RNA–Protein interactions for RNA: YOL138C

RTC1, Transcript of Subunit of the SEA (Seh1-associated) complex, yeast

Gene RTC1, Length 4,026 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RTC1	YOL138C	SPE3	Q12074	293 aa	Known RBP	4.92	□□□□□ -1.62
RTC1	YOL138C	EAF5	P39995	279 aa		4.91	□□□□□ -1.62
RTC1	YOL138C	COG4	Q06096	861 aa		4.91	□□□□□ -1.62
RTC1	YOL138C	MED1	Q12321	566 aa		4.91	□□□□□ -1.62
RTC1	YOL138C	NAT1	P12945	854 aa	Known RBP	4.91	□□□□□ -1.62
RTC1	YOL138C	YFL034W	P43564	1073 aa		4.91	□□□□□ -1.62
RTC1	YOL138C	TCO89	Q08921	799 aa		4.91	□□□□□ -1.62
RTC1	YOL138C	YPL277C	Q08989	487 aa		4.91	□□□□□ -1.62
RTC1	YOL138C	PTC5	Q12511	572 aa		4.91	□□□□□ -1.62
RTC1	YOL138C	RGD1	P38339	666 aa		4.91	□□□□□ -1.62
RTC1	YOL138C	ESL1	P40456	1118 aa		4.91	□□□□□ -1.62
RTC1	YOL138C	SGT2	Q12118	346 aa	Known RBP	4.91	□□□□□ -1.62
RTC1	YOL138C	VMA1	P17255	1071 aa	Known RBP	4.9	□□□□□ -1.62
RTC1	YOL138C	RPT1	P33299	467 aa	Known RBP	4.9	□□□□□ -1.62
RTC1	YOL138C	FLR1	P38124	548 aa		4.9	□□□□□ -1.62
RTC1	YOL138C	CCT5	P40413	562 aa	Known RBP	4.9	□□□□□ -1.62
RTC1	YOL138C	FIG4	P42837	879 aa		4.9	□□□□□ -1.62
RTC1	YOL138C	SSB1	P11484	613 aa	Known RBP	4.9	□□□□□ -1.62
RTC1	YOL138C	TMT1	P32643	299 aa		4.9	□□□□□ -1.62
RTC1	YOL138C	NDT80	P38830	627 aa		4.9	□□□□□ -1.62
RTC1	YOL138C	SSB2	P40150	613 aa	Known RBP	4.9	□□□□□ -1.62
RTC1	YOL138C	LAM5	P43560	674 aa		4.9	□□□□□ -1.62
RTC1	YOL138C	RPS7B	P48164	190 aa	Known RBP	4.9	□□□□□ -1.62
RTC1	YOL138C	RTT102	P53330	157 aa		4.9	□□□□□ -1.62
RTC1	YOL138C	RLF2	Q12495	606 aa		4.9	□□□□□ -1.62
RTC1	YOL138C	URA1	P28272	314 aa	Predicted RBP	4.9	□□□□□ -1.63
RTC1	YOL138C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	4.9	□□□□□ -1.63	not detected
RTC1	YOL138C	YGL039W	P53183	348 aa	Known RBP	4.9	□□□□□ -1.63
RTC1	YOL138C	YNL134C	P53912	376 aa	Known RBP	4.9	□□□□□ -1.63
RTC1	YOL138C	AIM33	Q04516	312 aa		4.9	□□□□□ -1.63
RTC1	YOL138C	OXR1	Q08952	273 aa		4.9	□□□□□ -1.63
RTC1	YOL138C	CDC53	Q12018	815 aa	Known RBP	4.9	□□□□□ -1.63
RTC1	YOL138C	TRM2	P33753	639 aa		4.89	□□□□□ -1.63
RTC1	YOL138C	MMS4	P38257	691 aa		4.89	□□□□□ -1.63
RTC1	YOL138C	SLX1	P38324	304 aa		4.89	□□□□□ -1.63
RTC1	YOL138C	EFM2	P38347	419 aa		4.89	□□□□□ -1.63
RTC1	YOL138C	YHR202W	P38887	602 aa		4.89	□□□□□ -1.63
RTC1	YOL138C	LSB6	P42951	607 aa		4.89	□□□□□ -1.63
RTC1	YOL138C	YGR273C	P53329	174 aa		4.89	□□□□□ -1.63
RTC1	YOL138C	HEH2	Q03281	663 aa		4.89	□□□□□ -1.63
RTC1	YOL138C	ERV41	Q04651	352 aa		4.89	□□□□□ -1.63
RTC1	YOL138C	IES4	Q08561	116 aa		4.89	□□□□□ -1.63
RTC1	YOL138C	DED1	P06634	604 aa	Known RBP	4.89	□□□□□ -1.63
RTC1	YOL138C	ATP1	P07251	545 aa	Known RBP	4.89	□□□□□ -1.63
RTC1	YOL138C	RDS1	P25611	832 aa		4.89	□□□□□ -1.63
RTC1	YOL138C	YHR054C	P38780	354 aa		4.89	□□□□□ -1.63
RTC1	YOL138C	MET13	P53128	600 aa		4.89	□□□□□ -1.63
RTC1	YOL138C	PGA2	P53903	129 aa		4.89	□□□□□ -1.63
RTC1	YOL138C	PUS1	Q12211	544 aa	Known RBP	4.89	□□□□□ -1.63
RTC1	YOL138C	RGP1	P16664	663 aa		4.89	□□□□□ -1.63
RTC1	YOL138C	KGD2	P19262	463 aa	Predicted RBP	4.89	□□□□□ -1.63
RTC1	YOL138C	CYS3	P31373	394 aa	Known RBP	4.89	□□□□□ -1.63
RTC1	YOL138C	MNN4	P36044	1178 aa		4.89	□□□□□ -1.63
RTC1	YOL138C	FTR1	P40088	404 aa		4.89	□□□□□ -1.63
RTC1	YOL138C	CIR1	P42940	261 aa		4.89	□□□□□ -1.63
RTC1	YOL138C	NPA3	P47122	385 aa		4.89	□□□□□ -1.63
RTC1	YOL138C	VPS72	Q03388	795 aa		4.89	□□□□□ -1.63
RTC1	YOL138C	YLR455W	Q06188	304 aa		4.89	□□□□□ -1.63
RTC1	YOL138C	GPI13	Q07830	1017 aa		4.89	□□□□□ -1.63
RTC1	YOL138C	CIR2	Q08822	631 aa		4.89	□□□□□ -1.63
RTC1	YOL138C	YEL076C-A	P0CX16	216 aa		4.88	□□□□□ -1.63
RTC1	YOL138C	YLR464W	P0CX17	216 aa		4.88	□□□□□ -1.63
RTC1	YOL138C	PFK1	P16861	987 aa	Known RBP	4.88	□□□□□ -1.63
RTC1	YOL138C	GLN3	P18494	730 aa		4.88	□□□□□ -1.63
RTC1	YOL138C	DID4	P36108	232 aa		4.88	□□□□□ -1.63
RTC1	YOL138C	APN2	P38207	520 aa		4.88	□□□□□ -1.63
RTC1	YOL138C	YEL076C	P39971	216 aa		4.88	□□□□□ -1.63
RTC1	YOL138C	TFG2	P41896	400 aa	Predicted RBP	4.88	□□□□□ -1.63
RTC1	YOL138C	BRE2	P43132	505 aa		4.88	□□□□□ -1.63
RTC1	YOL138C	DAS1	P47005	663 aa		4.88	□□□□□ -1.63
RTC1	YOL138C	YJL045W	P47052	634 aa		4.88	□□□□□ -1.63
RTC1	YOL138C	SGM1	P47166	707 aa		4.88	□□□□□ -1.63
RTC1	YOL138C	CSR1	Q06705	408 aa	Known RBP	4.88	□□□□□ -1.63
RTC1	YOL138C	HAP2	P06774	265 aa		4.88	□□□□□ -1.63
RTC1	YOL138C	ISY1	P21374	235 aa	Predicted RBP	4.88	□□□□□ -1.63
RTC1	YOL138C	EBP2	P36049	427 aa	Known RBP	4.88	□□□□□ -1.63
RTC1	YOL138C	OYE3	P41816	400 aa	Predicted RBP	4.88	□□□□□ -1.63
RTC1	YOL138C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.88	□□□□□ -1.63	not detected
RTC1	YOL138C	HMT1	P38074	348 aa		4.88	□□□□□ -1.63
RTC1	YOL138C	SMC3	P47037	1230 aa		4.88	□□□□□ -1.63
RTC1	YOL138C	DOT1	Q04089	582 aa	Known RBP	4.88	□□□□□ -1.63
RTC1	YOL138C	DNL4	Q08387	944 aa	Predicted RBP	4.88	□□□□□ -1.63
RTC1	YOL138C	TUF1	P02992	437 aa	Known RBP	4.88	□□□□□ -1.63
RTC1	YOL138C	MET4	P32389	672 aa		4.88	□□□□□ -1.63
RTC1	YOL138C	STB5	P38699	743 aa		4.88	□□□□□ -1.63
RTC1	YOL138C	ORC6	P38826	435 aa		4.88	□□□□□ -1.63
RTC1	YOL138C	KAP123	P40069	1113 aa	Known RBP	4.88	□□□□□ -1.63
RTC1	YOL138C	GCV2	P49095	1034 aa		4.88	□□□□□ -1.63
RTC1	YOL138C	GIS3	Q12418	502 aa		4.88	□□□□□ -1.63
RTC1	YOL138C	VPS1	P21576	704 aa	Known RBP	4.87	□□□□□ -1.63
RTC1	YOL138C	YEL023C	P39992	682 aa		4.87	□□□□□ -1.63
RTC1	YOL138C	CCM1	P48237	864 aa	Predicted RBP	4.87	□□□□□ -1.63
RTC1	YOL138C	SPO71	Q03868	1245 aa		4.87	□□□□□ -1.63
RTC1	YOL138C	EIS1	Q05050	843 aa	Known RBP	4.87	□□□□□ -1.63
RTC1	YOL138C	VTC3	Q02725	835 aa		4.87	□□□□□ -1.63
RTC1	YOL138C	YDL073W	Q07454	984 aa		4.87	□□□□□ -1.63
RTC1	YOL138C	RAD54	P32863	898 aa		4.87	□□□□□ -1.63
RTC1	YOL138C	YNR014W	P53719	212 aa		4.87	□□□□□ -1.63
RTC1	YOL138C	YNL146W	P53906	100 aa		4.87	□□□□□ -1.63
RTC1	YOL138C	RPA49	Q01080	415 aa	Predicted RBP	4.87	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 31.3 ms