RNA–Protein interactions for RNA: ENST00000222120.7

RAB3D-201, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3D, Length 4,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-201ENST00000222120 FAM78AQ5JUQ0 283 aa12.9□□□□□ -0.34
RAB3D-201ENST00000222120 SNAP47Q5SQN1 464 aa12.9□□□□□ -0.34
RAB3D-201ENST00000222120 GTF2IRD2BQ6EKJ0 949 aa12.9□□□□□ -0.34
RAB3D-201ENST00000222120 BTLAQ7Z6A9 289 aa12.9□□□□□ -0.34
RAB3D-201ENST00000222120 GTF2IRD2Q86UP8 949 aa12.9□□□□□ -0.34
RAB3D-201ENST00000222120 TMC8Q8IU68 726 aa12.9□□□□□ -0.34
RAB3D-201ENST00000222120 PRSS58Q8IYP2 241 aa12.9□□□□□ -0.34
RAB3D-201ENST00000222120 NUP43Q8NFH3 380 aa12.9□□□□□ -0.34
RAB3D-201ENST00000222120 OR2L2Q8NH16 312 aa12.9□□□□□ -0.34
RAB3D-201ENST00000222120 SIRT5Q9NXA8 310 aa12.9□□□□□ -0.34
RAB3D-201ENST00000222120 TMEFF2Q9UIK5 374 aaPredicted RBP12.9□□□□□ -0.34
RAB3D-201ENST00000222120 CDH7Q9ULB5 785 aa12.9□□□□□ -0.34
RAB3D-201ENST00000222120 NDRG2Q9UN36 371 aaKnown RBP12.9□□□□□ -0.34
RAB3D-201ENST00000222120 CCL27Q9Y4X3 112 aa12.9□□□□□ -0.34
RAB3D-201ENST00000222120 CTDSP2O14595 271 aa12.9□□□□□ -0.34
RAB3D-201ENST00000222120 HAT1O14929 419 aa12.9□□□□□ -0.34
RAB3D-201ENST00000222120 PPM1DO15297 605 aa12.9□□□□□ -0.34
RAB3D-201ENST00000222120 TNFRSF21O75509 655 aa12.9□□□□□ -0.34
RAB3D-201ENST00000222120 CDC123O75794 336 aaPredicted RBP12.9□□□□□ -0.34
RAB3D-201ENST00000222120 CHMP24386 653 aa12.9□□□□□ -0.34
RAB3D-201ENST00000222120 AK4P27144 223 aaPredicted RBP12.9□□□□□ -0.34
RAB3D-201ENST00000222120 CERS1P27544 350 aa12.9□□□□□ -0.34
RAB3D-201ENST00000222120 HNRNPA0Q13151 305 aaKnown RBP12.9□□□□□ -0.34
RAB3D-201ENST00000222120 ZFP69Q49AA0 526 aa12.9□□□□□ -0.34
RAB3D-201ENST00000222120 FAM98AQ8NCA5 519 aaKnown RBP12.9□□□□□ -0.34
RAB3D-201ENST00000222120 TRIM43Q96BQ3 446 aaPredicted RBP12.9□□□□□ -0.34
RAB3D-201ENST00000222120 SLC30A2Q9BRI3 323 aa12.9□□□□□ -0.34
RAB3D-201ENST00000222120 SPATA6Q9NWH7 488 aaPredicted RBP12.9□□□□□ -0.34
RAB3D-201ENST00000222120 STOML2Q9UJZ1 356 aa12.9□□□□□ -0.34
RAB3D-201ENST00000222120 ZNF221Q9UK13 617 aa12.9□□□□□ -0.34
RAB3D-201ENST00000222120 ACSL5Q9ULC5 683 aa12.9□□□□□ -0.34
RAB3D-201ENST00000222120 CA5BQ9Y2D0 317 aa12.9□□□□□ -0.34
RAB3D-201ENST00000222120 PLEKHM1Q9Y4G2 1056 aa12.9□□□□□ -0.34
RAB3D-201ENST00000222120 DNMT3AQ9Y6K1 912 aaPredicted RBP12.9□□□□□ -0.34
RAB3D-201ENST00000222120 MICAL3Q7RTP6 2002 aa12.9□□□□□ -0.35
RAB3D-201ENST00000222120 OXSR1O95747 527 aaPredicted RBP12.89□□□□□ -0.35
RAB3D-201ENST00000222120 FUCA1P04066 466 aa12.89□□□□□ -0.35
RAB3D-201ENST00000222120 P2RY2P41231 377 aa12.89□□□□□ -0.35
RAB3D-201ENST00000222120 ZFP36L2P47974 494 aaKnown RBP12.89□□□□□ -0.35
RAB3D-201ENST00000222120 RAB28P51157 221 aa12.89□□□□□ -0.35
RAB3D-201ENST00000222120 PGDP52209 483 aa12.89□□□□□ -0.35
RAB3D-201ENST00000222120 QPRTQ15274 297 aa12.89□□□□□ -0.35
RAB3D-201ENST00000222120 ZNHIT3Q15649 155 aaPredicted RBP12.89□□□□□ -0.35
RAB3D-201ENST00000222120 NNATQ16517 81 aa12.89□□□□□ -0.35
RAB3D-201ENST00000222120 ZSWIM7Q19AV6 140 aa12.89□□□□□ -0.35
RAB3D-201ENST00000222120 FAM83HQ6ZRV2 1179 aaPredicted RBP12.89□□□□□ -0.35
RAB3D-201ENST00000222120 USP51Q70EK9 711 aa12.89□□□□□ -0.35
RAB3D-201ENST00000222120 PDZD3Q86UT5 571 aa12.89□□□□□ -0.35
RAB3D-201ENST00000222120 RAB43Q86YS6 212 aa12.89□□□□□ -0.35
RAB3D-201ENST00000222120 SLC30A8Q8IWU4 369 aa12.89□□□□□ -0.35
RAB3D-201ENST00000222120 TTLQ8NG68 377 aa12.89□□□□□ -0.35
RAB3D-201ENST00000222120 WDR20Q8TBZ3 569 aa12.89□□□□□ -0.35
RAB3D-201ENST00000222120 OR5M11Q96RB7 305 aa12.89□□□□□ -0.35
RAB3D-201ENST00000222120 SLC52A3Q9NQ40 469 aa12.89□□□□□ -0.35
RAB3D-201ENST00000222120 ASIC5Q9NY37 505 aa12.89□□□□□ -0.35
RAB3D-201ENST00000222120 CARD8Q9Y2G2 431 aa12.89□□□□□ -0.35
RAB3D-201ENST00000222120 IFT52Q9Y366 437 aa12.89□□□□□ -0.35
RAB3D-201ENST00000222120 SNX11Q9Y5W9 270 aa12.89□□□□□ -0.35
RAB3D-201ENST00000222120 A8MU76 341 aa12.89□□□□□ -0.35
RAB3D-201ENST00000222120 OR2B6P58173 313 aa12.89□□□□□ -0.35
RAB3D-201ENST00000222120 SLC35A2P78381 396 aa12.89□□□□□ -0.35
RAB3D-201ENST00000222120 MLIPQ5VWP3 458 aa12.89□□□□□ -0.35
RAB3D-201ENST00000222120 ZNF776Q68DI1 518 aaPredicted RBP12.89□□□□□ -0.35
RAB3D-201ENST00000222120 PNCKQ6P2M8 343 aa12.89□□□□□ -0.35
RAB3D-201ENST00000222120 METTL4Q8N3J2 472 aa12.89□□□□□ -0.35
RAB3D-201ENST00000222120 SPPL3Q8TCT6 385 aa12.89□□□□□ -0.35
RAB3D-201ENST00000222120 UFD1Q92890 307 aa12.89□□□□□ -0.35
RAB3D-201ENST00000222120 SPATA9Q9BWV2 254 aa12.89□□□□□ -0.35
RAB3D-201ENST00000222120 MYNNQ9NPC7 610 aa12.89□□□□□ -0.35
RAB3D-201ENST00000222120 RPRD1BQ9NQG5 326 aaKnown RBP12.89□□□□□ -0.35
RAB3D-201ENST00000222120 WWP2O00308 870 aa12.89□□□□□ -0.35
RAB3D-201ENST00000222120 PPP5CP53041 499 aa12.89□□□□□ -0.35
RAB3D-201ENST00000222120 SCN1BQ07699 218 aa12.89□□□□□ -0.35
RAB3D-201ENST00000222120 EIF4HQ15056 248 aaKnown RBP12.89□□□□□ -0.35
RAB3D-201ENST00000222120 ZNF438Q7Z4V0 828 aa12.89□□□□□ -0.35
RAB3D-201ENST00000222120 MARCH9Q86YJ5 346 aa12.89□□□□□ -0.35
RAB3D-201ENST00000222120 DENND6BQ8NEG7 585 aa12.89□□□□□ -0.35
RAB3D-201ENST00000222120 OR51G2Q8NGK0 314 aa12.89□□□□□ -0.35
RAB3D-201ENST00000222120 OR8J1Q8NGP2 316 aa12.89□□□□□ -0.35
RAB3D-201ENST00000222120 CAMK1GQ96NX5 476 aa12.89□□□□□ -0.35
RAB3D-201ENST00000222120 CENPOQ9BU64 300 aa12.89□□□□□ -0.35
RAB3D-201ENST00000222120 BEX2Q9BXY8 128 aa12.89□□□□□ -0.35
RAB3D-201ENST00000222120 MAFFQ9ULX9 164 aa12.89□□□□□ -0.35
RAB3D-201ENST00000222120 PCDHGA2Q9Y5H1 932 aa12.89□□□□□ -0.35
RAB3D-201ENST00000222120 PRSS23O95084 383 aa12.88□□□□□ -0.35
RAB3D-201ENST00000222120 CDK1P06493 297 aa12.88□□□□□ -0.35
RAB3D-201ENST00000222120 MC3RP41968 323 aa12.88□□□□□ -0.35
RAB3D-201ENST00000222120 COX10Q12887 443 aa12.88□□□□□ -0.35
RAB3D-201ENST00000222120 KLHL22Q53GT1 634 aa12.88□□□□□ -0.35
RAB3D-201ENST00000222120 CCBE1Q6UXH8 406 aaPredicted RBP12.88□□□□□ -0.35
RAB3D-201ENST00000222120 DNAJC22Q8N4W6 341 aa12.88□□□□□ -0.35
RAB3D-201ENST00000222120 TRIM63Q969Q1 353 aa12.88□□□□□ -0.35
RAB3D-201ENST00000222120 DNAJA3Q96EY1 480 aa12.88□□□□□ -0.35
RAB3D-201ENST00000222120 TREX2Q9BQ50 279 aaPredicted RBP12.88□□□□□ -0.35
RAB3D-201ENST00000222120 NKIRAS2Q9NYR9 191 aa12.88□□□□□ -0.35
RAB3D-201ENST00000222120 SLC23A2Q9UGH3 650 aa12.88□□□□□ -0.35
RAB3D-201ENST00000222120 ADAM30Q9UKF2 790 aa12.88□□□□□ -0.35
RAB3D-201ENST00000222120 PCDHGA6Q9Y5G7 932 aa12.88□□□□□ -0.35
RAB3D-201ENST00000222120 FAM86C2PA6NEL3 165 aa12.88□□□□□ -0.35
RAB3D-201ENST00000222120 B3GALT2O43825 422 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms