RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 HMGN2P05204 90 aaKnown RBP7.8□□□□□ -1.16
VAMP3-201ENST00000054666 ALPPL2P10696 532 aa7.8□□□□□ -1.16
VAMP3-201ENST00000054666 ELAVL4P26378 380 aaKnown RBP7.8□□□□□ -1.16
VAMP3-201ENST00000054666 FEN1P39748 380 aaKnown RBP7.8□□□□□ -1.16
VAMP3-201ENST00000054666 SERPINB10P48595 397 aa7.8□□□□□ -1.16
VAMP3-201ENST00000054666 TPMTP51580 245 aa7.8□□□□□ -1.16
VAMP3-201ENST00000054666 LIM2P55344 173 aa7.8□□□□□ -1.16
VAMP3-201ENST00000054666 SRP54P61011 504 aaKnown RBP7.8□□□□□ -1.16
VAMP3-201ENST00000054666 BTN3A2P78410 334 aa7.8□□□□□ -1.16
VAMP3-201ENST00000054666 OCA2Q04671 838 aa7.8□□□□□ -1.16
VAMP3-201ENST00000054666 TBCEQ15813 527 aaPredicted RBP7.8□□□□□ -1.16
VAMP3-201ENST00000054666 GPAT3Q53EU6 434 aa7.8□□□□□ -1.16
VAMP3-201ENST00000054666 ATAD3BQ5T9A4 648 aa7.8□□□□□ -1.16
VAMP3-201ENST00000054666 MLIPQ5VWP3 458 aa7.8□□□□□ -1.16
VAMP3-201ENST00000054666 C18orf63Q68DL7 685 aa7.8□□□□□ -1.16
VAMP3-201ENST00000054666 SAMD14Q8IZD0 417 aaPredicted RBP7.8□□□□□ -1.16
VAMP3-201ENST00000054666 STX19Q8N4C7 294 aa7.8□□□□□ -1.16
VAMP3-201ENST00000054666 DNAJC22Q8N4W6 341 aa7.8□□□□□ -1.16
VAMP3-201ENST00000054666 SMRP1Q8NCR6 262 aa7.8□□□□□ -1.16
VAMP3-201ENST00000054666 OR10G6Q8NH81 332 aa7.8□□□□□ -1.16
VAMP3-201ENST00000054666 RHOXF1Q8NHV9 184 aa7.8□□□□□ -1.16
VAMP3-201ENST00000054666 NT5CQ8TCD5 201 aa7.8□□□□□ -1.16
VAMP3-201ENST00000054666 MIPOL1Q8TD10 442 aa7.8□□□□□ -1.16
VAMP3-201ENST00000054666 UCN3Q969E3 161 aa7.8□□□□□ -1.16
VAMP3-201ENST00000054666 UBE2FQ969M7 185 aa7.8□□□□□ -1.16
VAMP3-201ENST00000054666 CNRIP1Q96F85 164 aaPredicted RBP7.8□□□□□ -1.16
VAMP3-201ENST00000054666 RHNO1Q9BSD3 238 aa7.8□□□□□ -1.16
VAMP3-201ENST00000054666 ITPAQ9BY32 194 aa7.8□□□□□ -1.16
VAMP3-201ENST00000054666 TMEM168Q9H0V1 697 aa7.8□□□□□ -1.16
VAMP3-201ENST00000054666 OCEL1Q9H607 264 aa7.8□□□□□ -1.16
VAMP3-201ENST00000054666 CACYBPQ9HB71 228 aaKnown RBP7.8□□□□□ -1.16
VAMP3-201ENST00000054666 CD93Q9NPY3 652 aa7.8□□□□□ -1.16
VAMP3-201ENST00000054666 NECTIN3Q9NQS3 549 aa7.8□□□□□ -1.16
VAMP3-201ENST00000054666 TRNAU1APQ9NX07 287 aaKnown RBP7.8□□□□□ -1.16
VAMP3-201ENST00000054666 CALML5Q9NZT1 146 aa7.8□□□□□ -1.16
VAMP3-201ENST00000054666 ZNF624Q9P2J8 865 aaPredicted RBP7.8□□□□□ -1.16
VAMP3-201ENST00000054666 APOBEC3BQ9UH17 382 aaKnown RBP7.8□□□□□ -1.16
VAMP3-201ENST00000054666 PSORS1C1Q9UIG5 152 aa7.8□□□□□ -1.16
VAMP3-201ENST00000054666 KLF15Q9UIH9 416 aa7.8□□□□□ -1.16
VAMP3-201ENST00000054666 PHF11Q9UIL8 331 aa7.8□□□□□ -1.16
VAMP3-201ENST00000054666 TRBV23OR9-2A0A075B6M9 112 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 CLCA1A8K7I4 914 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 M0R3G1 203 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 AXIN1O15169 862 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 PGRMC2O15173 223 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 CASC3O15234 703 aaKnown RBP7.79□□□□□ -1.16
VAMP3-201ENST00000054666 ZBTB11O95625 1053 aaPredicted RBP7.79□□□□□ -1.16
VAMP3-201ENST00000054666 SEMA4FO95754 770 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 EML2O95834 649 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 ZNF888P0CJ79 500 aaPredicted RBP7.79□□□□□ -1.16
VAMP3-201ENST00000054666 C8orf89P0DMQ9 161 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 CD72P21854 359 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 NR4A1P22736 598 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 POU1F1P28069 291 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 SLC19A1P41440 591 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 RANBP2P49792 3224 aaKnown RBP7.79□□□□□ -1.16
VAMP3-201ENST00000054666 CRISP1P54107 249 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 TNFRSF17Q02223 184 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 SPCS2Q15005 226 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 PTGES3Q15185 160 aaKnown RBP7.79□□□□□ -1.16
VAMP3-201ENST00000054666 GPR19Q15760 415 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 MOGQ16653 247 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 C11orf91Q3C1V1 193 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 ZNF829Q3KNS6 432 aaPredicted RBP7.79□□□□□ -1.16
VAMP3-201ENST00000054666 PRAMEF8Q5VWM4 474 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 PRAMEF7Q5VXH5 474 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 TCTN3Q6NUS6 607 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 KLHL17Q6TDP4 642 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 CCDC103Q8IW40 242 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 CAMKVQ8NCB2 501 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 ZCCHC10Q8TBK6 192 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 BMFQ96LC9 184 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 DHRS1Q96LJ7 313 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 YIPF4Q9BSR8 244 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 FNDC11Q9BVV2 318 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 UCK2Q9BZX2 261 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 KCNK12Q9HB15 430 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 BCL2L10Q9HD36 194 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 EQTNQ9NQ60 294 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 CLN6Q9NWW5 311 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 ANKMY1Q9P2S6 941 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 CD207Q9UJ71 328 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 MMP17Q9ULZ9 603 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 COL4A2P08572 1712 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 NINQ8N4C6 2090 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 A0A0G2JPF8 293 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 OR2A25A4D2G3 310 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 SH3D21A4FU49 640 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 ZAR1LA6NP61 321 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 HNRNPCL2B2RXH8 293 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 HNRNPCL3B7ZW38 293 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 H3BN98 237 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 M0R3H8 397 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 TOR1BO14657 336 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 FFAR1O14842 300 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 PROM1O43490 865 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 ASNA1O43681 348 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 B3GALT2O43825 422 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 NME6O75414 186 aaPredicted RBP7.79□□□□□ -1.16
VAMP3-201ENST00000054666 GASTP01350 101 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms