RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 TIGD4Q8IY51 512 aa9.58□□□□□ -0.88
COPB1-201ENST00000249923 IQCF1Q8N6M8 205 aa9.58□□□□□ -0.88
COPB1-201ENST00000249923 MRPL43Q8N983 215 aaKnown RBP9.58□□□□□ -0.88
COPB1-201ENST00000249923 ASCC1Q8N9N2 400 aaKnown RBP9.58□□□□□ -0.88
COPB1-201ENST00000249923 LINC01555Q8NAE3 123 aa9.58□□□□□ -0.88
COPB1-201ENST00000249923 SLC7A13Q8TCU3 470 aa9.58□□□□□ -0.88
COPB1-201ENST00000249923 REPS1Q96D71 796 aa9.58□□□□□ -0.88
COPB1-201ENST00000249923 ART5Q96L15 291 aa9.58□□□□□ -0.88
COPB1-201ENST00000249923 DHRS1Q96LJ7 313 aa9.58□□□□□ -0.88
COPB1-201ENST00000249923 PHOX2BQ99453 314 aa9.58□□□□□ -0.88
COPB1-201ENST00000249923 POLMQ9NP87 494 aaPredicted RBP9.58□□□□□ -0.88
COPB1-201ENST00000249923 MAN2C1Q9NTJ4 1040 aa9.58□□□□□ -0.88
COPB1-201ENST00000249923 TAC3Q9UHF0 121 aa9.58□□□□□ -0.88
COPB1-201ENST00000249923 PRELID1Q9Y255 219 aa9.58□□□□□ -0.88
COPB1-201ENST00000249923 ARRDC5A6NEK1 342 aa9.58□□□□□ -0.88
COPB1-201ENST00000249923 H3BQ06 376 aaPredicted RBP9.58□□□□□ -0.88
COPB1-201ENST00000249923 LZTS3O60299 673 aaPredicted RBP9.58□□□□□ -0.88
COPB1-201ENST00000249923 STATHP02808 62 aa9.58□□□□□ -0.88
COPB1-201ENST00000249923 UQCRC2P22695 453 aa9.58□□□□□ -0.88
COPB1-201ENST00000249923 HSPB3Q12988 150 aa9.58□□□□□ -0.88
COPB1-201ENST00000249923 SYPL1Q16563 259 aa9.58□□□□□ -0.88
COPB1-201ENST00000249923 C1orf53Q5VUE5 145 aa9.58□□□□□ -0.88
COPB1-201ENST00000249923 PLAG1Q6DJT9 500 aa9.58□□□□□ -0.88
COPB1-201ENST00000249923 REEP3Q6NUK4 255 aa9.58□□□□□ -0.88
COPB1-201ENST00000249923 PAMR1Q6UXH9 720 aa9.58□□□□□ -0.88
COPB1-201ENST00000249923 MEX3DQ86XN8 651 aaKnown RBP9.58□□□□□ -0.88
COPB1-201ENST00000249923 FAM20CQ8IXL6 584 aa9.58□□□□□ -0.88
COPB1-201ENST00000249923 OR9Q1Q8NGQ5 310 aa9.58□□□□□ -0.88
COPB1-201ENST00000249923 DIRAS2Q96HU8 199 aa9.58□□□□□ -0.88
COPB1-201ENST00000249923 FYTTD1Q96QD9 318 aaKnown RBP9.58□□□□□ -0.88
COPB1-201ENST00000249923 MS4A8Q9BY19 250 aa9.58□□□□□ -0.88
COPB1-201ENST00000249923 TBC1D24Q9ULP9 559 aa9.58□□□□□ -0.88
COPB1-201ENST00000249923 SLC9A8Q9Y2E8 581 aa9.58□□□□□ -0.88
COPB1-201ENST00000249923 IRAK3Q9Y616 596 aa9.58□□□□□ -0.88
COPB1-201ENST00000249923 A0A0G2JN53 185 aa9.58□□□□□ -0.88
COPB1-201ENST00000249923 CCDC182A6NF36 153 aa9.58□□□□□ -0.88
COPB1-201ENST00000249923 HNRNPCL2B2RXH8 293 aa9.58□□□□□ -0.88
COPB1-201ENST00000249923 DYRK3O43781 588 aa9.58□□□□□ -0.88
COPB1-201ENST00000249923 LCMT2O60294 686 aaKnown RBP9.58□□□□□ -0.88
COPB1-201ENST00000249923 CSO75390 466 aaKnown RBP9.58□□□□□ -0.88
COPB1-201ENST00000249923 TSPAN19P0C672 248 aa9.58□□□□□ -0.88
COPB1-201ENST00000249923 ADRB3P13945 408 aa9.58□□□□□ -0.88
COPB1-201ENST00000249923 RPS19P39019 145 aaKnown RBP9.58□□□□□ -0.88
COPB1-201ENST00000249923 HTRA4P83105 476 aaPredicted RBP9.58□□□□□ -0.88
COPB1-201ENST00000249923 PRKCDQ05655 676 aa9.58□□□□□ -0.88
COPB1-201ENST00000249923 DUSP2Q05923 314 aa9.58□□□□□ -0.88
COPB1-201ENST00000249923 PGBD2Q6P3X8 592 aa9.58□□□□□ -0.88
COPB1-201ENST00000249923 ZNF517Q6ZMY9 492 aaPredicted RBP9.58□□□□□ -0.88
COPB1-201ENST00000249923 MACROD1Q9BQ69 325 aa9.58□□□□□ -0.88
COPB1-201ENST00000249923 SP140LQ9H930 580 aa9.58□□□□□ -0.88
COPB1-201ENST00000249923 A4GALTQ9NPC4 353 aa9.58□□□□□ -0.88
COPB1-201ENST00000249923 COMMD3Q9UBI1 195 aa9.58□□□□□ -0.88
COPB1-201ENST00000249923 ACAD8Q9UKU7 415 aa9.58□□□□□ -0.88
COPB1-201ENST00000249923 A4GNTQ9UNA3 340 aa9.58□□□□□ -0.88
COPB1-201ENST00000249923 MRPS7Q9Y2R9 242 aaKnown RBP9.58□□□□□ -0.88
COPB1-201ENST00000249923 KLK4Q9Y5K2 254 aa9.58□□□□□ -0.88
COPB1-201ENST00000249923 A3GALT2U3KPV4 340 aa9.58□□□□□ -0.88
COPB1-201ENST00000249923 ANHXE9PGG2 379 aa9.57□□□□□ -0.88
COPB1-201ENST00000249923 IFNW1P05000 195 aa9.57□□□□□ -0.88
COPB1-201ENST00000249923 PTPN2P17706 415 aa9.57□□□□□ -0.88
COPB1-201ENST00000249923 ETV6P41212 452 aa9.57□□□□□ -0.88
COPB1-201ENST00000249923 GPR1P46091 355 aa9.57□□□□□ -0.88
COPB1-201ENST00000249923 VEGFBP49765 207 aa9.57□□□□□ -0.88
COPB1-201ENST00000249923 PIN1Q13526 163 aaPredicted RBP9.57□□□□□ -0.88
COPB1-201ENST00000249923 LRIT3Q3SXY7 679 aa9.57□□□□□ -0.88
COPB1-201ENST00000249923 KHDRBS2Q5VWX1 349 aaKnown RBP9.57□□□□□ -0.88
COPB1-201ENST00000249923 PNCKQ6P2M8 343 aa9.57□□□□□ -0.88
COPB1-201ENST00000249923 RAB43Q86YS6 212 aa9.57□□□□□ -0.88
COPB1-201ENST00000249923 MMAAQ8IVH4 418 aaKnown RBP9.57□□□□□ -0.88
COPB1-201ENST00000249923 ELMOD2Q8IZ81 293 aa9.57□□□□□ -0.88
COPB1-201ENST00000249923 HCAR2Q8TDS4 363 aa9.57□□□□□ -0.88
COPB1-201ENST00000249923 ZNF707Q96C28 371 aaPredicted RBP9.57□□□□□ -0.88
COPB1-201ENST00000249923 LRIG1Q96JA1 1093 aa9.57□□□□□ -0.88
COPB1-201ENST00000249923 TEFMQ96QE5 360 aaKnown RBP9.57□□□□□ -0.88
COPB1-201ENST00000249923 BEX1Q9HBH7 125 aa9.57□□□□□ -0.88
COPB1-201ENST00000249923 ANKHQ9HCJ1 492 aa9.57□□□□□ -0.88
COPB1-201ENST00000249923 MIEF1Q9NQG6 463 aa9.57□□□□□ -0.88
COPB1-201ENST00000249923 ZC4H2Q9NQZ6 224 aa9.57□□□□□ -0.88
COPB1-201ENST00000249923 ASF1AQ9Y294 204 aa9.57□□□□□ -0.88
COPB1-201ENST00000249923 C2orf16Q68DN1 1984 aa9.57□□□□□ -0.88
COPB1-201ENST00000249923 A0A1B0GVC2 190 aa9.57□□□□□ -0.88
COPB1-201ENST00000249923 A6NIN4 97 aa9.57□□□□□ -0.88
COPB1-201ENST00000249923 M0R3H8 397 aa9.57□□□□□ -0.88
COPB1-201ENST00000249923 NME6O75414 186 aaPredicted RBP9.57□□□□□ -0.88
COPB1-201ENST00000249923 SRPRAP08240 638 aaKnown RBP9.57□□□□□ -0.88
COPB1-201ENST00000249923 CCNYL3P0C7X3 344 aa9.57□□□□□ -0.88
COPB1-201ENST00000249923 PSKH1P11801 424 aa9.57□□□□□ -0.88
COPB1-201ENST00000249923 ITGA2P17301 1181 aa9.57□□□□□ -0.88
COPB1-201ENST00000249923 ITGB7P26010 798 aa9.57□□□□□ -0.88
COPB1-201ENST00000249923 IFNA8P32881 189 aa9.57□□□□□ -0.88
COPB1-201ENST00000249923 HTR2BP41595 481 aa9.57□□□□□ -0.88
COPB1-201ENST00000249923 CASP3P42574 277 aa9.57□□□□□ -0.88
COPB1-201ENST00000249923 CRYBB2P43320 205 aa9.57□□□□□ -0.88
COPB1-201ENST00000249923 GAS1P54826 345 aa9.57□□□□□ -0.88
COPB1-201ENST00000249923 DPTQ07507 201 aa9.57□□□□□ -0.88
COPB1-201ENST00000249923 MRPL28Q13084 256 aaKnown RBP9.57□□□□□ -0.88
COPB1-201ENST00000249923 ZNF181Q2M3W8 571 aa9.57□□□□□ -0.88
COPB1-201ENST00000249923 NXNL2Q5VZ03 156 aa9.57□□□□□ -0.88
COPB1-201ENST00000249923 C12orf73Q69YU5 71 aa9.57□□□□□ -0.88
COPB1-201ENST00000249923 ZNF793Q6ZN11 406 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 115.9 ms