RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 IFRD1O00458 451 aaPredicted RBP11.26□□□□□ -0.61
CCNA1-201ENST00000255465 SCELO95171 688 aa11.26□□□□□ -0.61
CCNA1-201ENST00000255465 LPLP06858 475 aa11.26□□□□□ -0.61
CCNA1-201ENST00000255465 HIST1H2AGP0C0S8 130 aaPredicted RBP11.26□□□□□ -0.61
CCNA1-201ENST00000255465 SLC2A2P11168 524 aaPredicted RBP11.26□□□□□ -0.61
CCNA1-201ENST00000255465 TYRP14679 529 aa11.26□□□□□ -0.61
CCNA1-201ENST00000255465 HIST1H2ADP20671 130 aa11.26□□□□□ -0.61
CCNA1-201ENST00000255465 ITPKAP23677 461 aa11.26□□□□□ -0.61
CCNA1-201ENST00000255465 AZGP1P25311 298 aaKnown RBP11.26□□□□□ -0.61
CCNA1-201ENST00000255465 LCN1P31025 176 aa11.26□□□□□ -0.61
CCNA1-201ENST00000255465 PXNP49023 591 aaPredicted RBP11.26□□□□□ -0.61
CCNA1-201ENST00000255465 MAZP56270 477 aaKnown RBP11.26□□□□□ -0.61
CCNA1-201ENST00000255465 OGDHQ02218 1023 aa11.26□□□□□ -0.61
CCNA1-201ENST00000255465 ALKBH1Q13686 389 aaKnown RBP11.26□□□□□ -0.61
CCNA1-201ENST00000255465 SMCO1Q147U7 214 aa11.26□□□□□ -0.61
CCNA1-201ENST00000255465 SDHAF4Q5VUM1 108 aa11.26□□□□□ -0.61
CCNA1-201ENST00000255465 HIST2H2AA3Q6FI13 130 aa11.26□□□□□ -0.61
CCNA1-201ENST00000255465 SEZ6L2Q6UXD5 910 aa11.26□□□□□ -0.61
CCNA1-201ENST00000255465 PAQR9Q6ZVX9 377 aa11.26□□□□□ -0.61
CCNA1-201ENST00000255465 SPATA19Q7Z5L4 167 aa11.26□□□□□ -0.61
CCNA1-201ENST00000255465 KIAA0907Q7Z7F0 614 aaPredicted RBP11.26□□□□□ -0.61
CCNA1-201ENST00000255465 SCN4BQ8IWT1 228 aa11.26□□□□□ -0.61
CCNA1-201ENST00000255465 FAM217AQ8IXS0 508 aa11.26□□□□□ -0.61
CCNA1-201ENST00000255465 GJD3Q8N144 294 aa11.26□□□□□ -0.61
CCNA1-201ENST00000255465 NANOGP1Q8N7R0 232 aa11.26□□□□□ -0.61
CCNA1-201ENST00000255465 AVL9Q8NBF6 648 aa11.26□□□□□ -0.61
CCNA1-201ENST00000255465 TCTEX1D2Q8WW35 142 aa11.26□□□□□ -0.61
CCNA1-201ENST00000255465 ISG20Q96AZ6 181 aaKnown RBP11.26□□□□□ -0.61
CCNA1-201ENST00000255465 HIST1H2AHQ96KK5 128 aa11.26□□□□□ -0.61
CCNA1-201ENST00000255465 C7orf34Q96L11 122 aa11.26□□□□□ -0.61
CCNA1-201ENST00000255465 MYADMQ96S97 322 aa11.26□□□□□ -0.61
CCNA1-201ENST00000255465 GPR22Q99680 433 aa11.26□□□□□ -0.61
CCNA1-201ENST00000255465 HIST1H2AJQ99878 128 aa11.26□□□□□ -0.61
CCNA1-201ENST00000255465 TMEM43Q9BTV4 400 aa11.26□□□□□ -0.61
CCNA1-201ENST00000255465 NTMT1Q9BV86 223 aa11.26□□□□□ -0.61
CCNA1-201ENST00000255465 COL25A1Q9BXS0 654 aaPredicted RBP11.26□□□□□ -0.61
CCNA1-201ENST00000255465 KLHL31Q9H511 634 aa11.26□□□□□ -0.61
CCNA1-201ENST00000255465 ANKRA2Q9H9E1 313 aa11.26□□□□□ -0.61
CCNA1-201ENST00000255465 VSX1Q9NZR4 365 aaPredicted RBP11.26□□□□□ -0.61
CCNA1-201ENST00000255465 NLKQ9UBE8 527 aa11.26□□□□□ -0.61
CCNA1-201ENST00000255465 ZNF222Q9UK12 451 aa11.26□□□□□ -0.61
CCNA1-201ENST00000255465 PLEKHA6Q9Y2H5 1048 aa11.26□□□□□ -0.61
CCNA1-201ENST00000255465 PKP3Q9Y446 797 aa11.26□□□□□ -0.61
CCNA1-201ENST00000255465 TRBV23-1A0A0A0MS06 115 aa11.25□□□□□ -0.61
CCNA1-201ENST00000255465 PRAMEF33A0A0G2JMD5 474 aa11.25□□□□□ -0.61
CCNA1-201ENST00000255465 ERI2A8K979 691 aaKnown RBP11.25□□□□□ -0.61
CCNA1-201ENST00000255465 FPGTO14772 594 aa11.25□□□□□ -0.61
CCNA1-201ENST00000255465 TCAPO15273 167 aa11.25□□□□□ -0.61
CCNA1-201ENST00000255465 LZTS3O60299 673 aaPredicted RBP11.25□□□□□ -0.61
CCNA1-201ENST00000255465 PLOD3O60568 738 aa11.25□□□□□ -0.61
CCNA1-201ENST00000255465 PRAMEF10O60809 474 aa11.25□□□□□ -0.61
CCNA1-201ENST00000255465 MT-ND1P03886 318 aa11.25□□□□□ -0.61
CCNA1-201ENST00000255465 NCK1P16333 377 aa11.25□□□□□ -0.61
CCNA1-201ENST00000255465 GNA15P30679 374 aa11.25□□□□□ -0.61
CCNA1-201ENST00000255465 SDC2P34741 201 aa11.25□□□□□ -0.61
CCNA1-201ENST00000255465 CCR2P41597 374 aa11.25□□□□□ -0.61
CCNA1-201ENST00000255465 RBP2P50120 134 aa11.25□□□□□ -0.61
CCNA1-201ENST00000255465 CDH6P55285 790 aa11.25□□□□□ -0.61
CCNA1-201ENST00000255465 ILF3Q12906 894 aaKnown RBP eCLIP11.25□□□□□ -0.61
CCNA1-201ENST00000255465 NR6A1Q15406 480 aa11.25□□□□□ -0.61
CCNA1-201ENST00000255465 PTPN20Q4JDL3 420 aa11.25□□□□□ -0.61
CCNA1-201ENST00000255465 HECTD3Q5T447 861 aa11.25□□□□□ -0.61
CCNA1-201ENST00000255465 GPRC6AQ5T6X5 926 aa11.25□□□□□ -0.61
CCNA1-201ENST00000255465 SH3PXD2AQ5TCZ1 1133 aa11.25□□□□□ -0.61
CCNA1-201ENST00000255465 LIN54Q6MZP7 749 aa11.25□□□□□ -0.61
CCNA1-201ENST00000255465 PDZD4Q76G19 769 aaPredicted RBP11.25□□□□□ -0.61
CCNA1-201ENST00000255465 ANKRD46Q86W74 232 aa11.25□□□□□ -0.61
CCNA1-201ENST00000255465 ATCAYQ86WG3 371 aa11.25□□□□□ -0.61
CCNA1-201ENST00000255465 DNAJC22Q8N4W6 341 aa11.25□□□□□ -0.61
CCNA1-201ENST00000255465 NKAIN3Q8N8D7 197 aa11.25□□□□□ -0.61
CCNA1-201ENST00000255465 ZNF454Q8N9F8 522 aa11.25□□□□□ -0.61
CCNA1-201ENST00000255465 WDR20Q8TBZ3 569 aa11.25□□□□□ -0.61
CCNA1-201ENST00000255465 ACSF2Q96CM8 615 aaPredicted RBP11.25□□□□□ -0.61
CCNA1-201ENST00000255465 TCEAL4Q96EI5 215 aa11.25□□□□□ -0.61
CCNA1-201ENST00000255465 ZBED6CLQ96FA7 236 aaPredicted RBP11.25□□□□□ -0.61
CCNA1-201ENST00000255465 OTUB1Q96FW1 271 aaPredicted RBP11.25□□□□□ -0.61
CCNA1-201ENST00000255465 TMEM176AQ96HP8 235 aa11.25□□□□□ -0.61
CCNA1-201ENST00000255465 DIRAS2Q96HU8 199 aa11.25□□□□□ -0.61
CCNA1-201ENST00000255465 MED10Q9BTT4 135 aa11.25□□□□□ -0.61
CCNA1-201ENST00000255465 DUSP26Q9BV47 211 aa11.25□□□□□ -0.61
CCNA1-201ENST00000255465 CDCA4Q9BXL8 241 aa11.25□□□□□ -0.61
CCNA1-201ENST00000255465 ZDHHC5Q9C0B5 715 aa11.25□□□□□ -0.61
CCNA1-201ENST00000255465 TMPRSS5Q9H3S3 457 aa11.25□□□□□ -0.61
CCNA1-201ENST00000255465 ZFP57Q9NU63 452 aa11.25□□□□□ -0.61
CCNA1-201ENST00000255465 TMEM30AQ9NV96 361 aa11.25□□□□□ -0.61
CCNA1-201ENST00000255465 SLCO1C1Q9NYB5 712 aa11.25□□□□□ -0.61
CCNA1-201ENST00000255465 MRPS23Q9Y3D9 190 aaKnown RBP11.25□□□□□ -0.61
CCNA1-201ENST00000255465 NUP210Q8TEM1 1887 aaPredicted RBP11.25□□□□□ -0.61
CCNA1-201ENST00000255465 MYO16Q9Y6X6 1858 aa11.25□□□□□ -0.61
CCNA1-201ENST00000255465 TEX13CA0A0J9YWL9 993 aa11.25□□□□□ -0.61
CCNA1-201ENST00000255465 NRG2O14511 850 aaPredicted RBP11.25□□□□□ -0.61
CCNA1-201ENST00000255465 ZNF197O14709 1029 aa11.25□□□□□ -0.61
CCNA1-201ENST00000255465 SDC3O75056 442 aa11.25□□□□□ -0.61
CCNA1-201ENST00000255465 WBP4O75554 376 aaKnown RBP11.25□□□□□ -0.61
CCNA1-201ENST00000255465 CREG1O75629 220 aa11.25□□□□□ -0.61
CCNA1-201ENST00000255465 SC5DO75845 299 aa11.25□□□□□ -0.61
CCNA1-201ENST00000255465 PEX11BO96011 259 aa11.25□□□□□ -0.61
CCNA1-201ENST00000255465 SULT1A3P0DMM9 295 aa11.25□□□□□ -0.61
CCNA1-201ENST00000255465 SULT1A4P0DMN0 295 aa11.25□□□□□ -0.61
CCNA1-201ENST00000255465 SPP1P10451 314 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms