RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 DptQ9QZZ6 201 aa12.08□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Srebf1Q9WTN3 1134 aa12.08□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Cdc7Q9Z0H0 564 aa12.08□□□□□ -0.48
Rnf4-201ENSMUST00000030992 MndalD0QMC3 538 aaKnown RBP12.07□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Catsperg1E9Q355 1151 aa12.07□□□□□ -0.48
Rnf4-201ENSMUST00000030992 TspearJ3S6Y1 670 aa12.07□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Mapk12O08911 367 aa12.07□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Htr3aP23979 487 aa12.07□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Samd12Q0VE29 161 aa12.07□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Ifit3Q64345 403 aa12.07□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Ffar1Q76JU9 300 aa12.07□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Lats2Q7TSJ6 1042 aa12.07□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Slc6a17Q8BJI1 727 aa12.07□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Pithd1Q8BWR2 211 aa12.07□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Pqlc3Q8C6U2 202 aa12.07□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Dleu7Q8CHZ8 209 aa12.07□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Zbtb20Q8K0L9 741 aa12.07□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Hdac8Q8VH37 377 aa12.07□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Pcyt2Q922E4 404 aa12.07□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Cby3Q9CVN6 235 aa12.07□□□□□ -0.48
Rnf4-201ENSMUST00000030992 CenpvQ9CXS4 252 aa12.07□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Ccdc77Q9CZH8 489 aa12.07□□□□□ -0.48
Rnf4-201ENSMUST00000030992 DlstQ9D2G2 454 aa12.07□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Sec23bQ9D662 767 aa12.07□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Ccdc3Q9D6Y1 273 aa12.07□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Mamdc4A2AJA7 1228 aa12.07□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Ajm1A2AJA9 974 aa12.07□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Olfr1123A2AT85 323 aa12.07□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Ifit3bE9PV48 403 aa12.07□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Gm5724L7N264 670 aa12.07□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Zfp60P16374 707 aa12.07□□□□□ -0.48
Rnf4-201ENSMUST00000030992 FesP16879 822 aa12.07□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Rpl6P47911 296 aaKnown RBP12.07□□□□□ -0.48
Rnf4-201ENSMUST00000030992 ArntP53762 791 aa12.07□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Atxn1P54254 791 aa12.07□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Fgf1P61148 155 aa12.07□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Fgf13P70377 245 aa12.07□□□□□ -0.48
Rnf4-201ENSMUST00000030992 EvlP70429 414 aa12.07□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Bcl2a1Q07440 172 aa12.07□□□□□ -0.48
Rnf4-201ENSMUST00000030992 CrxosQ3UL53 246 aa12.07□□□□□ -0.48
Rnf4-201ENSMUST00000030992 RasefQ5RI75 627 aa12.07□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Olfr871Q7TRF0 311 aa12.07□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Rab39aQ8BHD0 217 aa12.07□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Nt5dc1Q8C5P5 467 aa12.07□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Pdlim5Q8CI51 591 aaKnown RBP12.07□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Slc15a4Q91W98 574 aa12.07□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Olfr459Q924H8 314 aa12.07□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Mospd2Q9CWP6 518 aa12.07□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Sugt1Q9CX34 336 aa12.07□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Trmt5Q9D0C4 501 aa12.07□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Rnf186Q9D241 226 aa12.07□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Nusap1Q9ERH4 427 aaKnown RBP12.07□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Rhox2dW4VSN9 191 aa12.07□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Mybpc1D3YU50 1127 aa12.06□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Kctd17E0CYQ0 296 aa12.06□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Vmn2r18E9Q280 788 aa12.06□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Gm10639E9Q6L7 222 aa12.06□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Galnt9G3X942 604 aa12.06□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Sh3yl1O08641 340 aa12.06□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Rdh5O55240 318 aa12.06□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Smpd2O70572 419 aa12.06□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Fabp3P11404 133 aa12.06□□□□□ -0.48
Rnf4-201ENSMUST00000030992 RabggtbP53612 339 aa12.06□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Tas2r7P59530 312 aa12.06□□□□□ -0.48
Rnf4-201ENSMUST00000030992 SgcgP82348 291 aa12.06□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Ptpn2Q06180 406 aa12.06□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Dmrtc1bQ2PMX6 267 aa12.06□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Mrpl10Q3TBW2 262 aaKnown RBP12.06□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Qsox2Q3TMX7 692 aa12.06□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Ulk3Q3U3Q1 472 aa12.06□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Itgb2lQ3UV74 738 aa12.06□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Klra2Q60660 288 aa12.06□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Bend6Q6PFX2 281 aa12.06□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Adamtsl2Q7TSK7 957 aa12.06□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Znf592Q8BHZ4 1262 aa12.06□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Ugt2a3Q8BWQ1 534 aa12.06□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Guf1Q8C3X4 651 aaKnown RBP12.06□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Rnf222Q8CEF8 211 aa12.06□□□□□ -0.48
Rnf4-201ENSMUST00000030992 ScgnQ91WD9 276 aa12.06□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Asb6Q91ZU1 418 aa12.06□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Txndc9Q9CQ79 226 aa12.06□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Glipr1Q9CWG1 255 aa12.06□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Fam96aQ9DCL2 160 aa12.06□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Myg1Q9JK81 380 aa12.06□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Uba2Q9Z1F9 638 aa12.06□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Tcrg-V3A0A0G2JEW2 117 aa12.06□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Zbtb34A2ATY4 518 aa12.06□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Olfr74A2BHP6 318 aa12.06□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Vmn1r168K7N6B6 309 aa12.06□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Tuba1bP05213 451 aa12.06□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Cst3P21460 140 aa12.06□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Tuba1aP68369 451 aa12.06□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Rpl10lP86048 214 aaKnown RBP12.06□□□□□ -0.48
Rnf4-201ENSMUST00000030992 LvrnQ2KHK3 559 aa12.06□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Cnpy1Q4VAB4 94 aa12.06□□□□□ -0.48
Rnf4-201ENSMUST00000030992 C2cd4cC2CD4Q5HZI2 419 aa12.06□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Krba1Q6NXZ1 1043 aa12.06□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Mfn2Q80U63 757 aa12.06□□□□□ -0.48
Rnf4-201ENSMUST00000030992 CptpQ8BS40 216 aa12.06□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Snx16Q8C080 344 aa12.06□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 30.8 ms