201ENST00000281142 MAPKAP1Q9BPZ7 522 aa10.78□□□□□ -0.68
SCLT1-201ENST00000281142 REV1Q9UBZ9 1251 aa10.78□□□□□ -0.68
SCLT1-201ENST00000281142 ATP6V1G2-DDX39BF2Z307 99 aa10.77□□□□□ -0.68
SCLT1-201ENST00000281142 PLOD3O60568 738 aa10.77□□□□□ -0.68
SCLT1-201ENST00000281142 IGFBP4P22692 258 aa10.77□□□□□ -0.68
SCLT1-201ENST00000281142 SPAM1P38567 509 aa10.77□□□□□ -0.68
SCLT1-201ENST00000281142 CDK6Q00534 326 aa10.77□□□□□ -0.68
SCLT1-201ENST00000281142 SLC5A12Q1EHB4 618 aa10.77□□□□□ -0.68
SCLT1-201ENST00000281142 METTL2BQ6P1Q9 378 aaKnown RBP10.77□□□□□ -0.68
SCLT1-201ENST00000281142 FAM122CQ6P4D5 195 aa10.77□□□□□ -0.68
SCLT1-201ENST00000281142 USP30Q70CQ3 517 aa10.77□□□□□ -0.68
SCLT1-201ENST00000281142 ZNF767PQ75MW2 155 aa10.77□□□□□ -0.68
SCLT1-201ENST00000281142 TMEM150AQ86TG1 271 aa10.77□□□□□ -0.68
SCLT1-201ENST00000281142 DCLRE1CQ96SD1 692 aaKnown RBP10.77□□□□□ -0.68
SCLT1-201ENST00000281142 CDCA3Q99618 268 aaPredicted RBP10.77□□□□□ -0.68
SCLT1-201ENST00000281142 RACGAP1Q9H0H5 632 aa10.77□□□□□ -0.68
SCLT1-201ENST00000281142 FZD3Q9NPG1 666 aa10.77□□□□□ -0.68
SCLT1-201ENST00000281142 THSD1Q9NS62 852 aa10.77□□□□□ -0.68
SCLT1-201ENST00000281142 SPATA6Q9NWH7 488 aaPredicted RBP10.77□□□□□ -0.68
SCLT1-201ENST00000281142 BTNL2Q9UIR0 455 aa10.77□□□□□ -0.68
SCLT1-201ENST00000281142 TMCC3Q9ULS5 477 aa10.77□□□□□ -0.68
SCLT1-201ENST00000281142 SPIN1Q9Y657 262 aaPredicted RBP10.77□□□□□ -0.68
SCLT1-201ENST00000281142 MGAT4DA6NG13 374 aa10.77□□□□□ -0.69
SCLT1-201ENST00000281142 ARHGEF9O43307 516 aa10.77□□□□□ -0.69
SCLT1-201ENST00000281142 PRMT3O60678 531 aa10.77□□□□□ -0.69
SCLT1-201ENST00000281142 HPGDSO60760 199 aa10.77□□□□□ -0.69
SCLT1-201ENST00000281142 ZNF8P17098 575 aaPredicted RBP10.77□□□□□ -0.69
SCLT1-201ENST00000281142 CSNK1DP48730 415 aa10.77□□□□□ -0.69
SCLT1-201ENST00000281142 RBBP4Q09028 425 aa10.77□□□□□ -0.69
SCLT1-201ENST00000281142 TNK1Q13470 666 aa10.77□□□□□ -0.69
SCLT1-201ENST00000281142 INSL4Q14641 139 aa10.77□□□□□ -0.69
SCLT1-201ENST00000281142 CCNJQ5T5M9 372 aa10.77□□□□□ -0.69
SCLT1-201ENST00000281142 TPGS1Q6ZTW0 290 aa10.77□□□□□ -0.69
SCLT1-201ENST00000281142 SHFQ7M4L6 423 aa10.77□□□□□ -0.69
SCLT1-201ENST00000281142 PLCZ1Q86YW0 608 aa10.77□□□□□ -0.69
SCLT1-201ENST00000281142 LIX1LQ8IVB5 337 aa10.77□□□□□ -0.69
SCLT1-201ENST00000281142 CHTF18Q8WVB6 975 aa10.77□□□□□ -0.69
SCLT1-201ENST00000281142 TM9SF4Q92544 642 aa10.77□□□□□ -0.69
SCLT1-201ENST00000281142 MARVELD3Q96A59 401 aa10.77□□□□□ -0.69
SCLT1-201ENST00000281142 ZNF707Q96C28 371 aaPredicted RBP10.77□□□□□ -0.69
SCLT1-201ENST00000281142 TRMT2BQ96GJ1 504 aaKnown RBP10.77□□□□□ -0.69
SCLT1-201ENST00000281142 KATNB1Q9BVA0 655 aa10.77□□□□□ -0.69
SCLT1-201ENST00000281142 SGK2Q9HBY8 427 aa10.77□□□□□ -0.69
SCLT1-201ENST00000281142 C1GALT1Q9NS00 363 aa10.77□□□□□ -0.69
SCLT1-201ENST00000281142 ENPP4Q9Y6X5 453 aa10.77□□□□□ -0.69
SCLT1-201ENST00000281142 TMEM202A6NGA9 273 aa10.76□□□□□ -0.69
SCLT1-201ENST00000281142 WASHC1A8K0Z3 465 aa10.76□□□□□ -0.69
SCLT1-201ENST00000281142 NPIPB8E9PQR5 432 aa10.76□□□□□ -0.69
SCLT1-201ENST00000281142 MYL12BO14950 172 aa10.76□□□□□ -0.69
SCLT1-201ENST00000281142 PDGFAP04085 211 aa10.76□□□□□ -0.69
SCLT1-201ENST00000281142 CPN2P22792 545 aa10.76□□□□□ -0.69
SCLT1-201ENST00000281142 HLA-DMAP28067 261 aa10.76□□□□□ -0.69
SCLT1-201ENST00000281142 SOAT1P35610 550 aa10.76□□□□□ -0.69
SCLT1-201ENST00000281142 NSG1P42857 185 aa10.76□□□□□ -0.69
SCLT1-201ENST00000281142 MAPK12P53778 367 aa10.76□□□□□ -0.69
SCLT1-201ENST00000281142 EEF1A2Q05639 463 aaKnown RBP10.76□□□□□ -0.69
SCLT1-201ENST00000281142 LRRC32Q14392 662 aa10.76□□□□□ -0.69
SCLT1-201ENST00000281142 TAF12Q16514 161 aa10.76□□□□□ -0.69
SCLT1-201ENST00000281142 LCN1P1Q5VSP4 162 aa10.76□□□□□ -0.69
SCLT1-201ENST00000281142 CNIH2Q6PI25 160 aa10.76□□□□□ -0.69
SCLT1-201ENST00000281142 TIGD4Q8IY51 512 aa10.76□□□□□ -0.69
SCLT1-201ENST00000281142 TMEM145Q8NBT3 493 aa10.76□□□□□ -0.69
SCLT1-201ENST00000281142 HUS1BQ8NHY5 278 aa10.76□□□□□ -0.69
SCLT1-201ENST00000281142 GEMIN6Q8WXD5 167 aaKnown RBP10.76□□□□□ -0.69
SCLT1-201ENST00000281142 C1GALT1C1Q96EU7 318 aa10.76□□□□□ -0.69
SCLT1-201ENST00000281142 OR4K3Q96R72 315 aa10.76□□□□□ -0.69
SCLT1-201ENST00000281142 MND1Q9BWT6 205 aa10.76□□□□□ -0.69
SCLT1-201ENST00000281142 IL21Q9HBE4 155 aa10.76□□□□□ -0.69
SCLT1-201ENST00000281142 TVP23BQ9NYZ1 205 aa10.76□□□□□ -0.69
SCLT1-201ENST00000281142 DSPPQ9NZW4 1301 aa10.76□□□□□ -0.69
SCLT1-201ENST00000281142 GTPBP1O00178 669 aaKnown RBP10.76□□□□□ -0.69
SCLT1-201ENST00000281142 PRKYO43930 277 aa10.76□□□□□ -0.69
SCLT1-201ENST00000281142 C1QBP02746 253 aa10.76□□□□□ -0.69
SCLT1-201ENST00000281142 SLC2A2P11168 524 aaPredicted RBP10.76□□□□□ -0.69
SCLT1-201ENST00000281142 PIPP12273 146 aaPredicted RBP10.76□□□□□ -0.69
SCLT1-201ENST00000281142 ZNF250P15622 560 aa10.76□□□□□ -0.69
SCLT1-201ENST00000281142 ZNF30P17039 623 aa10.76□□□□□ -0.69
SCLT1-201ENST00000281142 TNNI3P19429 210 aa10.76□□□□□ -0.69
SCLT1-201ENST00000281142 AGFG1P52594 562 aaKnown RBP10.76□□□□□ -0.69
SCLT1-201ENST00000281142 RPS13P62277 151 aaKnown RBP10.76□□□□□ -0.69
SCLT1-201ENST00000281142 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.76□□□□□ -0.69
SCLT1-201ENST00000281142 PCDH1Q08174 1060 aa10.76□□□□□ -0.69
SCLT1-201ENST00000281142 NAE1Q13564 534 aa10.76□□□□□ -0.69
SCLT1-201ENST00000281142 WSCD2Q2TBF2 565 aa10.76□□□□□ -0.69
SCLT1-201ENST00000281142 DDI2Q5TDH0 399 aa10.76□□□□□ -0.69
SCLT1-201ENST00000281142 B3GLCTQ6Y288 498 aa10.76□□□□□ -0.69
SCLT1-201ENST00000281142 Q8N402 240 aa10.76□□□□□ -0.69
SCLT1-201ENST00000281142 LILRA3Q8N6C8 439 aaPredicted RBP10.76□□□□□ -0.69
SCLT1-201ENST00000281142 GDPD1Q8N9F7 314 aa10.76□□□□□ -0.69
SCLT1-201ENST00000281142 VPS37AQ8NEZ2 397 aa10.76□□□□□ -0.69
SCLT1-201ENST00000281142 METTL2AQ96IZ6 378 aaKnown RBP10.76□□□□□ -0.69
SCLT1-201ENST00000281142 TRIM45Q9H8W5 580 aaPredicted RBP10.76□□□□□ -0.69
SCLT1-201ENST00000281142 TLX2O43763 284 aaPredicted RBP10.76□□□□□ -0.69
SCLT1-201ENST00000281142 CCR2P41597 374 aa10.76□□□□□ -0.69
SCLT1-201ENST00000281142 SOX9P48436 509 aa10.76□□□□□ -0.69
SCLT1-201ENST00000281142 HMGA2P52926 109 aa10.76□□□□□ -0.69
SCLT1-201ENST00000281142 BNC1Q01954 994 aa10.76□□□□□ -0.69
SCLT1-201ENST00000281142 DLX2Q07687 328 aaPredicted RBP10.76□□□□□ -0.69
SCLT1-201ENST00000281142 BCL2L1Q07817 233 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms