RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 OR4K1Q8NGD4 311 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 OR5D14Q8NGL3 314 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 KCNE4Q8WWG9 221 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 MFSD3Q96ES6 412 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 VRTNQ9H8Y1 702 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 IL26Q9NPH9 171 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 QPCTLQ9NXS2 382 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 CNOT2Q9NZN8 540 aaKnown RBP5.83□□□□□ -1.48
VPS13D-201ENST00000011700 GMEB2Q9UKD1 530 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 SLC35A3Q9Y2D2 325 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 SLC6A5Q9Y345 797 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 TNRC6CQ9HCJ0 1690 aaKnown RBP5.83□□□□□ -1.48
VPS13D-201ENST00000011700 FOXK1P85037 733 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 CREB5Q02930 508 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 OTUD1Q5VV17 481 aaPredicted RBP5.83□□□□□ -1.48
VPS13D-201ENST00000011700 OR9A2Q8NGT5 310 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 ZNF675Q8TD23 568 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 CD244Q9BZW8 370 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 KLRF1Q9NZS2 232 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 ETV7Q9Y603 341 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 FANCGO15287 622 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 BRCC3P46736 316 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 HLCSP50747 726 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 RPL23AP62750 156 aaKnown RBP5.83□□□□□ -1.48
VPS13D-201ENST00000011700 TLE4Q04727 773 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 RAB35Q15286 201 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 OR52J3Q8NH60 311 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 ALG3Q92685 438 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 TBC1D20Q96BZ9 403 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 OR11A1Q9GZK7 315 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 LAMP3Q9UQV4 416 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 BTRCQ9Y297 605 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 A0A1W2PPH5 198 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 ZNF705EA8MWA4 302 aaPredicted RBP5.83□□□□□ -1.48
VPS13D-201ENST00000011700 C17orf112F2Z3M2 114 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 USP12O75317 370 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 GSRP00390 522 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 GOT2P00505 430 aaKnown RBP5.83□□□□□ -1.48
VPS13D-201ENST00000011700 AMY2BP19961 511 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 AHCYP23526 432 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 PRKCHP24723 683 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 SERPINF1P36955 418 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 BDKRB1P46663 353 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 KHDC1Q4VXA5 237 aaKnown RBP5.83□□□□□ -1.48
VPS13D-201ENST00000011700 CYBRD1Q53TN4 286 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 NDUFAF5Q5TEU4 345 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 HGSNATQ68CP4 663 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 ZNF776Q68DI1 518 aaPredicted RBP5.83□□□□□ -1.48
VPS13D-201ENST00000011700 SERPINA11Q86U17 422 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 GTPBP8Q8N3Z3 284 aaPredicted RBP5.83□□□□□ -1.48
VPS13D-201ENST00000011700 CPXM2Q8N436 756 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 TCEANCQ8N8B7 351 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 SIPA1Q96FS4 1042 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 TMEM41AQ96HV5 264 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 FEM1AQ9BSK4 669 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 OR51V1Q9H2C8 321 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 KCNJ16Q9NPI9 418 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 ENAMQ9NRM1 1142 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 NAALAD2Q9Y3Q0 740 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 WDR45Q9Y484 360 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 A6NLC8 198 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 MBP02144 154 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 CHRNA1P02708 482 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 SP3Q02447 781 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 VEZF1Q14119 521 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 SF3A2Q15428 464 aaKnown RBP5.83□□□□□ -1.48
VPS13D-201ENST00000011700 LRRC56Q8IYG6 542 aaPredicted RBP5.83□□□□□ -1.48
VPS13D-201ENST00000011700 TCTE3Q8IZS6 198 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 OR9A1PQ8NGU1 263 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 OR5P2Q8WZ92 322 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 TXNDC15Q96J42 360 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 SACM1LQ9NTJ5 587 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 A0A0G2JN53 185 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 OR2T1O43869 369 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 KLRC4O43908 158 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 GLSO94925 669 aaPredicted RBP5.83□□□□□ -1.48
VPS13D-201ENST00000011700 JUPP14923 745 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 GK2Q14410 553 aaPredicted RBP5.83□□□□□ -1.48
VPS13D-201ENST00000011700 CNN3Q15417 329 aaKnown RBP5.83□□□□□ -1.48
VPS13D-201ENST00000011700 RNF220Q5VTB9 566 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 GDPD4Q6W3E5 623 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 HIST2H3AQ71DI3 136 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 PARGQ86W56 976 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 NKD1Q969G9 470 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 DHRS1Q96LJ7 313 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 C12orf10Q9HB07 376 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 PDE7BQ9NP56 450 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 GMPR2Q9P2T1 348 aaKnown RBP5.83□□□□□ -1.48
VPS13D-201ENST00000011700 TMEM98Q9Y2Y6 226 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 PRAMEF2O60811 474 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 ENDOD1O94919 500 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 S100A8P05109 93 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 ITGB1P05556 798 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 HSD17B1P14061 328 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 MAGEA11P43364 429 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 DLX5P56178 289 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 RAB4BP61018 213 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 CD83Q01151 205 aa5.83□□□□□ -1.48
VPS13D-201ENST00000011700 SSBP1Q04837 148 aaKnown RBP5.83□□□□□ -1.48
VPS13D-201ENST00000011700 INCA1Q0VD86 236 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms