RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 LRRC3BQ96PB8 259 aa16.36■□□□□ 0.21
USB1-201ENST00000219281 SLX1AQ9BQ83 275 aa16.36■□□□□ 0.21
USB1-201ENST00000219281 ZCCHC2Q9C0B9 1178 aaKnown RBP16.36■□□□□ 0.21
USB1-201ENST00000219281 SIRT3Q9NTG7 399 aaPredicted RBP16.36■□□□□ 0.21
USB1-201ENST00000219281 SEC14L3Q9UDX4 400 aa16.36■□□□□ 0.21
USB1-201ENST00000219281 ASF1AQ9Y294 204 aa16.36■□□□□ 0.21
USB1-201ENST00000219281 PRKAB1Q9Y478 270 aa16.36■□□□□ 0.21
USB1-201ENST00000219281 NME6O75414 186 aaPredicted RBP16.35■□□□□ 0.21
USB1-201ENST00000219281 PDE9AO76083 593 aa16.35■□□□□ 0.21
USB1-201ENST00000219281 CLEC2LP0C7M8 214 aa16.35■□□□□ 0.21
USB1-201ENST00000219281 ITGB7P26010 798 aa16.35■□□□□ 0.21
USB1-201ENST00000219281 DAB2P98082 770 aa16.35■□□□□ 0.21
USB1-201ENST00000219281 KHDRBS2Q5VWX1 349 aaKnown RBP16.35■□□□□ 0.21
USB1-201ENST00000219281 LCTLQ6UWM7 567 aa16.35■□□□□ 0.21
USB1-201ENST00000219281 FAM131AQ6UXB0 335 aa16.35■□□□□ 0.21
USB1-201ENST00000219281 FAM83HQ6ZRV2 1179 aaPredicted RBP16.35■□□□□ 0.21
USB1-201ENST00000219281 COMTD1Q86VU5 262 aa16.35■□□□□ 0.21
USB1-201ENST00000219281 DMRTB1Q96MA1 342 aa16.35■□□□□ 0.21
USB1-201ENST00000219281 ZNF607Q96SK3 696 aa16.35■□□□□ 0.21
USB1-201ENST00000219281 ABCB9Q9NP78 766 aa16.35■□□□□ 0.21
USB1-201ENST00000219281 TXNL4BQ9NX01 149 aaKnown RBP16.35■□□□□ 0.21
USB1-201ENST00000219281 HCN2Q9UL51 889 aa16.35■□□□□ 0.21
USB1-201ENST00000219281 CCDC88CQ9P219 2028 aa16.35■□□□□ 0.21
USB1-201ENST00000219281 IQCMA0A1B0GVH7 501 aa16.35■□□□□ 0.21
USB1-201ENST00000219281 SLC35F4A4IF30 521 aa16.35■□□□□ 0.21
USB1-201ENST00000219281 TFECO14948 347 aaPredicted RBP16.35■□□□□ 0.21
USB1-201ENST00000219281 SPINT1O43278 529 aa16.35■□□□□ 0.21
USB1-201ENST00000219281 BSGP35613 385 aa16.35■□□□□ 0.21
USB1-201ENST00000219281 SYPL1Q16563 259 aa16.35■□□□□ 0.21
USB1-201ENST00000219281 UAP1L1Q3KQV9 507 aa16.35■□□□□ 0.21
USB1-201ENST00000219281 PODNL1Q6PEZ8 512 aa16.35■□□□□ 0.21
USB1-201ENST00000219281 SZRD1Q7Z422 152 aa16.35■□□□□ 0.21
USB1-201ENST00000219281 GRASPQ7Z6J2 395 aaPredicted RBP16.35■□□□□ 0.21
USB1-201ENST00000219281 ZNF513Q8N8E2 541 aaPredicted RBP16.35■□□□□ 0.21
USB1-201ENST00000219281 ZNF557Q8N988 423 aaPredicted RBP16.35■□□□□ 0.21
USB1-201ENST00000219281 ANKRD53Q8N9V6 530 aa16.35■□□□□ 0.21
USB1-201ENST00000219281 OR52I1Q8NGK6 324 aa16.35■□□□□ 0.21
USB1-201ENST00000219281 SMPDL3AQ92484 453 aa16.35■□□□□ 0.21
USB1-201ENST00000219281 UCN3Q969E3 161 aa16.35■□□□□ 0.21
USB1-201ENST00000219281 SLC25A46Q96AG3 418 aa16.35■□□□□ 0.21
USB1-201ENST00000219281 ST6GAL2Q96JF0 529 aa16.35■□□□□ 0.21
USB1-201ENST00000219281 FUZQ9BT04 418 aa16.35■□□□□ 0.21
USB1-201ENST00000219281 MMP28Q9H239 520 aa16.35■□□□□ 0.21
USB1-201ENST00000219281 SERHL2Q9H4I8 314 aa16.35■□□□□ 0.21
USB1-201ENST00000219281 A4GNTQ9UNA3 340 aa16.35■□□□□ 0.21
USB1-201ENST00000219281 FEZF1A0PJY2 475 aa16.34■□□□□ 0.21
USB1-201ENST00000219281 M0R3H8 397 aa16.34■□□□□ 0.21
USB1-201ENST00000219281 OR12D1P0DN82 309 aa16.34■□□□□ 0.21
USB1-201ENST00000219281 ETV5P41161 510 aa16.34■□□□□ 0.21
USB1-201ENST00000219281 ETV1P50549 477 aa16.34■□□□□ 0.21
USB1-201ENST00000219281 HNRNPA0Q13151 305 aaKnown RBP16.34■□□□□ 0.21
USB1-201ENST00000219281 ARHGAP15Q53QZ3 475 aa16.34■□□□□ 0.21
USB1-201ENST00000219281 C22orf42Q6IC83 251 aa16.34■□□□□ 0.21
USB1-201ENST00000219281 OLIG3Q7RTU3 272 aa16.34■□□□□ 0.21
USB1-201ENST00000219281 NUS1Q96E22 293 aa16.34■□□□□ 0.21
USB1-201ENST00000219281 LRIG1Q96JA1 1093 aa16.34■□□□□ 0.21
USB1-201ENST00000219281 NELL2Q99435 816 aa16.34■□□□□ 0.21
USB1-201ENST00000219281 NEUROD4Q9HD90 331 aa16.34■□□□□ 0.21
USB1-201ENST00000219281 TAC3Q9UHF0 121 aa16.34■□□□□ 0.21
USB1-201ENST00000219281 ACAD8Q9UKU7 415 aa16.34■□□□□ 0.21
USB1-201ENST00000219281 KLHL20Q9Y2M5 609 aa16.34■□□□□ 0.21
USB1-201ENST00000219281 PRAMEF27A3QJZ7 478 aa16.34■□□□□ 0.21
USB1-201ENST00000219281 PAPLNO95428 1278 aa16.34■□□□□ 0.21
USB1-201ENST00000219281 FGF19O95750 216 aa16.34■□□□□ 0.21
USB1-201ENST00000219281 ZNF24P17028 368 aa16.34■□□□□ 0.21
USB1-201ENST00000219281 PCBP4P57723 403 aaKnown RBP16.34■□□□□ 0.21
USB1-201ENST00000219281 SMIM11AP58511 58 aa16.34■□□□□ 0.21
USB1-201ENST00000219281 LSM11P83369 360 aaKnown RBP eCLIP16.34■□□□□ 0.211e-9■■■■■ 34.8
USB1-201ENST00000219281 GINS1Q14691 196 aa16.34■□□□□ 0.21
USB1-201ENST00000219281 ZFP69Q49AA0 526 aa16.34■□□□□ 0.21
USB1-201ENST00000219281 FLYWCH1Q4VC44 716 aa16.34■□□□□ 0.21
USB1-201ENST00000219281 ATAT1Q5SQI0 421 aa16.34■□□□□ 0.21
USB1-201ENST00000219281 RNLSQ5VYX0 342 aa16.34■□□□□ 0.21
USB1-201ENST00000219281 HMGN2P46Q86SG4 172 aa16.34■□□□□ 0.21
USB1-201ENST00000219281 FAM26EQ8N5C1 309 aa16.34■□□□□ 0.21
USB1-201ENST00000219281 OR5D16Q8NGK9 328 aa16.34■□□□□ 0.21
USB1-201ENST00000219281 HCAR2Q8TDS4 363 aa16.34■□□□□ 0.21
USB1-201ENST00000219281 ING5Q8WYH8 240 aa16.34■□□□□ 0.21
USB1-201ENST00000219281 PPP1R16AQ96I34 528 aa16.34■□□□□ 0.21
USB1-201ENST00000219281 LRR1Q96L50 414 aa16.34■□□□□ 0.21
USB1-201ENST00000219281 PHOX2BQ99453 314 aa16.34■□□□□ 0.21
USB1-201ENST00000219281 TREX2Q9BQ50 279 aaPredicted RBP16.34■□□□□ 0.21
USB1-201ENST00000219281 CUEDC1Q9NWM3 386 aaPredicted RBP16.34■□□□□ 0.21
USB1-201ENST00000219281 DIMT1Q9UNQ2 313 aaKnown RBP16.34■□□□□ 0.21
USB1-201ENST00000219281 CARD8Q9Y2G2 431 aa16.34■□□□□ 0.21
USB1-201ENST00000219281 PCYT1BQ9Y5K3 369 aaPredicted RBP16.34■□□□□ 0.21
USB1-201ENST00000219281 NOX1Q9Y5S8 564 aa16.34■□□□□ 0.21
USB1-201ENST00000219281 PLXND1Q9Y4D7 1925 aa16.33■□□□□ 0.21
USB1-201ENST00000219281 MEIOCA2RUB1 952 aa16.33■□□□□ 0.2
USB1-201ENST00000219281 LINC01553A4QN01 128 aa16.33■□□□□ 0.2
USB1-201ENST00000219281 RAB36O95755 333 aa16.33■□□□□ 0.2
USB1-201ENST00000219281 MMP11P24347 488 aa16.33■□□□□ 0.2
USB1-201ENST00000219281 CCT3P49368 545 aaKnown RBP16.33■□□□□ 0.2
USB1-201ENST00000219281 SYT14P1Q58G82 188 aa16.33■□□□□ 0.2
USB1-201ENST00000219281 ACSM5Q6NUN0 579 aa16.33■□□□□ 0.2
USB1-201ENST00000219281 XAGE5Q8WWM1 108 aa16.33■□□□□ 0.2
USB1-201ENST00000219281 RAD51AP1Q96B01 352 aa16.33■□□□□ 0.2
USB1-201ENST00000219281 ZNF582Q96NG8 517 aaPredicted RBP16.33■□□□□ 0.2
USB1-201ENST00000219281 MS4A8Q9BY19 250 aa16.33■□□□□ 0.2
USB1-201ENST00000219281 POLDIP3Q9BY77 421 aaKnown RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms