RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 NPRL3Q12980 569 aa13.09□□□□□ -0.31
SIX4-201ENST00000216513 RIPK1Q13546 671 aa13.09□□□□□ -0.31
SIX4-201ENST00000216513 OR5M10Q6IEU7 315 aa13.09□□□□□ -0.31
SIX4-201ENST00000216513 RFKQ969G6 155 aa13.09□□□□□ -0.31
SIX4-201ENST00000216513 MBNL1Q9NR56 388 aaKnown RBP13.09□□□□□ -0.31
SIX4-201ENST00000216513 TAS2R1Q9NYW7 299 aa13.09□□□□□ -0.31
SIX4-201ENST00000216513 CRNNQ9UBG3 495 aaPredicted RBP13.09□□□□□ -0.31
SIX4-201ENST00000216513 SOX30O94993 753 aa13.08□□□□□ -0.32
SIX4-201ENST00000216513 RPS26P62854 115 aaKnown RBP13.08□□□□□ -0.32
SIX4-201ENST00000216513 LRIT3Q3SXY7 679 aa13.08□□□□□ -0.32
SIX4-201ENST00000216513 LIN54Q6MZP7 749 aa13.08□□□□□ -0.32
SIX4-201ENST00000216513 DNAAF1Q8NEP3 725 aa13.08□□□□□ -0.32
SIX4-201ENST00000216513 C10orf82Q8WW14 230 aa13.08□□□□□ -0.32
SIX4-201ENST00000216513 SGCDQ92629 289 aa13.08□□□□□ -0.32
SIX4-201ENST00000216513 POP5Q969H6 163 aaKnown RBP13.08□□□□□ -0.32
SIX4-201ENST00000216513 DDIT4LQ96D03 193 aa13.08□□□□□ -0.32
SIX4-201ENST00000216513 DIRAS2Q96HU8 199 aa13.08□□□□□ -0.32
SIX4-201ENST00000216513 OR6C2Q9NZP2 312 aa13.08□□□□□ -0.32
SIX4-201ENST00000216513 IL17CQ9P0M4 197 aa13.08□□□□□ -0.32
SIX4-201ENST00000216513 PCDHB10Q9UN67 800 aa13.08□□□□□ -0.32
SIX4-201ENST00000216513 A0A1W2PPK0 400 aa13.08□□□□□ -0.32
SIX4-201ENST00000216513 UBE2QL1A1L167 161 aa13.08□□□□□ -0.32
SIX4-201ENST00000216513 M0QX08 132 aa13.08□□□□□ -0.32
SIX4-201ENST00000216513 UQCRC2P22695 453 aa13.08□□□□□ -0.32
SIX4-201ENST00000216513 STAT5AP42229 794 aa13.08□□□□□ -0.32
SIX4-201ENST00000216513 MYBPHQ13203 477 aa13.08□□□□□ -0.32
SIX4-201ENST00000216513 SPANXN4Q5MJ08 99 aa13.08□□□□□ -0.32
SIX4-201ENST00000216513 ZNF678Q5SXM1 525 aa13.08□□□□□ -0.32
SIX4-201ENST00000216513 SLC35F1Q5T1Q4 408 aa13.08□□□□□ -0.32
SIX4-201ENST00000216513 SYT13Q7L8C5 426 aa13.08□□□□□ -0.32
SIX4-201ENST00000216513 DGLUCYQ7Z3D6 616 aa13.08□□□□□ -0.32
SIX4-201ENST00000216513 OR51Q1Q8NH59 317 aa13.08□□□□□ -0.32
SIX4-201ENST00000216513 POLR2J3Q9H1A7 115 aaKnown RBP13.08□□□□□ -0.32
SIX4-201ENST00000216513 CDH20Q9HBT6 801 aa13.08□□□□□ -0.32
SIX4-201ENST00000216513 DYNLRB1Q9NP97 96 aa13.08□□□□□ -0.32
SIX4-201ENST00000216513 BRWD3Q6RI45 1802 aa13.08□□□□□ -0.32
SIX4-201ENST00000216513 RFLNAQ6ZTI6 216 aa13.08□□□□□ -0.32
SIX4-201ENST00000216513 MCHR1Q99705 422 aa13.08□□□□□ -0.32
SIX4-201ENST00000216513 PELI2Q9HAT8 420 aa13.08□□□□□ -0.32
SIX4-201ENST00000216513 TPT1P8Q9HAU6 139 aa13.08□□□□□ -0.32
SIX4-201ENST00000216513 CLEC4EQ9ULY5 219 aa13.08□□□□□ -0.32
SIX4-201ENST00000216513 SCN9AQ15858 1988 aa13.08□□□□□ -0.32
SIX4-201ENST00000216513 MKRN2OSH3BPM6 223 aa13.08□□□□□ -0.32
SIX4-201ENST00000216513 PGRMC2O15173 223 aa13.08□□□□□ -0.32
SIX4-201ENST00000216513 SCGNO76038 276 aa13.08□□□□□ -0.32
SIX4-201ENST00000216513 SORBS2O94875 1100 aaKnown RBP13.08□□□□□ -0.32
SIX4-201ENST00000216513 ENDOUP21128 410 aaKnown RBP13.08□□□□□ -0.32
SIX4-201ENST00000216513 DCTN2Q13561 401 aaKnown RBP13.08□□□□□ -0.32
SIX4-201ENST00000216513 NDUFAF5Q5TEU4 345 aa13.08□□□□□ -0.32
SIX4-201ENST00000216513 UNQ6126/PRO20091Q6UXV3 157 aa13.08□□□□□ -0.32
SIX4-201ENST00000216513 SCML4Q8N228 414 aa13.08□□□□□ -0.32
SIX4-201ENST00000216513 C7orf26Q96N11 449 aa13.08□□□□□ -0.32
SIX4-201ENST00000216513 ZNF451Q9Y4E5 1061 aa13.08□□□□□ -0.32
SIX4-201ENST00000216513 MRPL3P09001 348 aaKnown RBP13.08□□□□□ -0.32
SIX4-201ENST00000216513 KCNAB1Q14722 419 aa13.08□□□□□ -0.32
SIX4-201ENST00000216513 MANEALQ5VSG8 457 aa13.08□□□□□ -0.32
SIX4-201ENST00000216513 CANT1Q8WVQ1 401 aa13.08□□□□□ -0.32
SIX4-201ENST00000216513 OR5P2Q8WZ92 322 aa13.08□□□□□ -0.32
SIX4-201ENST00000216513 PEX13Q92968 403 aa13.08□□□□□ -0.32
SIX4-201ENST00000216513 ZC3HAV1LQ96H79 300 aaKnown RBP13.08□□□□□ -0.32
SIX4-201ENST00000216513 FBXL20Q96IG2 436 aa13.08□□□□□ -0.32
SIX4-201ENST00000216513 MRPS2Q9Y399 296 aaKnown RBP13.08□□□□□ -0.32
SIX4-201ENST00000216513 TNFRSF10AO00220 468 aa13.07□□□□□ -0.32
SIX4-201ENST00000216513 FLRT2O43155 660 aa13.07□□□□□ -0.32
SIX4-201ENST00000216513 CD2P06729 351 aa13.07□□□□□ -0.32
SIX4-201ENST00000216513 CSNK1DP48730 415 aa13.07□□□□□ -0.32
SIX4-201ENST00000216513 ST3GAL3Q11203 375 aa13.07□□□□□ -0.32
SIX4-201ENST00000216513 PRAMEF20Q5VT98 475 aa13.07□□□□□ -0.32
SIX4-201ENST00000216513 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.07□□□□□ -0.32
SIX4-201ENST00000216513 ZNF676Q8N7Q3 588 aa13.07□□□□□ -0.32
SIX4-201ENST00000216513 BEX2Q9BXY8 128 aa13.07□□□□□ -0.32
SIX4-201ENST00000216513 LRRN3Q9H3W5 708 aa13.07□□□□□ -0.32
SIX4-201ENST00000216513 BEX1Q9HBH7 125 aa13.07□□□□□ -0.32
SIX4-201ENST00000216513 HHATLQ9HCP6 504 aa13.07□□□□□ -0.32
SIX4-201ENST00000216513 CASP8AP2Q9UKL3 1982 aa13.07□□□□□ -0.32
SIX4-201ENST00000216513 TRGV8A0A0C4DH27 118 aa13.07□□□□□ -0.32
SIX4-201ENST00000216513 NUAK1O60285 661 aa13.07□□□□□ -0.32
SIX4-201ENST00000216513 CD68P34810 354 aaPredicted RBP13.07□□□□□ -0.32
SIX4-201ENST00000216513 CBX5P45973 191 aa13.07□□□□□ -0.32
SIX4-201ENST00000216513 TRIP6Q15654 476 aaKnown RBP13.07□□□□□ -0.32
SIX4-201ENST00000216513 ASB18Q6ZVZ8 466 aa13.07□□□□□ -0.32
SIX4-201ENST00000216513 PGAM4Q8N0Y7 254 aa13.07□□□□□ -0.32
SIX4-201ENST00000216513 YIPF7Q8N8F6 280 aa13.07□□□□□ -0.32
SIX4-201ENST00000216513 IL17RCQ8NAC3 791 aa13.07□□□□□ -0.32
SIX4-201ENST00000216513 TMEM178AQ8NBL3 297 aa13.07□□□□□ -0.32
SIX4-201ENST00000216513 OR8K3Q8NH51 312 aa13.07□□□□□ -0.32
SIX4-201ENST00000216513 NSMAFQ92636 917 aa13.07□□□□□ -0.32
SIX4-201ENST00000216513 SIGLEC10Q96LC7 697 aa13.07□□□□□ -0.32
SIX4-201ENST00000216513 WASH6PQ9NQA3 447 aa13.07□□□□□ -0.32
SIX4-201ENST00000216513 FSCN3Q9NQT6 498 aa13.07□□□□□ -0.32
SIX4-201ENST00000216513 EDARQ9UNE0 448 aa13.07□□□□□ -0.32
SIX4-201ENST00000216513 PCDHB14Q9Y5E9 798 aa13.07□□□□□ -0.32
SIX4-201ENST00000216513 TRIM64A6NGJ6 449 aa13.07□□□□□ -0.32
SIX4-201ENST00000216513 ZNF749O43361 778 aa13.07□□□□□ -0.32
SIX4-201ENST00000216513 RAB39AQ14964 217 aa13.07□□□□□ -0.32
SIX4-201ENST00000216513 VHLLQ6RSH7 139 aa13.07□□□□□ -0.32
SIX4-201ENST00000216513 OR2I1PQ8NGU4 316 aa13.07□□□□□ -0.32
SIX4-201ENST00000216513 TLCD1Q96CP7 247 aa13.07□□□□□ -0.32
SIX4-201ENST00000216513 C14orf105Q9NVL8 296 aa13.07□□□□□ -0.32
SIX4-201ENST00000216513 FAM120CQ9NX05 1096 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms