RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 RORBQ92753 470 aa12.21□□□□□ -0.46
SPTLC1-201ENST00000262554 UBE2FQ969M7 185 aa12.21□□□□□ -0.46
SPTLC1-201ENST00000262554 THAP11Q96EK4 314 aa12.21□□□□□ -0.46
SPTLC1-201ENST00000262554 MSANTD3Q96H12 275 aa12.21□□□□□ -0.46
SPTLC1-201ENST00000262554 FCRL4Q96PJ5 515 aa12.21□□□□□ -0.46
SPTLC1-201ENST00000262554 MAPKAP1Q9BPZ7 522 aa12.21□□□□□ -0.46
SPTLC1-201ENST00000262554 GPN2Q9H9Y4 310 aaPredicted RBP12.21□□□□□ -0.46
SPTLC1-201ENST00000262554 C3orf14Q9HBI5 128 aa12.21□□□□□ -0.46
SPTLC1-201ENST00000262554 POLMQ9NP87 494 aaPredicted RBP12.21□□□□□ -0.46
SPTLC1-201ENST00000262554 TMCC3Q9ULS5 477 aa12.21□□□□□ -0.46
SPTLC1-201ENST00000262554 PCDHGA10Q9Y5H3 936 aa12.21□□□□□ -0.46
SPTLC1-201ENST00000262554 GPC6Q9Y625 555 aaPredicted RBP12.21□□□□□ -0.46
SPTLC1-201ENST00000262554 OR6C74A6NCV1 312 aa12.2□□□□□ -0.46
SPTLC1-201ENST00000262554 URADA6NGE7 173 aa12.2□□□□□ -0.46
SPTLC1-201ENST00000262554 EMC8O43402 210 aa12.2□□□□□ -0.46
SPTLC1-201ENST00000262554 INMTO95050 263 aa12.2□□□□□ -0.46
SPTLC1-201ENST00000262554 C8orf89P0DMQ9 161 aa12.2□□□□□ -0.46
SPTLC1-201ENST00000262554 NR2F6P10588 404 aa12.2□□□□□ -0.46
SPTLC1-201ENST00000262554 ALPPL2P10696 532 aa12.2□□□□□ -0.46
SPTLC1-201ENST00000262554 CDK4P11802 303 aa12.2□□□□□ -0.46
SPTLC1-201ENST00000262554 POLR2CP19387 275 aaPredicted RBP12.2□□□□□ -0.46
SPTLC1-201ENST00000262554 MAGP20916 626 aa12.2□□□□□ -0.46
SPTLC1-201ENST00000262554 BUD31P41223 144 aaPredicted RBP12.2□□□□□ -0.46
SPTLC1-201ENST00000262554 GSSP48637 474 aa12.2□□□□□ -0.46
SPTLC1-201ENST00000262554 MAPK10P53779 464 aa12.2□□□□□ -0.46
SPTLC1-201ENST00000262554 SMIM11AP58511 58 aa12.2□□□□□ -0.46
SPTLC1-201ENST00000262554 MVKQ03426 396 aa12.2□□□□□ -0.46
SPTLC1-201ENST00000262554 GPR18Q14330 331 aa12.2□□□□□ -0.46
SPTLC1-201ENST00000262554 SUZ12Q15022 739 aaKnown RBP12.2□□□□□ -0.46
SPTLC1-201ENST00000262554 ZNF750Q32MQ0 723 aa12.2□□□□□ -0.46
SPTLC1-201ENST00000262554 FGD3Q5JSP0 725 aa12.2□□□□□ -0.46
SPTLC1-201ENST00000262554 FBXO42Q6P3S6 717 aa12.2□□□□□ -0.46
SPTLC1-201ENST00000262554 TMEM107Q6UX40 140 aa12.2□□□□□ -0.46
SPTLC1-201ENST00000262554 PRSS48Q7RTY5 328 aa12.2□□□□□ -0.46
SPTLC1-201ENST00000262554 ABI3BPQ7Z7G0 1075 aa12.2□□□□□ -0.46
SPTLC1-201ENST00000262554 TRIM73Q86UV7 250 aa12.2□□□□□ -0.46
SPTLC1-201ENST00000262554 AQP11Q8NBQ7 271 aa12.2□□□□□ -0.46
SPTLC1-201ENST00000262554 FLCNQ8NFG4 579 aa12.2□□□□□ -0.46
SPTLC1-201ENST00000262554 OR13H1Q8NG92 308 aa12.2□□□□□ -0.46
SPTLC1-201ENST00000262554 OR10G6Q8NH81 332 aa12.2□□□□□ -0.46
SPTLC1-201ENST00000262554 UTP15Q8TED0 518 aaKnown RBP12.2□□□□□ -0.46
SPTLC1-201ENST00000262554 APH1BQ8WW43 257 aa12.2□□□□□ -0.46
SPTLC1-201ENST00000262554 FUNDC2Q9BWH2 189 aa12.2□□□□□ -0.46
SPTLC1-201ENST00000262554 TWSG1Q9GZX9 223 aa12.2□□□□□ -0.46
SPTLC1-201ENST00000262554 C6orf106Q9H6K1 298 aaPredicted RBP12.2□□□□□ -0.46
SPTLC1-201ENST00000262554 NMNAT1Q9HAN9 279 aaPredicted RBP12.2□□□□□ -0.46
SPTLC1-201ENST00000262554 ACTR10Q9NZ32 417 aa12.2□□□□□ -0.46
SPTLC1-201ENST00000262554 ANKMY1Q9P2S6 941 aa12.2□□□□□ -0.46
SPTLC1-201ENST00000262554 PHF11Q9UIL8 331 aa12.2□□□□□ -0.46
SPTLC1-201ENST00000262554 HEMK1Q9Y5R4 338 aaPredicted RBP12.2□□□□□ -0.46
SPTLC1-201ENST00000262554 PRAMEF27A3QJZ7 478 aa12.19□□□□□ -0.46
SPTLC1-201ENST00000262554 FFAR1O14842 300 aa12.19□□□□□ -0.46
SPTLC1-201ENST00000262554 MT-ND2P03891 347 aa12.19□□□□□ -0.46
SPTLC1-201ENST00000262554 HMGN2P05204 90 aaKnown RBP12.19□□□□□ -0.46
SPTLC1-201ENST00000262554 POU2F1P14859 743 aa12.19□□□□□ -0.46
SPTLC1-201ENST00000262554 CCR5P51681 352 aa12.19□□□□□ -0.46
SPTLC1-201ENST00000262554 GP2P55259 537 aaKnown RBP12.19□□□□□ -0.46
SPTLC1-201ENST00000262554 DUSP2Q05923 314 aa12.19□□□□□ -0.46
SPTLC1-201ENST00000262554 NFATC3Q12968 1075 aa12.19□□□□□ -0.46
SPTLC1-201ENST00000262554 LASP1Q14847 261 aaKnown RBP12.19□□□□□ -0.46
SPTLC1-201ENST00000262554 CEBPEQ15744 281 aa12.19□□□□□ -0.46
SPTLC1-201ENST00000262554 KIAA0895LQ68EN5 471 aa12.19□□□□□ -0.46
SPTLC1-201ENST00000262554 FIGLAQ6QHK4 219 aa12.19□□□□□ -0.46
SPTLC1-201ENST00000262554 DEF8Q6ZN54 512 aa12.19□□□□□ -0.46
SPTLC1-201ENST00000262554 FAM92BQ6ZTR7 304 aa12.19□□□□□ -0.46
SPTLC1-201ENST00000262554 VANGL1Q8TAA9 524 aaPredicted RBP12.19□□□□□ -0.46
SPTLC1-201ENST00000262554 MIPOL1Q8TD10 442 aa12.19□□□□□ -0.46
SPTLC1-201ENST00000262554 GPBAR1Q8TDU6 330 aa12.19□□□□□ -0.46
SPTLC1-201ENST00000262554 GTPBP3Q969Y2 492 aaKnown RBP12.19□□□□□ -0.46
SPTLC1-201ENST00000262554 TM4SF19Q96DZ7 209 aa12.19□□□□□ -0.46
SPTLC1-201ENST00000262554 DTNBP1Q96EV8 351 aa12.19□□□□□ -0.46
SPTLC1-201ENST00000262554 OR2A5Q96R48 311 aa12.19□□□□□ -0.46
SPTLC1-201ENST00000262554 SERINC2Q96SA4 455 aa12.19□□□□□ -0.46
SPTLC1-201ENST00000262554 YIPF4Q9BSR8 244 aa12.19□□□□□ -0.46
SPTLC1-201ENST00000262554 BTBD2Q9BX70 525 aa12.19□□□□□ -0.46
SPTLC1-201ENST00000262554 GSDMCQ9BYG8 508 aa12.19□□□□□ -0.46
SPTLC1-201ENST00000262554 BCL2L10Q9HD36 194 aa12.19□□□□□ -0.46
SPTLC1-201ENST00000262554 IMPAD1Q9NX62 359 aa12.19□□□□□ -0.46
SPTLC1-201ENST00000262554 ARHGEF17Q96PE2 2063 aaPredicted RBP12.19□□□□□ -0.46
SPTLC1-201ENST00000262554 SCN3AQ9NY46 2000 aa12.19□□□□□ -0.46
SPTLC1-201ENST00000262554 A0A0G2JPF8 293 aa12.19□□□□□ -0.46
SPTLC1-201ENST00000262554 A0A0J9YVX5 310 aa12.19□□□□□ -0.46
SPTLC1-201ENST00000262554 HNRNPCL2B2RXH8 293 aa12.19□□□□□ -0.46
SPTLC1-201ENST00000262554 HNRNPCL3B7ZW38 293 aa12.19□□□□□ -0.46
SPTLC1-201ENST00000262554 FAAHO00519 579 aa12.19□□□□□ -0.46
SPTLC1-201ENST00000262554 OXSR1O95747 527 aaPredicted RBP12.19□□□□□ -0.46
SPTLC1-201ENST00000262554 GASTP01350 101 aa12.19□□□□□ -0.46
SPTLC1-201ENST00000262554 IGHV4-34P06331 123 aa12.19□□□□□ -0.46
SPTLC1-201ENST00000262554 H1F0P07305 194 aaKnown RBP12.19□□□□□ -0.46
SPTLC1-201ENST00000262554 HNRNPCL4P0DMR1 293 aa12.19□□□□□ -0.46
SPTLC1-201ENST00000262554 ZNF10P21506 573 aaPredicted RBP12.19□□□□□ -0.46
SPTLC1-201ENST00000262554 CPN2P22792 545 aa12.19□□□□□ -0.46
SPTLC1-201ENST00000262554 BMP8BP34820 402 aa12.19□□□□□ -0.46
SPTLC1-201ENST00000262554 PTGER1P34995 402 aa12.19□□□□□ -0.46
SPTLC1-201ENST00000262554 MAP2K4P45985 399 aa12.19□□□□□ -0.46
SPTLC1-201ENST00000262554 IDH2P48735 452 aaKnown RBP12.19□□□□□ -0.46
SPTLC1-201ENST00000262554 TEKQ02763 1124 aa12.19□□□□□ -0.46
SPTLC1-201ENST00000262554 FOXD4Q12950 439 aaPredicted RBP12.19□□□□□ -0.46
SPTLC1-201ENST00000262554 DCTN2Q13561 401 aaKnown RBP12.19□□□□□ -0.46
SPTLC1-201ENST00000262554 DCST1Q5T197 706 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms