RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 PELI2Q9HAT8 420 aa17.58■□□□□ 0.4
CLIP2-201ENST00000223398 IGSF5Q9NSI5 407 aa17.58■□□□□ 0.4
CLIP2-201ENST00000223398 ARL6IP5O75915 188 aa17.57■□□□□ 0.4
CLIP2-201ENST00000223398 NKAPLQ5M9Q1 402 aa17.57■□□□□ 0.4
CLIP2-201ENST00000223398 LMNTD1Q8N9Z9 388 aa17.57■□□□□ 0.4
CLIP2-201ENST00000223398 ADAMTS18Q8TE60 1221 aa17.57■□□□□ 0.4
CLIP2-201ENST00000223398 NEIL2Q969S2 332 aa17.57■□□□□ 0.4
CLIP2-201ENST00000223398 SLC6A17Q9H1V8 727 aa17.57■□□□□ 0.4
CLIP2-201ENST00000223398 SMURF1Q9HCE7 757 aa17.57■□□□□ 0.4
CLIP2-201ENST00000223398 PARPBPQ9NWS1 579 aa17.57■□□□□ 0.4
CLIP2-201ENST00000223398 MYH6P13533 1939 aa17.57■□□□□ 0.4
CLIP2-201ENST00000223398 J3QRK9 145 aa17.57■□□□□ 0.4
CLIP2-201ENST00000223398 PRKCAP17252 672 aa17.57■□□□□ 0.4
CLIP2-201ENST00000223398 PSMB5P28074 263 aa17.57■□□□□ 0.4
CLIP2-201ENST00000223398 MAD2L1BPQ15013 274 aaPredicted RBP17.57■□□□□ 0.4
CLIP2-201ENST00000223398 OCLNQ16625 522 aa17.57■□□□□ 0.4
CLIP2-201ENST00000223398 SLC36A3Q495N2 470 aa17.57■□□□□ 0.4
CLIP2-201ENST00000223398 GRHL2Q6ISB3 625 aa17.57■□□□□ 0.4
CLIP2-201ENST00000223398 GPR137CQ8N3F9 429 aa17.57■□□□□ 0.4
CLIP2-201ENST00000223398 OR5T2Q8NGG2 359 aa17.57■□□□□ 0.4
CLIP2-201ENST00000223398 RAB2BQ8WUD1 216 aa17.57■□□□□ 0.4
CLIP2-201ENST00000223398 CIDECQ96AQ7 238 aaPredicted RBP17.57■□□□□ 0.4
CLIP2-201ENST00000223398 SERINC2Q96SA4 455 aa17.57■□□□□ 0.4
CLIP2-201ENST00000223398 PIP5K1AQ99755 562 aa17.57■□□□□ 0.4
CLIP2-201ENST00000223398 ACAD8Q9UKU7 415 aa17.57■□□□□ 0.4
CLIP2-201ENST00000223398 LDB3O75112 727 aa17.57■□□□□ 0.4
CLIP2-201ENST00000223398 CDRT1O95170 752 aa17.57■□□□□ 0.4
CLIP2-201ENST00000223398 MRPS21P82921 87 aaKnown RBP17.57■□□□□ 0.4
CLIP2-201ENST00000223398 RAB41Q5JT25 222 aa17.57■□□□□ 0.4
CLIP2-201ENST00000223398 TMEM17Q86X19 198 aa17.57■□□□□ 0.4
CLIP2-201ENST00000223398 TREML1Q86YW5 311 aa17.57■□□□□ 0.4
CLIP2-201ENST00000223398 FOXRED2Q8IWF2 684 aa17.57■□□□□ 0.4
CLIP2-201ENST00000223398 CBARPQ8N350 705 aaPredicted RBP17.57■□□□□ 0.4
CLIP2-201ENST00000223398 OR9A2Q8NGT5 310 aa17.57■□□□□ 0.4
CLIP2-201ENST00000223398 RHBDF1Q96CC6 855 aa17.57■□□□□ 0.4
CLIP2-201ENST00000223398 SGTBQ96EQ0 304 aa17.57■□□□□ 0.4
CLIP2-201ENST00000223398 ITPAQ9BY32 194 aa17.57■□□□□ 0.4
CLIP2-201ENST00000223398 SLC39A1Q9NY26 324 aa17.57■□□□□ 0.4
CLIP2-201ENST00000223398 GLS2Q9UI32 602 aa17.57■□□□□ 0.4
CLIP2-201ENST00000223398 USP3Q9Y6I4 520 aa17.57■□□□□ 0.4
CLIP2-201ENST00000223398 XCR1P46094 333 aa17.57■□□□□ 0.4
CLIP2-201ENST00000223398 KANK2Q63ZY3 851 aa17.57■□□□□ 0.4
CLIP2-201ENST00000223398 KIAA0895LQ68EN5 471 aa17.57■□□□□ 0.4
CLIP2-201ENST00000223398 ZNF227Q86WZ6 799 aa17.57■□□□□ 0.4
CLIP2-201ENST00000223398 ALDH16A1Q8IZ83 802 aa17.57■□□□□ 0.4
CLIP2-201ENST00000223398 ZNF548Q8NEK5 533 aaPredicted RBP17.57■□□□□ 0.4
CLIP2-201ENST00000223398 PREBQ9HCU5 417 aa17.57■□□□□ 0.4
CLIP2-201ENST00000223398 NANSQ9NR45 359 aa17.57■□□□□ 0.4
CLIP2-201ENST00000223398 NKX1-2Q9UD57 310 aaPredicted RBP17.57■□□□□ 0.4
CLIP2-201ENST00000223398 ENTPD2Q9Y5L3 495 aa17.57■□□□□ 0.4
CLIP2-201ENST00000223398 LAMB4A4D0S4 1761 aa17.56■□□□□ 0.4
CLIP2-201ENST00000223398 A0A1W2PPK0 400 aa17.56■□□□□ 0.4
CLIP2-201ENST00000223398 H3BML4 177 aa17.56■□□□□ 0.4
CLIP2-201ENST00000223398 MT-ND5P03915 603 aa17.56■□□□□ 0.4
CLIP2-201ENST00000223398 SNU13P55769 128 aaKnown RBP17.56■□□□□ 0.4
CLIP2-201ENST00000223398 EEF1A1P5Q5VTE0 462 aa17.56■□□□□ 0.4
CLIP2-201ENST00000223398 LRFN4Q6PJG9 635 aa17.56■□□□□ 0.4
CLIP2-201ENST00000223398 PAQR9Q6ZVX9 377 aa17.56■□□□□ 0.4
CLIP2-201ENST00000223398 MCATQ8IVS2 390 aaKnown RBP17.56■□□□□ 0.4
CLIP2-201ENST00000223398 OR2T33Q8NG76 320 aa17.56■□□□□ 0.4
CLIP2-201ENST00000223398 TMEM19Q96HH6 336 aa17.56■□□□□ 0.4
CLIP2-201ENST00000223398 METTL21EPA6NDL7 271 aa17.56■□□□□ 0.4
CLIP2-201ENST00000223398 PRAMEF2O60811 474 aa17.56■□□□□ 0.4
CLIP2-201ENST00000223398 GPR37L1O60883 481 aa17.56■□□□□ 0.4
CLIP2-201ENST00000223398 ENTPD6O75354 484 aa17.56■□□□□ 0.4
CLIP2-201ENST00000223398 S1PR1P21453 382 aa17.56■□□□□ 0.4
CLIP2-201ENST00000223398 KDELR2P33947 212 aa17.56■□□□□ 0.4
CLIP2-201ENST00000223398 CLDN8P56748 225 aa17.56■□□□□ 0.4
CLIP2-201ENST00000223398 DSG2Q14126 1118 aa17.56■□□□□ 0.4
CLIP2-201ENST00000223398 TDHQ8IZJ6 230 aa17.56■□□□□ 0.4
CLIP2-201ENST00000223398 MRPL38Q96DV4 380 aaKnown RBP17.56■□□□□ 0.4
CLIP2-201ENST00000223398 SAGE2PA6NJ88 616 aa17.56■□□□□ 0.4
CLIP2-201ENST00000223398 MSX1P28360 303 aa17.56■□□□□ 0.4
CLIP2-201ENST00000223398 C6orf132Q5T0Z8 1188 aa17.56■□□□□ 0.4
CLIP2-201ENST00000223398 ALKAL1Q6UXT8 129 aa17.56■□□□□ 0.4
CLIP2-201ENST00000223398 ZSWIM9Q86XI8 627 aa17.56■□□□□ 0.4
CLIP2-201ENST00000223398 NXPE2Q96DL1 559 aa17.56■□□□□ 0.4
CLIP2-201ENST00000223398 DUSP23Q9BVJ7 150 aa17.56■□□□□ 0.4
CLIP2-201ENST00000223398 TAAR2Q9P1P5 351 aa17.56■□□□□ 0.4
CLIP2-201ENST00000223398 KIR2DS5A0A0G2JLQ3 304 aa17.56■□□□□ 0.4
CLIP2-201ENST00000223398 A0A0G2JNG1 304 aa17.56■□□□□ 0.4
CLIP2-201ENST00000223398 KIR2DS3K7RE56 304 aa17.56■□□□□ 0.4
CLIP2-201ENST00000223398 AREL1O15033 823 aa17.56■□□□□ 0.4
CLIP2-201ENST00000223398 SCGB1D2O95969 90 aa17.56■□□□□ 0.4
CLIP2-201ENST00000223398 ENDOUP21128 410 aaKnown RBP17.56■□□□□ 0.4
CLIP2-201ENST00000223398 RPS3P23396 243 aaKnown RBP eCLIP17.56■□□□□ 0.4
CLIP2-201ENST00000223398 GCGRP47871 477 aa17.56■□□□□ 0.4
CLIP2-201ENST00000223398 KIR2DS5Q14953 304 aa17.56■□□□□ 0.4
CLIP2-201ENST00000223398 PTPRRQ15256 657 aa17.56■□□□□ 0.4
CLIP2-201ENST00000223398 RPS26P11Q5JNZ5 115 aaPredicted RBP17.56■□□□□ 0.4
CLIP2-201ENST00000223398 SWT1Q5T5J6 900 aaKnown RBP17.56■□□□□ 0.4
CLIP2-201ENST00000223398 SLC27A4Q6P1M0 643 aa17.56■□□□□ 0.4
CLIP2-201ENST00000223398 LETMD1Q6P1Q0 360 aa17.56■□□□□ 0.4
CLIP2-201ENST00000223398 VDAC3Q9Y277 283 aa17.56■□□□□ 0.4
CLIP2-201ENST00000223398 FARSAQ9Y285 508 aaKnown RBP17.56■□□□□ 0.4
CLIP2-201ENST00000223398 GGT2P36268 569 aa17.56■□□□□ 0.4
CLIP2-201ENST00000223398 ACADVLP49748 655 aa17.56■□□□□ 0.4
CLIP2-201ENST00000223398 SGSHP51688 502 aa17.56■□□□□ 0.4
CLIP2-201ENST00000223398 LRIF1Q5T3J3 769 aa17.56■□□□□ 0.4
CLIP2-201ENST00000223398 THOC7Q6I9Y2 204 aaKnown RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms