RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Btaf1E9QAE3 1848 aa9.85□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Olfr1375A0A0N4SUP0 313 aa9.85□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Gm2022A0A1Y7VLT7 144 aa9.85□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Gm8973D3YX71 104 aa9.85□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Gm6401L7N2C0 213 aa9.85□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 NfkbieO54910 364 aa9.85□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 DdcO88533 480 aa9.85□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 LipcP27656 510 aa9.85□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Arf5P84084 180 aaKnown RBP9.85□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Ebf1Q07802 591 aa9.85□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Pin1rt1Q3ULQ2 159 aa9.85□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Lingo2Q3URE9 606 aa9.85□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Ephx3Q3V1F8 367 aa9.85□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 PtprcapQ64697 197 aa9.85□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Lamp3Q7TST5 411 aa9.85□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Mgat4bQ812F8 548 aa9.85□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Micu2Q8CD10 432 aa9.85□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Slc22a12Q8CFZ5 553 aa9.85□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Angptl8Q8R1L8 198 aa9.85□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Nt5c1bQ91YE9 573 aa9.85□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Riok2Q9CQS5 547 aa9.85□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Jph3Q9ET77 744 aa9.85□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Mapk11Q9WUI1 364 aa9.85□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Mast2Q60592 1734 aa9.85□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Lrr1D3YY91 422 aa9.85□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Catsperg1E9Q355 1151 aa9.85□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Olfr640E9Q7P5 314 aa9.85□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Gm5724L7N264 670 aa9.85□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Mtnd1P03888 318 aa9.85□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Klk1b8P07628 261 aa9.85□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 TrhrP21761 393 aa9.85□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Chrm4P32211 479 aa9.85□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 MazP56671 477 aaKnown RBP9.85□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Tm9sf2P58021 662 aa9.85□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Tbx5P70326 518 aa9.85□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 OxtrP97926 388 aa9.85□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Dlk1Q09163 385 aa9.85□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Slc39a12Q5FWH7 689 aa9.85□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Xrcc1Q60596 631 aa9.85□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 HlxQ61670 476 aa9.85□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Mvb12aQ78HU3 271 aa9.85□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Psmf1Q8BHL8 271 aa9.85□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Armcx6Q8K3A6 301 aa9.85□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Nol3Q9D1X0 220 aa9.85□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 4933436I01RikQ9D3T1 429 aa9.85□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Psmg2Q9EST4 264 aa9.85□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Dclk1Q9JLM8 756 aa9.85□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Orc5Q9WUV0 435 aa9.85□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Pcsk6F6XJP7 959 aa9.85□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Rab2bP59279 216 aaKnown RBP9.85□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Msto1Q2YDW2 556 aa9.85□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 C2cd4cC2CD4Q5HZI2 419 aa9.85□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Mblac2Q8BL86 279 aa9.85□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Cdh7Q8BM92 785 aa9.85□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Tgif2Q8C0Y1 237 aa9.85□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Lsm1Q8VC85 133 aa9.85□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Wdr74Q8VCG3 384 aa9.85□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Olfr61Q8VGM2 311 aa9.85□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Oosp1Q925U0 202 aa9.85□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Tmed9Q99KF1 235 aaKnown RBP9.85□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Fam69bQ99ML4 431 aa9.85□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Ankrd7Q9D504 279 aa9.85□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Q9DAY5 185 aa9.85□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Pop7Q9DCH2 140 aa9.85□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Galntl6E5D8G1 601 aa9.85□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 A430033K04RikE9Q8G5 680 aa9.85□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Prl7a1O54830 266 aa9.85□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Lrrn4clQ3TYX2 239 aa9.85□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Pou4f2Q63934 411 aa9.85□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 AktipQ64362 292 aa9.85□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Znf784Q8BI69 297 aa9.85□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Timmdc1Q8BUY5 285 aa9.85□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Mterf1aQ8CHZ9 379 aa9.85□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 TbceQ8CIV8 524 aa9.85□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 MrgprhQ99MT8 321 aa9.85□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Upk3bl1Q9D701 249 aa9.85□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Fank1Q9DAM9 344 aa9.85□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Ltbp2O08999 1813 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Gm15155B1B034 138 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 TmppeD3Z286 447 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Gm6460F6YJZ8 199 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Olfr190K7N5T5 307 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Gstm6O35660 218 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Tra2bP62996 288 aaKnown RBP9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Polr1dP97304 133 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Ankrd37Q569N2 159 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Diras2Q5PR73 199 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Map4k2Q61161 821 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Hs3st2Q673U1 367 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Ppp1r26Q6A025 1163 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Dpp10Q6NXK7 797 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Defb14Q7TNV9 67 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Olfr1197Q7TR13 314 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Olfr1196Q7TR14 314 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 C2cd4bQ80XU5 340 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Treml1Q8K558 317 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Abcg4Q91WA9 646 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Rnf144aQ925F3 292 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Tex13bQ99MW5 186 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Pno1Q9CPS7 248 aaKnown RBP9.84□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 34.5 ms