RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Cd83O88324 196 aa12.19□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Mup11P04938 181 aa12.19□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Gm21320Q4FZE8 181 aa12.19□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Ankrd28Q505D1 1053 aa12.19□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Olfr318Q5NCD7 306 aa12.19□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Cox8aQ64445 69 aa12.19□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Zc3h11aQ6NZF1 792 aaKnown RBP12.19□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Gpr176Q80WT4 515 aa12.19□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Nmral1Q8K2T1 309 aa12.19□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Tmem185bQ8R3R5 350 aa12.19□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Tssk6Q925K9 273 aa12.19□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Col25a1Q99MQ5 666 aa12.19□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Mrps18bQ99N84 254 aa12.19□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Mbd3l1Q9D9H3 186 aa12.19□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Ilf3Q9Z1X4 898 aaKnown RBP12.19□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Gm7951E9Q0A2 213 aa12.19□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Gm6482F6YHC1 213 aa12.19□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Gm17124F6ZIG1 213 aa12.19□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Gm14139F6ZS36 494 aa12.19□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Vmn2r52L7N2B2 852 aa12.19□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Cpt1aP97742 773 aa12.19□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Chsy3Q5DTK1 884 aa12.19□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Chst9Q76EC5 413 aa12.19□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Slc45a1Q8BIV7 751 aa12.19□□□□□ -0.46
Clcn3-201ENSMUST00000004430 BC024139Q8BVJ3 772 aa12.19□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Fam161aQ8QZV6 448 aa12.19□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Olfr398Q8VFY0 314 aa12.19□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Olfr649Q8VGW1 312 aa12.19□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Trmt5Q9D0C4 501 aa12.19□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Ccdc3Q9D6Y1 273 aa12.19□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Nqo2Q9JI75 231 aa12.19□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Gm12695A2AGB2 545 aa12.19□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Glb1l3A2RSQ1 649 aa12.19□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Sac3d1A6H687 427 aa12.19□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Vmn1r58G3X9U3 310 aa12.19□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Ubl4aP21126 157 aaKnown RBP12.19□□□□□ -0.46
Clcn3-201ENSMUST00000004430 StsP50427 624 aa12.19□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Hoxd13P70217 339 aa12.19□□□□□ -0.46
Clcn3-201ENSMUST00000004430 CdonQ32MD9 1250 aa12.19□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Rbm45Q8BHN5 476 aaKnown RBP12.19□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Qrsl1Q9CZN8 525 aa12.19□□□□□ -0.46
Clcn3-201ENSMUST00000004430 4930578G10RikQ9D4Q4 153 aa12.19□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Mfsd2aQ9DA75 534 aa12.19□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Xylt2Q9EPL0 865 aa12.19□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Ropn1lQ9EQ00 218 aa12.19□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Olfr2Q9QWU6 327 aa12.19□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Itgb6Q9Z0T9 787 aa12.19□□□□□ -0.46
Clcn3-201ENSMUST00000004430 4930433I11RikA0A0U1RPT6 723 aa12.19□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Xpnpep2B1AVD1 674 aa12.19□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Brd7O88665 651 aaKnown RBP12.19□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Hoxa9P09631 271 aa12.19□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Tia1P52912 386 aaKnown RBP12.19□□□□□ -0.46
Clcn3-201ENSMUST00000004430 SmsP97355 366 aa12.19□□□□□ -0.46
Clcn3-201ENSMUST00000004430 PrkczQ02956 592 aa12.19□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Khdc4Q3TCX3 612 aa12.19□□□□□ -0.46
Clcn3-201ENSMUST00000004430 OclnQ61146 521 aa12.19□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Bhlhb9Q6PB60 539 aa12.19□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Tm7sf2Q71KT5 418 aa12.19□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Olfr855Q7TRF8 312 aa12.19□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Cox15Q8BJ03 413 aa12.19□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Gen1Q8BMI4 908 aa12.19□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Arfrp1Q8BXL7 201 aa12.19□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Tgm4Q8BZH1 670 aa12.19□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Pdcd10Q8VE70 212 aa12.19□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Mat2bQ99LB6 334 aa12.19□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Cmtm3Q99LJ5 184 aa12.19□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Tex46Q9CPU3 165 aa12.19□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Praf2Q9JIG8 178 aa12.19□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Shroom3Q9QXN0 1986 aa12.18□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Chrna10B2RX82 447 aa12.18□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Adam19O35674 920 aa12.18□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Mid1O70583 680 aa12.18□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Ptger4P32240 513 aa12.18□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Atxn1P54254 791 aa12.18□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Aqp2P56402 271 aa12.18□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Neurog1P70660 244 aa12.18□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Apoc2Q05020 97 aa12.18□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Brf2Q3UAW9 420 aa12.18□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Acvr1bQ61271 505 aa12.18□□□□□ -0.46
Clcn3-201ENSMUST00000004430 AktipQ64362 292 aa12.18□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Vangl1Q80Z96 526 aa12.18□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Olfml2aQ8BHP7 681 aa12.18□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Rnf121Q8R1Z9 327 aa12.18□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Mtmr14Q8VEL2 648 aa12.18□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Olfr700Q8VFM5 316 aa12.18□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Olfr643Q8VGY1 314 aa12.18□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Creb3l4Q9D2A5 370 aa12.18□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Upf1Q9EPU0 1124 aaKnown RBP12.18□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Gm21149A0A0G2JFY7 255 aa12.18□□□□□ -0.46
Clcn3-201ENSMUST00000004430 4930426L09RikE9Q0N7 123 aa12.18□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Speer4eK7N6S8 255 aa12.18□□□□□ -0.46
Clcn3-201ENSMUST00000004430 P01670 111 aa12.18□□□□□ -0.46
Clcn3-201ENSMUST00000004430 P01671 111 aa12.18□□□□□ -0.46
Clcn3-201ENSMUST00000004430 P01672 111 aa12.18□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Zp2P20239 713 aa12.18□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Hoxc5P32043 222 aa12.18□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Gstm5P48774 224 aa12.18□□□□□ -0.46
Clcn3-201ENSMUST00000004430 CntfP51642 198 aa12.18□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Rit1P70426 219 aa12.18□□□□□ -0.46
Clcn3-201ENSMUST00000004430 Bhlha9Q5RJB0 231 aa12.18□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 28.5 ms