RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 ZNF681Q96N22 645 aa17.1■□□□□ 0.33
SDF4-201ENST00000263741 SLAMF7Q9NQ25 335 aa17.1■□□□□ 0.33
SDF4-201ENST00000263741 SLC35C2Q9NQQ7 365 aa17.1■□□□□ 0.33
SDF4-201ENST00000263741 BATF3Q9NR55 127 aa17.1■□□□□ 0.33
SDF4-201ENST00000263741 ZNF223Q9UK11 482 aaPredicted RBP17.1■□□□□ 0.33
SDF4-201ENST00000263741 L3MBTL1Q9Y468 752 aa17.1■□□□□ 0.33
SDF4-201ENST00000263741 ZNF780BQ9Y6R6 833 aa17.1■□□□□ 0.33
SDF4-201ENST00000263741 VPS4BO75351 444 aa17.09■□□□□ 0.33
SDF4-201ENST00000263741 GSTM5P46439 218 aa17.09■□□□□ 0.33
SDF4-201ENST00000263741 B3GNTL1Q67FW5 361 aaPredicted RBP17.09■□□□□ 0.33
SDF4-201ENST00000263741 PCSK4Q6UW60 755 aa17.09■□□□□ 0.33
SDF4-201ENST00000263741 KBTBD2Q8IY47 623 aa17.09■□□□□ 0.33
SDF4-201ENST00000263741 CCDC116Q8IYX3 515 aa17.09■□□□□ 0.33
SDF4-201ENST00000263741 B3GNT7Q8NFL0 401 aa17.09■□□□□ 0.33
SDF4-201ENST00000263741 SLC2A12Q8TD20 617 aa17.09■□□□□ 0.33
SDF4-201ENST00000263741 REEP4Q9H6H4 257 aa17.09■□□□□ 0.33
SDF4-201ENST00000263741 ANKRA2Q9H9E1 313 aa17.09■□□□□ 0.33
SDF4-201ENST00000263741 SH3BP4Q9P0V3 963 aa17.09■□□□□ 0.33
SDF4-201ENST00000263741 ERVK-19Q9WJR5 959 aa17.09■□□□□ 0.33
SDF4-201ENST00000263741 ENTPD4Q9Y227 616 aa17.09■□□□□ 0.33
SDF4-201ENST00000263741 A8MUI8 341 aa17.09■□□□□ 0.33
SDF4-201ENST00000263741 E9PBE3 544 aa17.09■□□□□ 0.33
SDF4-201ENST00000263741 SCAMP2O15127 329 aaKnown RBP17.09■□□□□ 0.33
SDF4-201ENST00000263741 KLHL41O60662 606 aa17.09■□□□□ 0.33
SDF4-201ENST00000263741 DDAH2O95865 285 aa17.09■□□□□ 0.33
SDF4-201ENST00000263741 SLC35E2P0CK97 266 aa17.09■□□□□ 0.33
SDF4-201ENST00000263741 PRPS2P11908 318 aa17.09■□□□□ 0.33
SDF4-201ENST00000263741 COX7A2P14406 83 aa17.09■□□□□ 0.33
SDF4-201ENST00000263741 PORP16435 677 aaPredicted RBP17.09■□□□□ 0.33
SDF4-201ENST00000263741 ASMTP46597 345 aa17.09■□□□□ 0.33
SDF4-201ENST00000263741 MAD2L1Q13257 205 aaPredicted RBP17.09■□□□□ 0.33
SDF4-201ENST00000263741 LY6DQ14210 128 aa17.09■□□□□ 0.33
SDF4-201ENST00000263741 MPEG1Q2M385 716 aa17.09■□□□□ 0.33
SDF4-201ENST00000263741 OGFOD2Q6N063 350 aa17.09■□□□□ 0.33
SDF4-201ENST00000263741 APCDD1LQ8NCL9 501 aa17.09■□□□□ 0.33
SDF4-201ENST00000263741 SIMC1Q8NDZ2 872 aa17.09■□□□□ 0.33
SDF4-201ENST00000263741 OR9A2Q8NGT5 310 aa17.09■□□□□ 0.33
SDF4-201ENST00000263741 THAP3Q8WTV1 239 aaPredicted RBP17.09■□□□□ 0.33
SDF4-201ENST00000263741 RIT1Q92963 219 aa17.09■□□□□ 0.33
SDF4-201ENST00000263741 PPCDCQ96CD2 204 aa17.09■□□□□ 0.33
SDF4-201ENST00000263741 AIG1Q9NVV5 245 aa17.09■□□□□ 0.33
SDF4-201ENST00000263741 ASIC5Q9NY37 505 aa17.09■□□□□ 0.33
SDF4-201ENST00000263741 EHD3Q9NZN3 535 aa17.09■□□□□ 0.33
SDF4-201ENST00000263741 PTGFRNQ9P2B2 879 aa17.09■□□□□ 0.33
SDF4-201ENST00000263741 BSNQ9UPA5 3926 aa17.08■□□□□ 0.33
SDF4-201ENST00000263741 TRBV11-1A0A0K0K1C0 115 aa17.08■□□□□ 0.33
SDF4-201ENST00000263741 PDGFAP04085 211 aa17.08■□□□□ 0.33
SDF4-201ENST00000263741 SERPINA7P05543 415 aa17.08■□□□□ 0.33
SDF4-201ENST00000263741 CSNK2A2P19784 350 aaPredicted RBP17.08■□□□□ 0.33
SDF4-201ENST00000263741 HPCAL1P37235 193 aa17.08■□□□□ 0.33
SDF4-201ENST00000263741 MRPS35P82673 323 aaKnown RBP17.08■□□□□ 0.33
SDF4-201ENST00000263741 RHDQ02161 417 aa17.08■□□□□ 0.33
SDF4-201ENST00000263741 ZNF267Q14586 743 aaPredicted RBP17.08■□□□□ 0.33
SDF4-201ENST00000263741 EXT1Q16394 746 aa17.08■□□□□ 0.33
SDF4-201ENST00000263741 FAM111BQ6SJ93 734 aa17.08■□□□□ 0.33
SDF4-201ENST00000263741 LRRC25Q8N386 305 aaPredicted RBP17.08■□□□□ 0.33
SDF4-201ENST00000263741 EXD3Q8N9H8 876 aa17.08■□□□□ 0.33
SDF4-201ENST00000263741 OR14A16Q8NHC5 309 aa17.08■□□□□ 0.33
SDF4-201ENST00000263741 SUN3Q8TAQ9 357 aa17.08■□□□□ 0.33
SDF4-201ENST00000263741 PSMF1Q92530 271 aa17.08■□□□□ 0.33
SDF4-201ENST00000263741 BRINP2Q9C0B6 783 aa17.08■□□□□ 0.33
SDF4-201ENST00000263741 KCNK13Q9HB14 408 aa17.08■□□□□ 0.33
SDF4-201ENST00000263741 ZBTB20Q9HC78 741 aaPredicted RBP17.08■□□□□ 0.33
SDF4-201ENST00000263741 TCF7L2Q9NQB0 619 aa17.08■□□□□ 0.33
SDF4-201ENST00000263741 RALYQ9UKM9 306 aaKnown RBP17.08■□□□□ 0.33
SDF4-201ENST00000263741 PSME2Q9UL46 239 aa17.08■□□□□ 0.33
SDF4-201ENST00000263741 A0A0G2JND7 137 aa17.08■□□□□ 0.32
SDF4-201ENST00000263741 GABRR3A8MPY1 467 aa17.08■□□□□ 0.32
SDF4-201ENST00000263741 PRKNO60260 465 aaPredicted RBP17.08■□□□□ 0.32
SDF4-201ENST00000263741 MAN1A2O60476 641 aa17.08■□□□□ 0.32
SDF4-201ENST00000263741 RPSAP08865 295 aaKnown RBP17.08■□□□□ 0.32
SDF4-201ENST00000263741 SSTR4P31391 388 aa17.08■□□□□ 0.32
SDF4-201ENST00000263741 GPR143P51810 404 aa17.08■□□□□ 0.32
SDF4-201ENST00000263741 PDE7AQ13946 482 aa17.08■□□□□ 0.32
SDF4-201ENST00000263741 ACTRT2Q8TDY3 377 aa17.08■□□□□ 0.32
SDF4-201ENST00000263741 DAZLQ92904 295 aaKnown RBP17.08■□□□□ 0.32
SDF4-201ENST00000263741 ABHD17AQ96GS6 310 aa17.08■□□□□ 0.32
SDF4-201ENST00000263741 TEX37Q96LM6 180 aa17.08■□□□□ 0.32
SDF4-201ENST00000263741 BBS4Q96RK4 519 aa17.08■□□□□ 0.32
SDF4-201ENST00000263741 SLC25A23Q9BV35 468 aa17.08■□□□□ 0.32
SDF4-201ENST00000263741 LHPPQ9H008 270 aa17.08■□□□□ 0.32
SDF4-201ENST00000263741 LIN28AQ9H9Z2 209 aaKnown RBP17.08■□□□□ 0.32
SDF4-201ENST00000263741 CXorf21Q9HAI6 301 aa17.08■□□□□ 0.32
SDF4-201ENST00000263741 NME6O75414 186 aaPredicted RBP17.07■□□□□ 0.32
SDF4-201ENST00000263741 KCNAB2Q13303 367 aa17.07■□□□□ 0.32
SDF4-201ENST00000263741 MYBPC3Q14896 1274 aa17.07■□□□□ 0.32
SDF4-201ENST00000263741 SMU1Q2TAY7 513 aa17.07■□□□□ 0.32
SDF4-201ENST00000263741 C16orf47Q6ZP98 133 aaPredicted RBP17.07■□□□□ 0.32
SDF4-201ENST00000263741 ACAD11Q709F0 780 aa17.07■□□□□ 0.32
SDF4-201ENST00000263741 GALNT12Q8IXK2 581 aa17.07■□□□□ 0.32
SDF4-201ENST00000263741 CEP70Q8NHQ1 597 aa17.07■□□□□ 0.32
SDF4-201ENST00000263741 ZNF721Q8TF20 911 aa17.07■□□□□ 0.32
SDF4-201ENST00000263741 KAT2AQ92830 837 aa17.07■□□□□ 0.32
SDF4-201ENST00000263741 MMP25Q9NPA2 562 aa17.07■□□□□ 0.32
SDF4-201ENST00000263741 ZNF71Q9NQZ8 489 aaPredicted RBP17.07■□□□□ 0.32
SDF4-201ENST00000263741 GIMAP4Q9NUV9 329 aa17.07■□□□□ 0.32
SDF4-201ENST00000263741 ANKRD28O15084 1053 aa17.06■□□□□ 0.32
SDF4-201ENST00000263741 CEACAM4O75871 244 aa17.06■□□□□ 0.32
SDF4-201ENST00000263741 TGDSO95455 350 aa17.06■□□□□ 0.32
SDF4-201ENST00000263741 F10P00742 488 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms