RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 ACSS1Q9NUB1 689 aaPredicted RBP23.6■■□□□ 1.37
RUNDC3A-201ENST00000225441 CRNNQ9UBG3 495 aaPredicted RBP23.6■■□□□ 1.37
RUNDC3A-201ENST00000225441 IGLON5A6NGN9 336 aa23.59■■□□□ 1.37
RUNDC3A-201ENST00000225441 MFN2O95140 757 aa23.59■■□□□ 1.37
RUNDC3A-201ENST00000225441 TMED10P49755 219 aaKnown RBP23.59■■□□□ 1.37
RUNDC3A-201ENST00000225441 MAPK12P53778 367 aa23.59■■□□□ 1.37
RUNDC3A-201ENST00000225441 DNASE1L3Q13609 305 aa23.59■■□□□ 1.37
RUNDC3A-201ENST00000225441 UBXN2BQ14CS0 331 aa23.59■■□□□ 1.37
RUNDC3A-201ENST00000225441 KRT73Q86Y46 540 aa23.59■■□□□ 1.37
RUNDC3A-201ENST00000225441 OR14C36Q8NHC7 312 aa23.59■■□□□ 1.37
RUNDC3A-201ENST00000225441 GTPBP3Q969Y2 492 aaKnown RBP23.59■■□□□ 1.37
RUNDC3A-201ENST00000225441 TM4SF18Q96CE8 201 aa23.59■■□□□ 1.37
RUNDC3A-201ENST00000225441 TRNT1Q96Q11 434 aaKnown RBP23.59■■□□□ 1.37
RUNDC3A-201ENST00000225441 C6orf62Q9GZU0 229 aaPredicted RBP23.59■■□□□ 1.37
RUNDC3A-201ENST00000225441 ZNF229Q9UJW7 825 aa23.59■■□□□ 1.37
RUNDC3A-201ENST00000225441 NCKAP1Q9Y2A7 1128 aa23.59■■□□□ 1.37
RUNDC3A-201ENST00000225441 ACADMP11310 421 aa23.59■■□□□ 1.37
RUNDC3A-201ENST00000225441 GABRG2P18507 467 aa23.59■■□□□ 1.37
RUNDC3A-201ENST00000225441 ENDOUP21128 410 aaKnown RBP23.59■■□□□ 1.37
RUNDC3A-201ENST00000225441 ALDH6A1Q02252 535 aaKnown RBP23.59■■□□□ 1.37
RUNDC3A-201ENST00000225441 PUM1Q14671 1186 aaKnown RBP eCLIP23.59■■□□□ 1.37
RUNDC3A-201ENST00000225441 SLC38A5Q8WUX1 472 aa23.59■■□□□ 1.37
RUNDC3A-201ENST00000225441 TXNDC15Q96J42 360 aa23.59■■□□□ 1.37
RUNDC3A-201ENST00000225441 TAPBPLQ9BX59 468 aa23.59■■□□□ 1.37
RUNDC3A-201ENST00000225441 TAS2R7Q9NYW3 318 aa23.59■■□□□ 1.37
RUNDC3A-201ENST00000225441 ACAD8Q9UKU7 415 aa23.59■■□□□ 1.37
RUNDC3A-201ENST00000225441 ASF1AQ9Y294 204 aa23.59■■□□□ 1.37
RUNDC3A-201ENST00000225441 TLR4O00206 839 aa23.58■■□□□ 1.37
RUNDC3A-201ENST00000225441 HAT1O14929 419 aa23.58■■□□□ 1.37
RUNDC3A-201ENST00000225441 CSTF2P33240 577 aaKnown RBP eCLIP23.58■■□□□ 1.37
RUNDC3A-201ENST00000225441 CNR2P34972 360 aa23.58■■□□□ 1.37
RUNDC3A-201ENST00000225441 TGFBR1P36897 503 aa23.58■■□□□ 1.37
RUNDC3A-201ENST00000225441 ADPRHP54922 357 aa23.58■■□□□ 1.37
RUNDC3A-201ENST00000225441 MANFP55145 182 aaKnown RBP23.58■■□□□ 1.37
RUNDC3A-201ENST00000225441 CASP9P55211 416 aa23.58■■□□□ 1.37
RUNDC3A-201ENST00000225441 PCBP4P57723 403 aaKnown RBP23.58■■□□□ 1.37
RUNDC3A-201ENST00000225441 DEFA1P59665 94 aa23.58■■□□□ 1.37
RUNDC3A-201ENST00000225441 DEFA3P59666 94 aa23.58■■□□□ 1.37
RUNDC3A-201ENST00000225441 DUSP7Q16829 419 aa23.58■■□□□ 1.37
RUNDC3A-201ENST00000225441 DCST1Q5T197 706 aa23.58■■□□□ 1.37
RUNDC3A-201ENST00000225441 ADAMTSL4Q6UY14 1074 aa23.58■■□□□ 1.37
RUNDC3A-201ENST00000225441 NCCRP1Q6ZVX7 275 aaPredicted RBP23.58■■□□□ 1.37
RUNDC3A-201ENST00000225441 SIX5Q8N196 739 aa23.58■■□□□ 1.37
RUNDC3A-201ENST00000225441 FLCNQ8NFG4 579 aa23.58■■□□□ 1.37
RUNDC3A-201ENST00000225441 ZBED6CLQ96FA7 236 aaPredicted RBP23.58■■□□□ 1.37
RUNDC3A-201ENST00000225441 OR51E2Q9H255 320 aa23.58■■□□□ 1.37
RUNDC3A-201ENST00000225441 C3orf14Q9HBI5 128 aa23.58■■□□□ 1.37
RUNDC3A-201ENST00000225441 POLMQ9NP87 494 aaPredicted RBP23.58■■□□□ 1.37
RUNDC3A-201ENST00000225441 INIPQ9NRY2 104 aa23.58■■□□□ 1.37
RUNDC3A-201ENST00000225441 K7ESM1 405 aa23.57■■□□□ 1.36
RUNDC3A-201ENST00000225441 PLPP1O14494 284 aa23.57■■□□□ 1.36
RUNDC3A-201ENST00000225441 GRK5P34947 590 aa23.57■■□□□ 1.36
RUNDC3A-201ENST00000225441 BSGP35613 385 aa23.57■■□□□ 1.36
RUNDC3A-201ENST00000225441 CCR8P51685 355 aa23.57■■□□□ 1.36
RUNDC3A-201ENST00000225441 MEF2AQ02078 507 aaPredicted RBP23.57■■□□□ 1.36
RUNDC3A-201ENST00000225441 FZD5Q13467 585 aa23.57■■□□□ 1.36
RUNDC3A-201ENST00000225441 AGERQ15109 404 aa23.57■■□□□ 1.36
RUNDC3A-201ENST00000225441 NDUFA9Q16795 377 aa23.57■■□□□ 1.36
RUNDC3A-201ENST00000225441 C12orf73Q69YU5 71 aa23.57■■□□□ 1.36
RUNDC3A-201ENST00000225441 C11orf96Q7Z7L8 435 aa23.57■■□□□ 1.36
RUNDC3A-201ENST00000225441 ATCAYQ86WG3 371 aa23.57■■□□□ 1.36
RUNDC3A-201ENST00000225441 UBALD2Q8IYN6 164 aa23.57■■□□□ 1.36
RUNDC3A-201ENST00000225441 KLHL6Q8WZ60 621 aa23.57■■□□□ 1.36
RUNDC3A-201ENST00000225441 COX14Q96I36 57 aa23.57■■□□□ 1.36
RUNDC3A-201ENST00000225441 ZNF354BQ96LW1 612 aa23.57■■□□□ 1.36
RUNDC3A-201ENST00000225441 CCDC32Q9BV29 185 aa23.57■■□□□ 1.36
RUNDC3A-201ENST00000225441 ZNF717Q9BY31 904 aaPredicted RBP23.57■■□□□ 1.36
RUNDC3A-201ENST00000225441 ABCB10Q9NRK6 738 aa23.57■■□□□ 1.36
RUNDC3A-201ENST00000225441 REV1Q9UBZ9 1251 aa23.57■■□□□ 1.36
RUNDC3A-201ENST00000225441 ZFR2Q9UPR6 939 aaKnown RBP23.57■■□□□ 1.36
RUNDC3A-201ENST00000225441 RPL36Q9Y3U8 105 aaKnown RBP23.57■■□□□ 1.36
RUNDC3A-201ENST00000225441 LOC100506127A0A0U1RQW1 187 aa23.56■■□□□ 1.36
RUNDC3A-201ENST00000225441 SCG5P05408 212 aa23.56■■□□□ 1.36
RUNDC3A-201ENST00000225441 H1F0P07305 194 aaKnown RBP23.56■■□□□ 1.36
RUNDC3A-201ENST00000225441 KCNJ5P48544 419 aa23.56■■□□□ 1.36
RUNDC3A-201ENST00000225441 DGKEP52429 567 aa23.56■■□□□ 1.36
RUNDC3A-201ENST00000225441 REEP5Q00765 189 aa23.56■■□□□ 1.36
RUNDC3A-201ENST00000225441 COX10Q12887 443 aa23.56■■□□□ 1.36
RUNDC3A-201ENST00000225441 NFE2L1Q14494 772 aa23.56■■□□□ 1.36
RUNDC3A-201ENST00000225441 OCLNQ16625 522 aa23.56■■□□□ 1.36
RUNDC3A-201ENST00000225441 SLC25A30Q5SVS4 291 aa23.56■■□□□ 1.36
RUNDC3A-201ENST00000225441 KIAA1161Q6NSJ0 714 aa23.56■■□□□ 1.36
RUNDC3A-201ENST00000225441 CD300LDQ6UXZ3 194 aa23.56■■□□□ 1.36
RUNDC3A-201ENST00000225441 SYT13Q7L8C5 426 aa23.56■■□□□ 1.36
RUNDC3A-201ENST00000225441 AMZ2Q86W34 360 aa23.56■■□□□ 1.36
RUNDC3A-201ENST00000225441 PARP16Q8N5Y8 322 aa23.56■■□□□ 1.36
RUNDC3A-201ENST00000225441 HORMAD2Q8N7B1 307 aa23.56■■□□□ 1.36
RUNDC3A-201ENST00000225441 ZNF740Q8NDX6 193 aa23.56■■□□□ 1.36
RUNDC3A-201ENST00000225441 SMPDL3AQ92484 453 aa23.56■■□□□ 1.36
RUNDC3A-201ENST00000225441 NELL2Q99435 816 aa23.56■■□□□ 1.36
RUNDC3A-201ENST00000225441 FOXQ1Q9C009 403 aa23.56■■□□□ 1.36
RUNDC3A-201ENST00000225441 SNX8Q9Y5X2 465 aa23.56■■□□□ 1.36
RUNDC3A-201ENST00000225441 FAM170BA6NMN3 283 aa23.56■■□□□ 1.36
RUNDC3A-201ENST00000225441 FFAR1O14842 300 aa23.56■■□□□ 1.36
RUNDC3A-201ENST00000225441 RPS21P63220 83 aaKnown RBP23.56■■□□□ 1.36
RUNDC3A-201ENST00000225441 GANABQ14697 944 aaKnown RBP23.56■■□□□ 1.36
RUNDC3A-201ENST00000225441 SPANXN2Q5MJ10 180 aa23.56■■□□□ 1.36
RUNDC3A-201ENST00000225441 STEAP3Q658P3 488 aa23.56■■□□□ 1.36
RUNDC3A-201ENST00000225441 C6orf120Q7Z4R8 191 aa23.56■■□□□ 1.36
RUNDC3A-201ENST00000225441 SNX29P2Q8IUI4 249 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms